Move unreleased changes to v0.4.4

Generated with poetry export:

    $ poetry export --without-hashes -f requirements.txt > requirements.txt
    $ poetry export --without-hashes --dev -f requirements.txt > requirements-dev.txt

I am trying `--without-hashes` to work around an error on pip install
when running in CI:

    ERROR: In --require-hashes mode, all requirements must have their versions pinned with ==.

.build.yml

@@ -1,15 +0,0 @@
-image: archlinux
-packages:
-  - python-poetry
-sources:
-  - https://git.sr.ht/~alanorth/csv-metadata-quality
-tasks:
-  - setup: |
-      cd csv-metadata-quality
-      poetry install
-  - pytest: |
-      cd csv-metadata-quality
-      poetry run pytest
-  - testcli: |
-      cd csv-metadata-quality
-      poetry run csv-metadata-quality -i data/test.csv -o /tmp/test.csv -e -u --agrovoc-fields dc.subject,cg.coverage.country

.drone.yml

@@ -46,20 +46,4 @@ steps:
   - python setup.py install
   - csv-metadata-quality -i data/test.csv -o /tmp/test.csv -e -u --agrovoc-fields dc.subject,cg.coverage.country
 
----
-kind: pipeline
-type: docker
-name: python36
-
-steps:
-- name: test
-  image: python:3.6-slim
-  commands:
-  - id
-  - python -V
-  - pip install -r requirements-dev.txt
-  - pytest
-  - python setup.py install
-  - csv-metadata-quality -i data/test.csv -o /tmp/test.csv -e -u --agrovoc-fields dc.subject,cg.coverage.country
-
 # vim: ts=2 sw=2 et

CHANGELOG.md

@@ -4,12 +4,25 @@ All notable changes to this project will be documented in this file.
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
-## Unreleased
+## [0.4.4] - 2021-02-21
+### Added
+- Accept dates formatted in ISO 8601 extended with combined date and time, for
+example: 2020-08-31T11:04:56Z
+- Colorized output: red for errors, yellow for warnings and information, green
+for changes
+
+### Updated
+- Run `poetry update` to update project dependencies
+
+## [0.4.3] - 2021-01-26
 ### Changed
 - Reformat with black
+- Requires Python 3.7+ for pandas 1.2.0
 
 ### Updated
 - Run `poetry update`
+- Expand check/fix for multi-value separators to include metadata with invalid
+separators at the end, for example "Kenya||Tanzania||"
 
 ## [0.4.2] - 2020-07-06
 ### Changed

README.md

@@ -1,7 +1,11 @@
-# CSV Metadata Quality ![GitHub Actions](https://github.com/ilri/csv-metadata-quality/workflows/Build%20and%20Test/badge.svg) [![builds.sr.ht status](https://builds.sr.ht/~alanorth/csv-metadata-quality.svg)](https://builds.sr.ht/~alanorth/csv-metadata-quality?)
-A simple, but opinionated metadata quality checker and fixer designed to work with CSVs in the DSpace ecosystem (though it could theoretically work on any CSV that uses Dublin Core fields as columns). The implementation is essentially a pipeline of checks and fixes that begins with splitting multi-value fields on the standard DSpace "||" separator, trimming leading/trailing whitespace, and then proceeding to more specialized cases like ISSNs, ISBNs, languages, etc.
+# DSpace CSV Metadata Quality Checker ![GitHub Actions](https://github.com/ilri/csv-metadata-quality/workflows/Build%20and%20Test/badge.svg) [![Build Status](https://ci.mjanja.ch/api/badges/alanorth/csv-metadata-quality/status.svg)](https://ci.mjanja.ch/alanorth/csv-metadata-quality)
+A simple, but opinionated metadata quality checker and fixer designed to work with CSVs in the DSpace ecosystem (though it could theoretically work on any CSV that uses Dublin Core fields as columns). The implementation is essentially a pipeline of checks and fixes that begins with splitting multi-value fields on the standard DSpace "||" separator, trimming leading/trailing whitespace, and then proceeding to more specialized cases like ISSNs, ISBNs, languages, unnecessary Unicode, AGROVOC terms, etc.
 
-Requires Python 3.6 or greater (3.8 recommended). CSV and Excel support comes from the [Pandas](https://pandas.pydata.org/) library, though your mileage may vary with Excel because this is much less tested.
+Requires Python 3.7 or greater (3.8 recommended). CSV and Excel support comes from the [Pandas](https://pandas.pydata.org/) library, though your mileage may vary with Excel because this is much less tested.
+
+If you use the DSpace CSV metadata quality checker please cite:
+
+*Orth, A. 2019. DSpace CSV metadata quality checker. Nairobi, Kenya: ILRI. https://hdl.handle.net/10568/110997.*
 
 ## Functionality
 
@@ -10,7 +14,7 @@ Requires Python 3.6 or greater (3.8 recommended). CSV and Excel support comes fr
 - Experimental validation of titles and abstracts against item's Dublin Core language field
 - Validate subjects against the AGROVOC REST API (see the `--agrovoc-fields` option)
 - Fix leading, trailing, and excessive (ie, more than one) whitespace
-- Fix invalid multi-value separators (`|`) using `--unsafe-fixes`
+- Fix invalid and unnecessary multi-value separators (`|`) using `--unsafe-fixes`
 - Fix problematic newlines (line feeds) using `--unsafe-fixes`
 - Remove unnecessary Unicode like [non-breaking spaces](https://en.wikipedia.org/wiki/Non-breaking_space), [replacement characters](https://en.wikipedia.org/wiki/Specials_(Unicode_block)#Replacement_character), etc
 - Check for "suspicious" characters that indicate encoding or copy/paste issues, for example "foreˆt" should be "forêt"
@@ -56,6 +60,8 @@ You can enable several "unsafe" fixes with the `--unsafe-fixes` option. Currentl
 ### Invalid Multi-Value Separators
 This is considered "unsafe" because it is *theoretically* possible for a single `|` character to be used legitimately in a metadata value, though in my experience it is always a typo. For example, if a user mistakenly writes `Kenya|Tanzania` when attempting to indicate two countries, the result will be one metadata value with the literal text `Kenya|Tanzania`. The `--unsafe-fixes` option will correct the invalid multi-value separator so that there are two metadata values, ie `Kenya||Tanzania`.
 
+This will also remove unnecessary trailing multi-value separators, for example `Kenya||Tanzania||`.
+
 ### Newlines
 This is considered "unsafe" because some systems give special importance to vertical space and render it properly. DSpace does not support rendering newlines in its XMLUI and has, at times, suffered from parsing errors that cause the import process to fail if an input file had newlines. The `--unsafe-fixes` option strips Unix line feeds (U+000A).
 

csv_metadata_quality/app.py

@@ -4,6 +4,7 @@ import signal
 import sys
 
 import pandas as pd
+from colorama import Fore
 
 import csv_metadata_quality.check as check
 import csv_metadata_quality.experimental as experimental
@@ -77,7 +78,7 @@ def run(argv):
                 if column == exclude and skip is False:
                     skip = True
             if skip:
-                print(f"Skipping {column}")
+                print(f"{Fore.YELLOW}Skipping {Fore.RESET}{column}")
 
                 continue
 
@@ -103,13 +104,13 @@ def run(argv):
         # Fix: unnecessary Unicode
         df[column] = df[column].apply(fix.unnecessary_unicode)
 
-        # Check: invalid multi-value separator
+        # Check: invalid and unnecessary multi-value separators
         df[column] = df[column].apply(check.separators, field_name=column)
 
         # Check: suspicious characters
         df[column] = df[column].apply(check.suspicious_characters, field_name=column)
 
-        # Fix: invalid multi-value separator
+        # Fix: invalid and unnecessary multi-value separators
         if args.unsafe_fixes:
             df[column] = df[column].apply(fix.separators, field_name=column)
             # Run whitespace fix again after fixing invalid separators

csv_metadata_quality/check.py

@@ -3,6 +3,7 @@ from datetime import datetime, timedelta
 import pandas as pd
 import requests
 import requests_cache
+from colorama import Fore
 from pycountry import languages
 
 
@@ -26,7 +27,7 @@ def issn(field):
     for value in field.split("||"):
 
         if not issn.is_valid(value):
-            print(f"Invalid ISSN: {value}")
+            print(f"{Fore.RED}Invalid ISSN: {Fore.RESET}{value}")
 
     return field
 
@@ -51,13 +52,17 @@ def isbn(field):
     for value in field.split("||"):
 
         if not isbn.is_valid(value):
-            print(f"Invalid ISBN: {value}")
+            print(f"{Fore.RED}Invalid ISBN: {Fore.RESET}{value}")
 
     return field
 
 
 def separators(field, field_name):
-    """Check for invalid multi-value separators (ie "|" or "|||").
+    """Check for invalid and unnecessary multi-value separators, for example:
+
+        value|value
+        value|||value
+        value||value||
 
     Prints the field with the invalid multi-value separator.
     """
@@ -70,12 +75,22 @@ def separators(field, field_name):
 
     # Try to split multi-value field on "||" separator
     for value in field.split("||"):
+        # Check if the current value is blank
+        if value == "":
+            print(
+                f"{Fore.RED}Unnecessary multi-value separator ({field_name}): {Fore.RESET}{field}"
+            )
+
+            continue
 
         # After splitting, see if there are any remaining "|" characters
         match = re.findall(r"^.*?\|.*$", value)
 
+        # Check if there was a match
         if match:
-            print(f"Invalid multi-value separator ({field_name}): {field}")
+            print(
+                f"{Fore.RED}Invalid multi-value separator ({field_name}): {Fore.RESET}{field}"
+            )
 
     return field
 
@@ -92,7 +107,7 @@ def date(field, field_name):
     """
 
     if pd.isna(field):
-        print(f"Missing date ({field_name}).")
+        print(f"{Fore.RED}Missing date ({field_name}).{Fore.RESET}")
 
         return
 
@@ -101,7 +116,9 @@ def date(field, field_name):
 
     # We don't allow multi-value date fields
     if len(multiple_dates) > 1:
-        print(f"Multiple dates not allowed ({field_name}): {field}")
+        print(
+            f"{Fore.RED}Multiple dates not allowed ({field_name}): {Fore.RESET}{field}"
+        )
 
         return field
 
@@ -127,7 +144,15 @@ def date(field, field_name):
 
         return field
     except ValueError:
-        print(f"Invalid date ({field_name}): {field}")
+        pass
+
+    try:
+        # Check if date is valid YYYY-MM-DDTHH:MM:SSZ format
+        datetime.strptime(field, "%Y-%m-%dT%H:%M:%SZ")
+
+        return field
+    except ValueError:
+        print(f"{Fore.RED}Invalid date ({field_name}): {Fore.RESET}{field}")
 
         return field
 
@@ -160,9 +185,7 @@ def suspicious_characters(field, field_name):
             # character and spanning enough of the rest to give a preview,
             # but not too much to cause the line to break in terminals with
             # a default of 80 characters width.
-            suspicious_character_msg = (
-                f"Suspicious character ({field_name}): {field_subset}"
-            )
+            suspicious_character_msg = f"{Fore.YELLOW}Suspicious character ({field_name}): {Fore.RESET}{field_subset}"
             print(f"{suspicious_character_msg:1.80}")
 
     return field
@@ -187,16 +210,16 @@ def language(field):
         # can check it against ISO 639-1 or ISO 639-3 accordingly.
         if len(value) == 2:
             if not languages.get(alpha_2=value):
-                print(f"Invalid ISO 639-1 language: {value}")
+                print(f"{Fore.RED}Invalid ISO 639-1 language: {Fore.RESET}{value}")
 
                 pass
         elif len(value) == 3:
             if not languages.get(alpha_3=value):
-                print(f"Invalid ISO 639-3 language: {value}")
+                print(f"{Fore.RED}Invalid ISO 639-3 language: {Fore.RESET}{value}")
 
                 pass
         else:
-            print(f"Invalid language: {value}")
+            print(f"{Fore.RED}Invalid language: {Fore.RESET}{value}")
 
     return field
 
@@ -238,7 +261,7 @@ def agrovoc(field, field_name):
 
             # check if there are any results
             if len(data["results"]) == 0:
-                print(f"Invalid AGROVOC ({field_name}): {value}")
+                print(f"{Fore.RED}Invalid AGROVOC ({field_name}): {Fore.RESET}{value}")
 
     return field
 
@@ -291,6 +314,6 @@ def filename_extension(field):
                 break
 
         if filename_extension_match is False:
-            print(f"Filename with uncommon extension: {value}")
+            print(f"{Fore.YELLOW}Filename with uncommon extension: {Fore.RESET}{value}")
 
     return field

csv_metadata_quality/experimental.py

@@ -1,4 +1,5 @@
 import pandas as pd
+from colorama import Fore
 
 
 def correct_language(row):
@@ -10,10 +11,11 @@ def correct_language(row):
     language and returns the value in the language field if it does match.
     """
 
-    from pycountry import languages
-    import langid
     import re
 
+    import langid
+    from pycountry import languages
+
     # Initialize some variables at global scope so that we can set them in the
     # loop scope below and still be able to access them afterwards.
     language = ""
@@ -83,12 +85,12 @@ def correct_language(row):
     detected_language = languages.get(alpha_2=langid_classification[0])
     if len(language) == 2 and language != detected_language.alpha_2:
         print(
-            f"Possibly incorrect language {language} (detected {detected_language.alpha_2}): {title}"
+            f"{Fore.YELLOW}Possibly incorrect language {language} (detected {detected_language.alpha_2}): {Fore.RESET}{title}"
         )
 
     elif len(language) == 3 and language != detected_language.alpha_3:
         print(
-            f"Possibly incorrect language {language} (detected {detected_language.alpha_3}): {title}"
+            f"{Fore.YELLOW}Possibly incorrect language {language} (detected {detected_language.alpha_3}): {Fore.RESET}{title}"
         )
 
     else:

csv_metadata_quality/fix.py

@@ -2,6 +2,7 @@ import re
 from unicodedata import normalize
 
 import pandas as pd
+from colorama import Fore
 
 from csv_metadata_quality.util import is_nfc
 
@@ -29,7 +30,9 @@ def whitespace(field, field_name):
         match = re.findall(pattern, value)
 
         if match:
-            print(f"Removing excessive whitespace ({field_name}): {value}")
+            print(
+                f"{Fore.GREEN}Removing excessive whitespace ({field_name}): {Fore.RESET}{value}"
+            )
             value = re.sub(pattern, " ", value)
 
         # Save cleaned value
@@ -42,7 +45,14 @@ def whitespace(field, field_name):
 
 
 def separators(field, field_name):
-    """Fix for invalid multi-value separators (ie "|")."""
+    """Fix for invalid and unnecessary multi-value separators, for example:
+
+        value|value
+        value|||value
+        value||value||
+
+    Prints the field with the invalid multi-value separator.
+    """
 
     # Skip fields with missing values
     if pd.isna(field):
@@ -53,12 +63,22 @@ def separators(field, field_name):
 
     # Try to split multi-value field on "||" separator
     for value in field.split("||"):
+        # Check if the value is blank and skip it
+        if value == "":
+            print(
+                f"{Fore.GREEN}Fixing unnecessary multi-value separator ({field_name}): {Fore.RESET}{field}"
+            )
+
+            continue
+
         # After splitting, see if there are any remaining "|" characters
         pattern = re.compile(r"\|")
         match = re.findall(pattern, value)
 
         if match:
-            print(f"Fixing invalid multi-value separator ({field_name}): {value}")
+            print(
+                f"{Fore.RED}Fixing invalid multi-value separator ({field_name}): {Fore.RESET}{value}"
+            )
 
             value = re.sub(pattern, "||", value)
 
@@ -94,7 +114,7 @@ def unnecessary_unicode(field):
     match = re.findall(pattern, field)
 
     if match:
-        print(f"Removing unnecessary Unicode (U+200B): {field}")
+        print(f"{Fore.GREEN}Removing unnecessary Unicode (U+200B): {Fore.RESET}{field}")
         field = re.sub(pattern, "", field)
 
     # Check for replacement characters (U+FFFD)
@@ -102,7 +122,7 @@ def unnecessary_unicode(field):
     match = re.findall(pattern, field)
 
     if match:
-        print(f"Removing unnecessary Unicode (U+FFFD): {field}")
+        print(f"{Fore.GREEN}Removing unnecessary Unicode (U+FFFD): {Fore.RESET}{field}")
         field = re.sub(pattern, "", field)
 
     # Check for no-break spaces (U+00A0)
@@ -110,7 +130,9 @@ def unnecessary_unicode(field):
     match = re.findall(pattern, field)
 
     if match:
-        print(f"Replacing unnecessary Unicode (U+00A0): {field}")
+        print(
+            f"{Fore.GREEN}Replacing unnecessary Unicode (U+00A0): {Fore.RESET}{field}"
+        )
         field = re.sub(pattern, " ", field)
 
     # Check for soft hyphens (U+00AD), sometimes preceeded with a normal hyphen
@@ -118,7 +140,9 @@ def unnecessary_unicode(field):
     match = re.findall(pattern, field)
 
     if match:
-        print(f"Replacing unnecessary Unicode (U+00AD): {field}")
+        print(
+            f"{Fore.GREEN}Replacing unnecessary Unicode (U+00AD): {Fore.RESET}{field}"
+        )
         field = re.sub(pattern, "-", field)
 
     return field
@@ -143,7 +167,9 @@ def duplicates(field, field_name):
         if value not in new_values:
             new_values.append(value)
         else:
-            print(f"Removing duplicate value ({field_name}): {value}")
+            print(
+                f"{Fore.GREEN}Removing duplicate value ({field_name}): {Fore.RESET}{value}"
+            )
 
     # Create a new field consisting of all values joined with "||"
     new_field = "||".join(new_values)
@@ -176,7 +202,7 @@ def newlines(field):
     match = re.findall(r"\n", field)
 
     if match:
-        print(f"Removing newline: {field}")
+        print(f"{Fore.GREEN}Removing newline: {Fore.RESET}{field}")
         field = field.replace("\n", "")
 
     return field
@@ -200,7 +226,9 @@ def comma_space(field, field_name):
     match = re.findall(r",\w", field)
 
     if match:
-        print(f"Adding space after comma ({field_name}): {field}")
+        print(
+            f"{Fore.GREEN}Adding space after comma ({field_name}): {Fore.RESET}{field}"
+        )
         field = re.sub(r",(\w)", r", \1", field)
 
     return field
@@ -221,7 +249,7 @@ def normalize_unicode(field, field_name):
 
     # Check if the current string is using normalized Unicode (NFC)
     if not is_nfc(field):
-        print(f"Normalizing Unicode ({field_name}): {field}")
+        print(f"{Fore.GREEN}Normalizing Unicode ({field_name}): {Fore.RESET}{field}")
         field = normalize("NFC", field)
 
     return field

csv_metadata_quality/version.py

@@ -1 +1 @@
-VERSION = "0.4.2"
+VERSION = "0.4.4"

data/test.csv

@@ -28,3 +28,4 @@ Incorrect ISO 639-1 language,2019-09-26,,,es,,,
 Incorrect ISO 639-3 language,2019-09-26,,,spa,,,
 Composéd Unicode,2020-01-14,,,,,,
 Decomposéd Unicode,2020-01-14,,,,,,
+Unnecessary multi-value separator,2021-01-03,0378-5955||,,,,,

poetry.lock

@@ -62,12 +62,11 @@ python-versions = "*"
 
 [[package]]
 name = "appnope"
-version = "0.1.0"
-description = "Disable App Nap on OS X 10.9"
+version = "0.1.2"
+description = "Disable App Nap on macOS >= 10.9"
 category = "dev"
 optional = false
 python-versions = "*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\" and sys_platform == \"darwin\""
 
 [[package]]
 name = "atomicwrites"
@@ -76,25 +75,24 @@ description = "Atomic file writes."
 category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
-marker = "sys_platform == \"win32\""
 
 [[package]]
 name = "attrs"
-version = "20.2.0"
+version = "20.3.0"
 description = "Classes Without Boilerplate"
 category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [package.extras]
-dev = ["coverage (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface", "sphinx", "sphinx-rtd-theme", "pre-commit"]
-docs = ["sphinx", "sphinx-rtd-theme", "zope.interface"]
-tests = ["coverage (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface"]
-tests_no_zope = ["coverage (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six"]
+dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface", "furo", "sphinx", "pre-commit"]
+docs = ["furo", "sphinx", "zope.interface"]
+tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface"]
+tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six"]
 
 [[package]]
 name = "babel"
-version = "2.8.0"
+version = "2.9.0"
 description = "Internationalization utilities"
 category = "dev"
 optional = false
@@ -110,7 +108,6 @@ description = "Specifications for callback functions passed in to an API"
 category = "dev"
 optional = false
 python-versions = "*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
 
 [[package]]
 name = "black"
@@ -120,10 +117,6 @@ category = "dev"
 optional = false
 python-versions = ">=3.6"
 
-[package.extras]
-colorama = ["colorama (>=0.4.3)"]
-d = ["aiohttp (>=3.3.2)", "aiohttp-cors"]
-
 [package.dependencies]
 appdirs = "*"
 click = ">=7.1.2"
@@ -134,9 +127,13 @@ toml = ">=0.10.1"
 typed-ast = ">=1.4.0"
 typing-extensions = ">=3.7.4"
 
+[package.extras]
+colorama = ["colorama (>=0.4.3)"]
+d = ["aiohttp (>=3.3.2)", "aiohttp-cors"]
+
 [[package]]
 name = "certifi"
-version = "2020.6.20"
+version = "2020.12.5"
 description = "Python package for providing Mozilla's CA Bundle."
 category = "main"
 optional = false
@@ -144,11 +141,11 @@ python-versions = "*"
 
 [[package]]
 name = "chardet"
-version = "3.0.4"
+version = "4.0.0"
 description = "Universal encoding detector for Python 2 and 3"
 category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
 [[package]]
 name = "click"
@@ -162,10 +159,9 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 name = "colorama"
 version = "0.4.4"
 description = "Cross-platform colored terminal text."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\" and sys_platform == \"win32\" or sys_platform == \"win32\""
 
 [[package]]
 name = "csvkit"
@@ -197,7 +193,6 @@ description = "Decorators for Humans"
 category = "dev"
 optional = false
 python-versions = ">=2.6, !=3.0.*, !=3.1.*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
 
 [[package]]
 name = "et-xmlfile"
@@ -238,12 +233,23 @@ python-versions = "*"
 
 [[package]]
 name = "ipython"
-version = "7.19.0"
+version = "7.20.0"
 description = "IPython: Productive Interactive Computing"
 category = "dev"
 optional = false
 python-versions = ">=3.7"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
+
+[package.dependencies]
+appnope = {version = "*", markers = "sys_platform == \"darwin\""}
+backcall = "*"
+colorama = {version = "*", markers = "sys_platform == \"win32\""}
+decorator = "*"
+jedi = ">=0.16"
+pexpect = {version = ">4.3", markers = "sys_platform != \"win32\""}
+pickleshare = "*"
+prompt-toolkit = ">=2.0.0,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.1.0"
+pygments = "*"
+traitlets = ">=4.2"
 
 [package.extras]
 all = ["Sphinx (>=1.3)", "ipykernel", "ipyparallel", "ipywidgets", "nbconvert", "nbformat", "nose (>=0.10.1)", "notebook", "numpy (>=1.14)", "pygments", "qtconsole", "requests", "testpath"]
@@ -256,19 +262,6 @@ parallel = ["ipyparallel"]
 qtconsole = ["qtconsole"]
 test = ["nose (>=0.10.1)", "requests", "testpath", "pygments", "nbformat", "ipykernel", "numpy (>=1.14)"]
 
-[package.dependencies]
-appnope = "*"
-backcall = "*"
-colorama = "*"
-decorator = "*"
-jedi = ">=0.10"
-pexpect = ">4.3"
-pickleshare = "*"
-prompt-toolkit = ">=2.0.0,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.1.0"
-pygments = "*"
-setuptools = ">=18.5"
-traitlets = ">=4.2"
-
 [[package]]
 name = "ipython-genutils"
 version = "0.2.0"
@@ -276,7 +269,6 @@ description = "Vestigial utilities from IPython"
 category = "dev"
 optional = false
 python-versions = "*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
 
 [[package]]
 name = "isodate"
@@ -291,7 +283,7 @@ six = "*"
 
 [[package]]
 name = "isort"
-version = "5.6.4"
+version = "5.7.0"
 description = "A Python utility / library to sort Python imports."
 category = "dev"
 optional = false
@@ -312,19 +304,18 @@ python-versions = "*"
 
 [[package]]
 name = "jedi"
-version = "0.17.2"
+version = "0.18.0"
 description = "An autocompletion tool for Python that can be used for text editors."
 category = "dev"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
-
-[package.extras]
-qa = ["flake8 (3.7.9)"]
-testing = ["Django (<3.1)", "colorama", "docopt", "pytest (>=3.9.0,<5.0.0)"]
+python-versions = ">=3.6"
 
 [package.dependencies]
-parso = ">=0.7.0,<0.8.0"
+parso = ">=0.8.0,<0.9.0"
+
+[package.extras]
+qa = ["flake8 (==3.8.3)", "mypy (==0.782)"]
+testing = ["Django (<3.1)", "colorama", "docopt", "pytest (<6.0.0)"]
 
 [[package]]
 name = "langid"
@@ -366,15 +357,15 @@ python-versions = "*"
 
 [[package]]
 name = "numpy"
-version = "1.19.4"
+version = "1.20.1"
 description = "NumPy is the fundamental package for array computing with Python."
 category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [[package]]
 name = "openpyxl"
-version = "3.0.5"
+version = "3.0.6"
 description = "A Python library to read/write Excel 2010 xlsx/xlsm files"
 category = "dev"
 optional = false
@@ -386,7 +377,7 @@ jdcal = "*"
 
 [[package]]
 name = "packaging"
-version = "20.4"
+version = "20.9"
 description = "Core utilities for Python packages"
 category = "dev"
 optional = false
@@ -394,23 +385,22 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [package.dependencies]
 pyparsing = ">=2.0.2"
-six = "*"
 
 [[package]]
 name = "pandas"
-version = "1.1.4"
+version = "1.2.2"
 description = "Powerful data structures for data analysis, time series, and statistics"
 category = "main"
 optional = false
-python-versions = ">=3.6.1"
-
-[package.extras]
-test = ["pytest (>=4.0.2)", "pytest-xdist", "hypothesis (>=3.58)"]
+python-versions = ">=3.7.1"
 
 [package.dependencies]
-numpy = ">=1.15.4"
+numpy = ">=1.16.5"
 python-dateutil = ">=2.7.3"
-pytz = ">=2017.2"
+pytz = ">=2017.3"
+
+[package.extras]
+test = ["pytest (>=5.0.1)", "pytest-xdist", "hypothesis (>=3.58)"]
 
 [[package]]
 name = "parsedatetime"
@@ -422,19 +412,19 @@ python-versions = "*"
 
 [[package]]
 name = "parso"
-version = "0.7.1"
+version = "0.8.1"
 description = "A Python Parser"
 category = "dev"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
+python-versions = ">=3.6"
 
 [package.extras]
-testing = ["docopt", "pytest (>=3.0.7)"]
+qa = ["flake8 (==3.8.3)", "mypy (==0.782)"]
+testing = ["docopt", "pytest (<6.0.0)"]
 
 [[package]]
 name = "pathspec"
-version = "0.8.0"
+version = "0.8.1"
 description = "Utility library for gitignore style pattern matching of file paths."
 category = "dev"
 optional = false
@@ -447,7 +437,6 @@ description = "Pexpect allows easy control of interactive console applications."
 category = "dev"
 optional = false
 python-versions = "*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\" and sys_platform != \"win32\""
 
 [package.dependencies]
 ptyprocess = ">=0.5"
@@ -459,7 +448,6 @@ description = "Tiny 'shelve'-like database with concurrency support"
 category = "dev"
 optional = false
 python-versions = "*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
 
 [[package]]
 name = "pluggy"
@@ -474,28 +462,26 @@ dev = ["pre-commit", "tox"]
 
 [[package]]
 name = "prompt-toolkit"
-version = "3.0.8"
+version = "3.0.16"
 description = "Library for building powerful interactive command lines in Python"
 category = "dev"
 optional = false
 python-versions = ">=3.6.1"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
 
 [package.dependencies]
 wcwidth = "*"
 
 [[package]]
 name = "ptyprocess"
-version = "0.6.0"
+version = "0.7.0"
 description = "Run a subprocess in a pseudo terminal"
 category = "dev"
 optional = false
 python-versions = "*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\" and sys_platform != \"win32\""
 
 [[package]]
 name = "py"
-version = "1.9.0"
+version = "1.10.0"
 description = "library with cross-python path, ini-parsing, io, code, log facilities"
 category = "dev"
 optional = false
@@ -527,12 +513,11 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [[package]]
 name = "pygments"
-version = "2.7.2"
+version = "2.8.0"
 description = "Pygments is a syntax highlighting package written in Python."
 category = "dev"
 optional = false
 python-versions = ">=3.5"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
 
 [[package]]
 name = "pyparsing"
@@ -544,26 +529,25 @@ python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 
 [[package]]
 name = "pytest"
-version = "6.1.2"
+version = "6.2.2"
 description = "pytest: simple powerful testing with Python"
 category = "dev"
 optional = false
-python-versions = ">=3.5"
-
-[package.extras]
-checkqa_mypy = ["mypy (0.780)"]
-testing = ["argcomplete", "hypothesis (>=3.56)", "mock", "nose", "requests", "xmlschema"]
+python-versions = ">=3.6"
 
 [package.dependencies]
-atomicwrites = ">=1.0"
-attrs = ">=17.4.0"
-colorama = "*"
+atomicwrites = {version = ">=1.0", markers = "sys_platform == \"win32\""}
+attrs = ">=19.2.0"
+colorama = {version = "*", markers = "sys_platform == \"win32\""}
 iniconfig = "*"
 packaging = "*"
-pluggy = ">=0.12,<1.0"
+pluggy = ">=0.12,<1.0.0a1"
 py = ">=1.8.2"
 toml = "*"
 
+[package.extras]
+testing = ["argcomplete", "hypothesis (>=3.56)", "mock", "nose", "requests", "xmlschema"]
+
 [[package]]
 name = "pytest-clarity"
 version = "0.3.0a0"
@@ -595,15 +579,15 @@ category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
-[package.extras]
-unidecode = ["Unidecode (>=1.1.1)"]
-
 [package.dependencies]
 text-unidecode = ">=1.3"
 
+[package.extras]
+unidecode = ["Unidecode (>=1.1.1)"]
+
 [[package]]
 name = "python-stdnum"
-version = "1.14"
+version = "1.16"
 description = "Python module to handle standardized numbers and codes"
 category = "main"
 optional = false
@@ -624,7 +608,7 @@ python-versions = "*"
 
 [[package]]
 name = "pytz"
-version = "2020.4"
+version = "2021.1"
 description = "World timezone definitions, modern and historical"
 category = "main"
 optional = false
@@ -632,7 +616,7 @@ python-versions = "*"
 
 [[package]]
 name = "regex"
-version = "2020.10.28"
+version = "2020.11.13"
 description = "Alternative regular expression module, to replace re."
 category = "dev"
 optional = false
@@ -640,21 +624,21 @@ python-versions = "*"
 
 [[package]]
 name = "requests"
-version = "2.24.0"
+version = "2.25.1"
 description = "Python HTTP for Humans."
 category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
-[package.extras]
-security = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)"]
-socks = ["PySocks (>=1.5.6,<1.5.7 || >1.5.7)", "win-inet-pton"]
-
 [package.dependencies]
 certifi = ">=2017.4.17"
-chardet = ">=3.0.2,<4"
+chardet = ">=3.0.2,<5"
 idna = ">=2.5,<3"
-urllib3 = ">=1.21.1,<1.25.0 || >1.25.0,<1.25.1 || >1.25.1,<1.26"
+urllib3 = ">=1.21.1,<1.27"
+
+[package.extras]
+security = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)"]
+socks = ["PySocks (>=1.5.6,!=1.5.7)", "win-inet-pton"]
 
 [[package]]
 name = "requests-cache"
@@ -677,7 +661,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
 
 [[package]]
 name = "sqlalchemy"
-version = "1.3.20"
+version = "1.3.23"
 description = "Database Abstraction Library"
 category = "dev"
 optional = false
@@ -690,10 +674,10 @@ mssql_pyodbc = ["pyodbc"]
 mysql = ["mysqlclient"]
 oracle = ["cx-oracle"]
 postgresql = ["psycopg2"]
-postgresql_pg8000 = ["pg8000"]
+postgresql_pg8000 = ["pg8000 (<1.16.6)"]
 postgresql_psycopg2binary = ["psycopg2-binary"]
 postgresql_psycopg2cffi = ["psycopg2cffi"]
-pymysql = ["pymysql"]
+pymysql = ["pymysql (<1)", "pymysql"]
 
 [[package]]
 name = "termcolor"
@@ -726,17 +710,16 @@ description = "Traitlets Python configuration system"
 category = "dev"
 optional = false
 python-versions = ">=3.7"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
-
-[package.extras]
-test = ["pytest"]
 
 [package.dependencies]
 ipython-genutils = "*"
 
+[package.extras]
+test = ["pytest"]
+
 [[package]]
 name = "typed-ast"
-version = "1.4.1"
+version = "1.4.2"
 description = "a fork of Python 2 and 3 ast modules with type comment support"
 category = "dev"
 optional = false
@@ -752,7 +735,7 @@ python-versions = "*"
 
 [[package]]
 name = "urllib3"
-version = "1.25.11"
+version = "1.26.3"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
 category = "main"
 optional = false
@@ -761,7 +744,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4"
 [package.extras]
 brotli = ["brotlipy (>=0.6.0)"]
 secure = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "certifi", "ipaddress"]
-socks = ["PySocks (>=1.5.6,<1.5.7 || >1.5.7,<2.0)"]
+socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
 
 [[package]]
 name = "wcwidth"
@@ -770,7 +753,6 @@ description = "Measures the displayed width of unicode strings in a terminal"
 category = "dev"
 optional = false
 python-versions = "*"
-marker = "python_version >= \"3.7\" and python_version < \"4.0\""
 
 [[package]]
 name = "xlrd"
@@ -781,9 +763,9 @@ optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [metadata]
-lock-version = "1.0"
+lock-version = "1.1"
 python-versions = "^3.8"
-content-hash = "63f2c6ef09652c4f8407660ff7b4690c8a07e5501eb8fc8c477f485de5888fcf"
+content-hash = "8c4ba410bbdc930d2d74f7864470a18827029a5697869833959708d7425460ae"
 
 [metadata.files]
 agate = [
@@ -804,20 +786,20 @@ appdirs = [
     {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"},
 ]
 appnope = [
-    {file = "appnope-0.1.0-py2.py3-none-any.whl", hash = "sha256:5b26757dc6f79a3b7dc9fab95359328d5747fcb2409d331ea66d0272b90ab2a0"},
-    {file = "appnope-0.1.0.tar.gz", hash = "sha256:8b995ffe925347a2138d7ac0fe77155e4311a0ea6d6da4f5128fe4b3cbe5ed71"},
+    {file = "appnope-0.1.2-py2.py3-none-any.whl", hash = "sha256:93aa393e9d6c54c5cd570ccadd8edad61ea0c4b9ea7a01409020c9aa019eb442"},
+    {file = "appnope-0.1.2.tar.gz", hash = "sha256:dd83cd4b5b460958838f6eb3000c660b1f9caf2a5b1de4264e941512f603258a"},
 ]
 atomicwrites = [
     {file = "atomicwrites-1.4.0-py2.py3-none-any.whl", hash = "sha256:6d1784dea7c0c8d4a5172b6c620f40b6e4cbfdf96d783691f2e1302a7b88e197"},
     {file = "atomicwrites-1.4.0.tar.gz", hash = "sha256:ae70396ad1a434f9c7046fd2dd196fc04b12f9e91ffb859164193be8b6168a7a"},
 ]
 attrs = [
-    {file = "attrs-20.2.0-py2.py3-none-any.whl", hash = "sha256:fce7fc47dfc976152e82d53ff92fa0407700c21acd20886a13777a0d20e655dc"},
-    {file = "attrs-20.2.0.tar.gz", hash = "sha256:26b54ddbbb9ee1d34d5d3668dd37d6cf74990ab23c828c2888dccdceee395594"},
+    {file = "attrs-20.3.0-py2.py3-none-any.whl", hash = "sha256:31b2eced602aa8423c2aea9c76a724617ed67cf9513173fd3a4f03e3a929c7e6"},
+    {file = "attrs-20.3.0.tar.gz", hash = "sha256:832aa3cde19744e49938b91fea06d69ecb9e649c93ba974535d08ad92164f700"},
 ]
 babel = [
-    {file = "Babel-2.8.0-py2.py3-none-any.whl", hash = "sha256:d670ea0b10f8b723672d3a6abeb87b565b244da220d76b4dba1b66269ec152d4"},
-    {file = "Babel-2.8.0.tar.gz", hash = "sha256:1aac2ae2d0d8ea368fa90906567f5c08463d98ade155c0c4bfedd6a0f7160e38"},
+    {file = "Babel-2.9.0-py2.py3-none-any.whl", hash = "sha256:9d35c22fcc79893c3ecc85ac4a56cde1ecf3f19c540bba0922308a6c06ca6fa5"},
+    {file = "Babel-2.9.0.tar.gz", hash = "sha256:da031ab54472314f210b0adcff1588ee5d1d1d0ba4dbd07b94dba82bde791e05"},
 ]
 backcall = [
     {file = "backcall-0.2.0-py2.py3-none-any.whl", hash = "sha256:fbbce6a29f263178a1f7915c1940bde0ec2b2a967566fe1c65c1dfb7422bd255"},
@@ -827,12 +809,12 @@ black = [
     {file = "black-20.8b1.tar.gz", hash = "sha256:1c02557aa099101b9d21496f8a914e9ed2222ef70336404eeeac8edba836fbea"},
 ]
 certifi = [
-    {file = "certifi-2020.6.20-py2.py3-none-any.whl", hash = "sha256:8fc0819f1f30ba15bdb34cceffb9ef04d99f420f68eb75d901e9560b8749fc41"},
-    {file = "certifi-2020.6.20.tar.gz", hash = "sha256:5930595817496dd21bb8dc35dad090f1c2cd0adfaf21204bf6732ca5d8ee34d3"},
+    {file = "certifi-2020.12.5-py2.py3-none-any.whl", hash = "sha256:719a74fb9e33b9bd44cc7f3a8d94bc35e4049deebe19ba7d8e108280cfd59830"},
+    {file = "certifi-2020.12.5.tar.gz", hash = "sha256:1a4995114262bffbc2413b159f2a1a480c969de6e6eb13ee966d470af86af59c"},
 ]
 chardet = [
-    {file = "chardet-3.0.4-py2.py3-none-any.whl", hash = "sha256:fc323ffcaeaed0e0a02bf4d117757b98aed530d9ed4531e3e15460124c106691"},
-    {file = "chardet-3.0.4.tar.gz", hash = "sha256:84ab92ed1c4d4f16916e05906b6b75a6c0fb5db821cc65e70cbd64a3e2a5eaae"},
+    {file = "chardet-4.0.0-py2.py3-none-any.whl", hash = "sha256:f864054d66fd9118f2e67044ac8981a54775ec5b67aed0441892edb553d21da5"},
+    {file = "chardet-4.0.0.tar.gz", hash = "sha256:0d6f53a15db4120f2b08c94f11e7d93d2c911ee118b6b30a04ec3ee8310179fa"},
 ]
 click = [
     {file = "click-7.1.2-py2.py3-none-any.whl", hash = "sha256:dacca89f4bfadd5de3d7489b7c8a566eee0d3676333fbb50030263894c38c0dc"},
@@ -869,8 +851,8 @@ iniconfig = [
     {file = "iniconfig-1.1.1.tar.gz", hash = "sha256:bc3af051d7d14b2ee5ef9969666def0cd1a000e121eaea580d4a313df4b37f32"},
 ]
 ipython = [
-    {file = "ipython-7.19.0-py3-none-any.whl", hash = "sha256:c987e8178ced651532b3b1ff9965925bfd445c279239697052561a9ab806d28f"},
-    {file = "ipython-7.19.0.tar.gz", hash = "sha256:cbb2ef3d5961d44e6a963b9817d4ea4e1fa2eb589c371a470fed14d8d40cbd6a"},
+    {file = "ipython-7.20.0-py3-none-any.whl", hash = "sha256:1918dea4bfdc5d1a830fcfce9a710d1d809cbed123e85eab0539259cb0f56640"},
+    {file = "ipython-7.20.0.tar.gz", hash = "sha256:1923af00820a8cf58e91d56b89efc59780a6e81363b94464a0f17c039dffff9e"},
 ]
 ipython-genutils = [
     {file = "ipython_genutils-0.2.0-py2.py3-none-any.whl", hash = "sha256:72dd37233799e619666c9f639a9da83c34013a73e8bbc79a7a6348d93c61fab8"},
@@ -881,16 +863,16 @@ isodate = [
     {file = "isodate-0.6.0.tar.gz", hash = "sha256:2e364a3d5759479cdb2d37cce6b9376ea504db2ff90252a2e5b7cc89cc9ff2d8"},
 ]
 isort = [
-    {file = "isort-5.6.4-py3-none-any.whl", hash = "sha256:dcab1d98b469a12a1a624ead220584391648790275560e1a43e54c5dceae65e7"},
-    {file = "isort-5.6.4.tar.gz", hash = "sha256:dcaeec1b5f0eca77faea2a35ab790b4f3680ff75590bfcb7145986905aab2f58"},
+    {file = "isort-5.7.0-py3-none-any.whl", hash = "sha256:fff4f0c04e1825522ce6949973e83110a6e907750cd92d128b0d14aaaadbffdc"},
+    {file = "isort-5.7.0.tar.gz", hash = "sha256:c729845434366216d320e936b8ad6f9d681aab72dc7cbc2d51bedc3582f3ad1e"},
 ]
 jdcal = [
     {file = "jdcal-1.4.1-py2.py3-none-any.whl", hash = "sha256:1abf1305fce18b4e8aa248cf8fe0c56ce2032392bc64bbd61b5dff2a19ec8bba"},
     {file = "jdcal-1.4.1.tar.gz", hash = "sha256:472872e096eb8df219c23f2689fc336668bdb43d194094b5cc1707e1640acfc8"},
 ]
 jedi = [
-    {file = "jedi-0.17.2-py2.py3-none-any.whl", hash = "sha256:98cc583fa0f2f8304968199b01b6b4b94f469a1f4a74c1560506ca2a211378b5"},
-    {file = "jedi-0.17.2.tar.gz", hash = "sha256:86ed7d9b750603e4ba582ea8edc678657fb4007894a12bcf6f4bb97892f31d20"},
+    {file = "jedi-0.18.0-py2.py3-none-any.whl", hash = "sha256:18456d83f65f400ab0c2d3319e48520420ef43b23a086fdc05dff34132f0fb93"},
+    {file = "jedi-0.18.0.tar.gz", hash = "sha256:92550a404bad8afed881a137ec9a461fed49eca661414be45059329614ed0707"},
 ]
 langid = [
     {file = "langid-1.1.6.tar.gz", hash = "sha256:044bcae1912dab85c33d8e98f2811b8f4ff1213e5e9a9e9510137b84da2cb293"},
@@ -908,86 +890,70 @@ mypy-extensions = [
     {file = "mypy_extensions-0.4.3.tar.gz", hash = "sha256:2d82818f5bb3e369420cb3c4060a7970edba416647068eb4c5343488a6c604a8"},
 ]
 numpy = [
-    {file = "numpy-1.19.4-cp36-cp36m-macosx_10_9_x86_64.whl", hash = "sha256:e9b30d4bd69498fc0c3fe9db5f62fffbb06b8eb9321f92cc970f2969be5e3949"},
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+    {file = "typed_ast-1.4.2-cp39-cp39-win_amd64.whl", hash = "sha256:7147e2a76c75f0f64c4319886e7639e490fee87c9d25cb1d4faef1d8cf83a440"},
+    {file = "typed_ast-1.4.2.tar.gz", hash = "sha256:9fc0b3cb5d1720e7141d103cf4819aea239f7d136acf9ee4a69b047b7986175a"},
 ]
 typing-extensions = [
     {file = "typing_extensions-3.7.4.3-py2-none-any.whl", hash = "sha256:dafc7639cde7f1b6e1acc0f457842a83e722ccca8eef5270af2d74792619a89f"},
@@ -1183,8 +1172,8 @@ typing-extensions = [
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 ]
 urllib3 = [
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-    {file = "urllib3-1.25.11.tar.gz", hash = "sha256:8d7eaa5a82a1cac232164990f04874c594c9453ec55eef02eab885aa02fc17a2"},
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+    {file = "urllib3-1.26.3.tar.gz", hash = "sha256:de3eedaad74a2683334e282005cd8d7f22f4d55fa690a2a1020a416cb0a47e73"},
 ]
 wcwidth = [
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pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "csv-metadata-quality"
-version = "0.4.2"
+version = "0.4.4"
 description="A simple, but opinionated CSV quality checking and fixing pipeline for CSVs in the DSpace ecosystem."
 authors = ["Alan Orth <alan.orth@gmail.com>"]
 license="GPL-3.0-only"
@@ -16,6 +16,7 @@ requests = "^2.23.0"
 requests-cache = "^0.5.2"
 pycountry = "^19.8.18"
 langid = "^1.1.6"
+colorama = "^0.4.4"
 
 [tool.poetry.dev-dependencies]
 pytest = "^6.1.1"

pytest.ini

@@ -1,5 +1,5 @@
 [pytest]
-addopts= -rsxX -s -v --strict --capture=sys
+addopts= -rsxX -s -v --strict-markers --capture=sys
 filterwarnings =
     error::UserWarning
     ignore:.*U.* is deprecated:DeprecationWarning

requirements-dev.txt

@@ -1,71 +1,71 @@
-agate==1.6.1
 agate-dbf==0.2.2
 agate-excel==0.2.3
 agate-sql==0.5.5
-appdirs==1.4.4
-appnope==0.1.0; python_version >= "3.7" and python_version < "4.0" and sys_platform == "darwin"
-atomicwrites==1.4.0; sys_platform == "win32"
-attrs==20.2.0
-babel==2.8.0
+agate==1.6.1
+appdirs==1.4.4; python_version >= "3.6"
+appnope==0.1.2; python_version >= "3.7" and python_version < "4.0" and sys_platform == "darwin"
+atomicwrites==1.4.0; python_version >= "3.6" and python_full_version < "3.0.0" and sys_platform == "win32" and (python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.4.0" and python_version >= "3.6") or sys_platform == "win32" and python_version >= "3.6" and python_full_version >= "3.4.0" and (python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.4.0" and python_version >= "3.6")
+attrs==20.3.0; python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.4.0" and python_version >= "3.6"
+babel==2.9.0; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.4.0"
 backcall==0.2.0; python_version >= "3.7" and python_version < "4.0"
-black==20.8b1
-certifi==2020.6.20
-chardet==3.0.4
-click==7.1.2
-colorama==0.4.4; python_version >= "3.7" and python_version < "4.0" and sys_platform == "win32" or sys_platform == "win32"
+black==20.8b1; python_version >= "3.6"
+certifi==2020.12.5; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.5.0"
+chardet==4.0.0; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.5.0"
+click==7.1.2; python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.5.0" and python_version >= "3.6"
+colorama==0.4.4; (python_version >= "2.7" and python_full_version < "3.0.0") or (python_full_version >= "3.5.0")
 csvkit==1.0.5
 dbfread==2.0.7
-decorator==4.4.2; python_version >= "3.7" and python_version < "4.0"
-et-xmlfile==1.0.1
-flake8==3.8.4
-idna==2.10
-iniconfig==1.1.1
-ipython==7.19.0; python_version >= "3.7" and python_version < "4.0"
+decorator==4.4.2; python_version >= "3.7" and python_full_version < "3.0.0" and python_version < "4.0" or python_version >= "3.7" and python_version < "4.0" and python_full_version >= "3.2.0"
+et-xmlfile==1.0.1; python_version >= "3.6"
+flake8==3.8.4; (python_version >= "2.7" and python_full_version < "3.0.0") or (python_full_version >= "3.4.0")
+idna==2.10; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.5.0"
+iniconfig==1.1.1; python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.4.0" and python_version >= "3.6"
 ipython-genutils==0.2.0; python_version >= "3.7" and python_version < "4.0"
+ipython==7.20.0; python_version >= "3.7" and python_version < "4.0"
 isodate==0.6.0
-isort==5.6.4
-jdcal==1.4.1
-jedi==0.17.2; python_version >= "3.7" and python_version < "4.0"
+isort==5.7.0; python_version >= "3.6" and python_version < "4.0"
+jdcal==1.4.1; python_version >= "3.6"
+jedi==0.18.0; python_version >= "3.7" and python_version < "4.0"
 langid==1.1.6
 leather==0.3.3
-mccabe==0.6.1
-mypy-extensions==0.4.3
-numpy==1.19.4
-openpyxl==3.0.5
-packaging==20.4
-pandas==1.1.4
+mccabe==0.6.1; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.4.0"
+mypy-extensions==0.4.3; python_version >= "3.6"
+numpy==1.20.1; python_version >= "3.7" and python_full_version >= "3.7.1"
+openpyxl==3.0.6; python_version >= "3.6"
+packaging==20.9; python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.4.0" and python_version >= "3.6"
+pandas==1.2.2; python_full_version >= "3.7.1"
 parsedatetime==2.6
-parso==0.7.1; python_version >= "3.7" and python_version < "4.0"
-pathspec==0.8.0
+parso==0.8.1; python_version >= "3.7" and python_version < "4.0"
+pathspec==0.8.1; python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.5.0" and python_version >= "3.6"
 pexpect==4.8.0; python_version >= "3.7" and python_version < "4.0" and sys_platform != "win32"
 pickleshare==0.7.5; python_version >= "3.7" and python_version < "4.0"
-pluggy==0.13.1
-prompt-toolkit==3.0.8; python_version >= "3.7" and python_version < "4.0"
-ptyprocess==0.6.0; python_version >= "3.7" and python_version < "4.0" and sys_platform != "win32"
-py==1.9.0
-pycodestyle==2.6.0
+pluggy==0.13.1; python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.4.0" and python_version >= "3.6"
+prompt-toolkit==3.0.16; python_version >= "3.7" and python_version < "4.0" and python_full_version >= "3.6.1"
+ptyprocess==0.7.0; python_version >= "3.7" and python_version < "4.0" and sys_platform != "win32"
+py==1.10.0; python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.4.0" and python_version >= "3.6"
+pycodestyle==2.6.0; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.4.0"
 pycountry==19.8.18
-pyflakes==2.2.0
-pygments==2.7.2; python_version >= "3.7" and python_version < "4.0"
-pyparsing==2.4.7
-pytest==6.1.2
-pytest-clarity==0.3.0a0
-python-dateutil==2.8.1
-python-slugify==4.0.1
-python-stdnum==1.14
+pyflakes==2.2.0; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.4.0"
+pygments==2.8.0; python_version >= "3.7" and python_version < "4.0"
+pyparsing==2.4.7; python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.4.0" and python_version >= "3.6"
+pytest-clarity==0.3.0a0; (python_version >= "2.7" and python_full_version < "3.0.0") or (python_full_version >= "3.4.0")
+pytest==6.2.2; python_version >= "3.6"
+python-dateutil==2.8.1; python_full_version >= "3.7.1"
+python-slugify==4.0.1; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.5.0"
+python-stdnum==1.16
 pytimeparse==1.1.8
-pytz==2020.4
-regex==2020.10.28
-requests==2.24.0
+pytz==2021.1; python_full_version >= "3.7.1"
+regex==2020.11.13; python_version >= "3.6"
 requests-cache==0.5.2
-six==1.15.0
-sqlalchemy==1.3.20
-termcolor==1.1.0
-text-unidecode==1.3
-toml==0.10.2
+requests==2.25.1; (python_version >= "2.7" and python_full_version < "3.0.0") or (python_full_version >= "3.5.0")
+six==1.15.0; python_full_version >= "3.7.1"
+sqlalchemy==1.3.23; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.4.0"
+termcolor==1.1.0; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.4.0"
+text-unidecode==1.3; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.5.0"
+toml==0.10.2; python_version >= "3.6" and python_full_version < "3.0.0" or python_full_version >= "3.4.0" and python_version >= "3.6"
 traitlets==5.0.5; python_version >= "3.7" and python_version < "4.0"
-typed-ast==1.4.1
-typing-extensions==3.7.4.3
-urllib3==1.25.11
-wcwidth==0.2.5; python_version >= "3.7" and python_version < "4.0"
-xlrd==1.2.0
+typed-ast==1.4.2; python_version >= "3.6"
+typing-extensions==3.7.4.3; python_version >= "3.6"
+urllib3==1.26.3; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.5.0" and python_version < "4"
+wcwidth==0.2.5; python_version >= "3.7" and python_version < "4.0" and python_full_version >= "3.6.1"
+xlrd==1.2.0; (python_version >= "2.7" and python_full_version < "3.0.0") or (python_full_version >= "3.4.0")

requirements.txt

@@ -1,15 +1,16 @@
-certifi==2020.6.20
-chardet==3.0.4
-idna==2.10
+certifi==2020.12.5; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.5.0"
+chardet==4.0.0; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.5.0"
+colorama==0.4.4; (python_version >= "2.7" and python_full_version < "3.0.0") or (python_full_version >= "3.5.0")
+idna==2.10; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.5.0"
 langid==1.1.6
-numpy==1.19.4
-pandas==1.1.4
+numpy==1.20.1; python_version >= "3.7" and python_full_version >= "3.7.1"
+pandas==1.2.2; python_full_version >= "3.7.1"
 pycountry==19.8.18
-python-dateutil==2.8.1
-python-stdnum==1.14
-pytz==2020.4
-requests==2.24.0
+python-dateutil==2.8.1; python_full_version >= "3.7.1"
+python-stdnum==1.16
+pytz==2021.1; python_full_version >= "3.7.1"
 requests-cache==0.5.2
-six==1.15.0
-urllib3==1.25.11
-xlrd==1.2.0
+requests==2.25.1; (python_version >= "2.7" and python_full_version < "3.0.0") or (python_full_version >= "3.5.0")
+six==1.15.0; python_full_version >= "3.7.1"
+urllib3==1.26.3; python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.5.0" and python_version < "4"
+xlrd==1.2.0; (python_version >= "2.7" and python_full_version < "3.0.0") or (python_full_version >= "3.4.0")

setup.py

@@ -14,7 +14,7 @@ install_requires = [
 
 setuptools.setup(
     name="csv-metadata-quality",
-    version="0.4.2",
+    version="0.4.3",
     author="Alan Orth",
     author_email="aorth@mjanja.ch",
     description="A simple, but opinionated CSV quality checking and fixing pipeline for CSVs in the DSpace ecosystem.",
@@ -23,7 +23,6 @@ setuptools.setup(
     long_description_content_type="text/markdown",
     url="https://github.com/alanorth/csv-metadata-quality",
     classifiers=[
-        "Programming Language :: Python :: 3.6",
         "Programming Language :: Python :: 3.7",
         "Programming Language :: Python :: 3.8",
         "Programming Language :: Python :: 3.9",

tests/test_check.py

@@ -1,4 +1,5 @@
 import pandas as pd
+from colorama import Fore
 
 import csv_metadata_quality.check as check
 import csv_metadata_quality.experimental as experimental
@@ -12,7 +13,7 @@ def test_check_invalid_issn(capsys):
     check.issn(value)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Invalid ISSN: {value}\n"
+    assert captured.out == f"{Fore.RED}Invalid ISSN: {Fore.RESET}{value}\n"
 
 
 def test_check_valid_issn():
@@ -33,7 +34,7 @@ def test_check_invalid_isbn(capsys):
     check.isbn(value)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Invalid ISBN: {value}\n"
+    assert captured.out == f"{Fore.RED}Invalid ISBN: {Fore.RESET}{value}\n"
 
 
 def test_check_valid_isbn():
@@ -56,7 +57,26 @@ def test_check_invalid_separators(capsys):
     check.separators(value, field_name)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Invalid multi-value separator ({field_name}): {value}\n"
+    assert (
+        captured.out
+        == f"{Fore.RED}Invalid multi-value separator ({field_name}): {Fore.RESET}{value}\n"
+    )
+
+
+def test_check_unnecessary_separators(capsys):
+    """Test checking unnecessary multi-value separators."""
+
+    field = "Alan||Orth||"
+
+    field_name = "dc.contributor.author"
+
+    check.separators(field, field_name)
+
+    captured = capsys.readouterr()
+    assert (
+        captured.out
+        == f"{Fore.RED}Unnecessary multi-value separator ({field_name}): {Fore.RESET}{field}\n"
+    )
 
 
 def test_check_valid_separators():
@@ -81,7 +101,7 @@ def test_check_missing_date(capsys):
     check.date(value, field_name)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Missing date ({field_name}).\n"
+    assert captured.out == f"{Fore.RED}Missing date ({field_name}).{Fore.RESET}\n"
 
 
 def test_check_multiple_dates(capsys):
@@ -94,7 +114,10 @@ def test_check_multiple_dates(capsys):
     check.date(value, field_name)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Multiple dates not allowed ({field_name}): {value}\n"
+    assert (
+        captured.out
+        == f"{Fore.RED}Multiple dates not allowed ({field_name}): {Fore.RESET}{value}\n"
+    )
 
 
 def test_check_invalid_date(capsys):
@@ -107,7 +130,9 @@ def test_check_invalid_date(capsys):
     check.date(value, field_name)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Invalid date ({field_name}): {value}\n"
+    assert (
+        captured.out == f"{Fore.RED}Invalid date ({field_name}): {Fore.RESET}{value}\n"
+    )
 
 
 def test_check_valid_date():
@@ -132,7 +157,10 @@ def test_check_suspicious_characters(capsys):
     check.suspicious_characters(value, field_name)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Suspicious character ({field_name}): ˆt\n"
+    assert (
+        captured.out
+        == f"{Fore.YELLOW}Suspicious character ({field_name}): {Fore.RESET}ˆt\n"
+    )
 
 
 def test_check_valid_iso639_1_language():
@@ -163,7 +191,9 @@ def test_check_invalid_iso639_1_language(capsys):
     check.language(value)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Invalid ISO 639-1 language: {value}\n"
+    assert (
+        captured.out == f"{Fore.RED}Invalid ISO 639-1 language: {Fore.RESET}{value}\n"
+    )
 
 
 def test_check_invalid_iso639_3_language(capsys):
@@ -174,7 +204,9 @@ def test_check_invalid_iso639_3_language(capsys):
     check.language(value)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Invalid ISO 639-3 language: {value}\n"
+    assert (
+        captured.out == f"{Fore.RED}Invalid ISO 639-3 language: {Fore.RESET}{value}\n"
+    )
 
 
 def test_check_invalid_language(capsys):
@@ -185,7 +217,7 @@ def test_check_invalid_language(capsys):
     check.language(value)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Invalid language: {value}\n"
+    assert captured.out == f"{Fore.RED}Invalid language: {Fore.RESET}{value}\n"
 
 
 def test_check_invalid_agrovoc(capsys):
@@ -197,7 +229,10 @@ def test_check_invalid_agrovoc(capsys):
     check.agrovoc(value, field_name)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Invalid AGROVOC ({field_name}): {value}\n"
+    assert (
+        captured.out
+        == f"{Fore.RED}Invalid AGROVOC ({field_name}): {Fore.RESET}{value}\n"
+    )
 
 
 def test_check_valid_agrovoc():
@@ -219,7 +254,10 @@ def test_check_uncommon_filename_extension(capsys):
     check.filename_extension(value)
 
     captured = capsys.readouterr()
-    assert captured.out == f"Filename with uncommon extension: {value}\n"
+    assert (
+        captured.out
+        == f"{Fore.YELLOW}Filename with uncommon extension: {Fore.RESET}{value}\n"
+    )
 
 
 def test_check_common_filename_extension():
@@ -247,7 +285,7 @@ def test_check_incorrect_iso_639_1_language(capsys):
     captured = capsys.readouterr()
     assert (
         captured.out
-        == f"Possibly incorrect language {language} (detected en): {title}\n"
+        == f"{Fore.YELLOW}Possibly incorrect language {language} (detected en): {Fore.RESET}{title}\n"
     )
 
 
@@ -266,7 +304,7 @@ def test_check_incorrect_iso_639_3_language(capsys):
     captured = capsys.readouterr()
     assert (
         captured.out
-        == f"Possibly incorrect language {language} (detected eng): {title}\n"
+        == f"{Fore.YELLOW}Possibly incorrect language {language} (detected eng): {Fore.RESET}{title}\n"
     )
 
 

tests/test_fix.py

@@ -41,6 +41,16 @@ def test_fix_invalid_separators():
     assert fix.separators(value, field_name) == "Alan||Orth"
 
 
+def test_fix_unnecessary_separators():
+    """Test fixing unnecessary multi-value separators."""
+
+    field = "Alan||Orth||"
+
+    field_name = "dc.contributor.author"
+
+    assert fix.separators(field, field_name) == "Alan||Orth"
+
+
 def test_fix_unnecessary_unicode():
     """Test fixing unnecessary Unicode."""