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Move ILRI collection 10568/12503 from 10568/27869 to 10568/27629 using the move_collections.sh script I wrote last year.
I realized it is only necessary to clear the Cocoon cache after moving collections—rather than reindexing—as no metadata has changed, and therefore no search or browse indexes need to be updated.
Update GitHub wiki for documentation of maintenance tasks.
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<meta name="twitter:description" content="2016-01-13

Move ILRI collection 10568/12503 from 10568/27869 to 10568/27629 using the move_collections.sh script I wrote last year.
I realized it is only necessary to clear the Cocoon cache after moving collections—rather than reindexing—as no metadata has changed, and therefore no search or browse indexes need to be updated.
Update GitHub wiki for documentation of maintenance tasks.
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        <h1 class="blog-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
        <p class="lead blog-description" dir="auto">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
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    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-01/">January, 2016</a></h2>
    <p class="blog-post-meta"><time datetime="2016-01-13T13:18:00&#43;03:00">Wed Jan 13, 2016</time> by Alan Orth in 

<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>

</p>
  </header>
  <h2 id="2016-01-13">2016-01-13</h2>
<ul>
<li>Move ILRI collection <code>10568/12503</code> from <code>10568/27869</code> to <code>10568/27629</code> using the <a href="https://gist.github.com/alanorth/392c4660e8b022d99dfa">move_collections.sh</a> script I wrote last year.</li>
<li>I realized it is only necessary to clear the Cocoon cache after moving collections—rather than reindexing—as no metadata has changed, and therefore no search or browse indexes need to be updated.</li>
<li>Update GitHub wiki for documentation of <a href="https://github.com/ilri/DSpace/wiki/Maintenance-Tasks">maintenance tasks</a>.</li>
</ul>
<h2 id="2016-01-14">2016-01-14</h2>
<ul>
<li>Update CCAFS project identifiers in input-forms.xml</li>
<li>Run system updates and restart the server</li>
</ul>
<h2 id="2016-01-18">2016-01-18</h2>
<ul>
<li>Change &ldquo;Extension material&rdquo; to &ldquo;Extension Material&rdquo; in input-forms.xml (a mistake that fell through the cracks when we fixed the others in DSpace 4 era)</li>
</ul>
<h2 id="2016-01-19">2016-01-19</h2>
<ul>
<li>Work on tweaks and updates for the social sharing icons on item pages: add Delicious and Mendeley (from Academicons), make links open in new windows, and set the icon color to the theme's primary color (<a href="https://github.com/ilri/DSpace/issues/157">#157</a>)</li>
<li>Tweak date-based facets to show more values in drill-down ranges (<a href="https://github.com/ilri/DSpace/issues/162">#162</a>)</li>
<li>Need to remember to clear the Cocoon cache after deployment or else you don't see the new ranges immediately</li>
<li>Set up recipe on IFTTT to tweet new items from the CGSpace Atom feed to my twitter account</li>
<li>Altmetrics&rsquo; support for Handles is kinda weak, so they can't associate our items with DOIs until they are tweeted or blogged, etc first.</li>
</ul>
<h2 id="2016-01-21">2016-01-21</h2>
<ul>
<li>Still waiting for my IFTTT recipe to fire, two days later</li>
<li>It looks like the Atom feed on CGSpace hasn't changed in two days, but there have definitely been new items</li>
<li>The RSS feed is nearly as old, but has different old items there</li>
<li>On a hunch I cleared the Cocoon cache and now the feeds are fresh</li>
<li>Looks like there is configuration option related to this, <code>webui.feed.cache.age</code>, which defaults to 48 hours, though I'm not sure what relation it has to the Cocoon cache</li>
<li>In any case, we should change this cache to be something more like 6 hours, as we publish new items several times per day.</li>
<li>Work around a CSS issue with long URLs in the item view (<a href="https://github.com/ilri/DSpace/issues/172">#172</a>)</li>
</ul>
<h2 id="2016-01-25">2016-01-25</h2>
<ul>
<li>Re-deploy CGSpace and DSpace Test with latest <code>5_x-prod</code> branch</li>
<li>This included the social icon fixes/updates, date-based facet tweaks, reducing the feed cache age, and fixing a layout issue in XMLUI item view when an item had long URLs</li>
</ul>
<h2 id="2016-01-26">2016-01-26</h2>
<ul>
<li>Run nginx updates on CGSpace and DSpace Test (<a href="http://mailman.nginx.org/pipermail/nginx/2016-January/049700.html">1.8.1 and 1.9.10, respectively</a>)</li>
<li>Run updates on DSpace Test and reboot for new Linode kernel <code>Linux 4.4.0-x86_64-linode63</code> (first update in months)</li>
</ul>
<h2 id="2016-01-28">2016-01-28</h2>
<ul>
<li>
<p>Start looking at importing some Bioversity data that had been prepared earlier this week</p>
</li>
<li>
<p>While checking the data I noticed something strange, there are 79 items but only 8 unique PDFs:</p>
<p>$ ls SimpleArchiveForBio/ | wc -l
79
$ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} ; | sort -u | wc -l
8</p>
</li>
</ul>
<h2 id="2016-01-29">2016-01-29</h2>
<ul>
<li>Add five missing center-specific subjects to XMLUI item view (<a href="https://github.com/ilri/DSpace/issues/174">#174</a>)</li>
<li>This <a href="https://cgspace.cgiar.org/handle/10568/67062">CCAFS item</a> Before:</li>
</ul>
<p><img src="/cgspace-notes/2016/01/xmlui-subjects-before.png" alt="XMLUI subjects before"></p>
<ul>
<li>After:</li>
</ul>
<p><img src="/cgspace-notes/2016/01/xmlui-subjects-after.png" alt="XMLUI subjects after"></p>

  
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>

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Update theme submodule and regenerate public 2019-10-11 10:19:42 +02:00			`<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-01/">January, 2016</a></h2>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<p class="blog-post-meta"><time datetime="2016-01-13T13:18:00+03:00">Wed Jan 13, 2016</time> by Alan Orth in`

			`<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>`

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Add notes for 2019-12-17 2019-12-17 13:49:24 +01:00			`<h2 id="2016-01-13">2016-01-13</h2>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<ul>`
			`<li>Move ILRI collection <code>10568/12503</code> from <code>10568/27869</code> to <code>10568/27629</code> using the <a href="https://gist.github.com/alanorth/392c4660e8b022d99dfa">move_collections.sh</a> script I wrote last year.</li>`
			`<li>I realized it is only necessary to clear the Cocoon cache after moving collections—rather than reindexing—as no metadata has changed, and therefore no search or browse indexes need to be updated.</li>`
			`<li>Update GitHub wiki for documentation of <a href="https://github.com/ilri/DSpace/wiki/Maintenance-Tasks">maintenance tasks</a>.</li>`
			`</ul>`
Add notes for 2019-12-17 2019-12-17 13:49:24 +01:00			`<h2 id="2016-01-14">2016-01-14</h2>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<ul>`
			`<li>Update CCAFS project identifiers in input-forms.xml</li>`
			`<li>Run system updates and restart the server</li>`
			`</ul>`
Add notes for 2019-12-17 2019-12-17 13:49:24 +01:00			`<h2 id="2016-01-18">2016-01-18</h2>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<ul>`
			`<li>Change “Extension material” to “Extension Material” in input-forms.xml (a mistake that fell through the cracks when we fixed the others in DSpace 4 era)</li>`
			`</ul>`
Add notes for 2019-12-17 2019-12-17 13:49:24 +01:00			`<h2 id="2016-01-19">2016-01-19</h2>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<ul>`
Add notes for 2019-11-28 2019-11-28 16:30:45 +01:00			`<li>Work on tweaks and updates for the social sharing icons on item pages: add Delicious and Mendeley (from Academicons), make links open in new windows, and set the icon color to the theme's primary color (<a href="https://github.com/ilri/DSpace/issues/157">#157</a>)</li>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<li>Tweak date-based facets to show more values in drill-down ranges (<a href="https://github.com/ilri/DSpace/issues/162">#162</a>)</li>`
Add notes for 2019-11-28 2019-11-28 16:30:45 +01:00			`<li>Need to remember to clear the Cocoon cache after deployment or else you don't see the new ranges immediately</li>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<li>Set up recipe on IFTTT to tweet new items from the CGSpace Atom feed to my twitter account</li>`
Add notes for 2019-11-28 2019-11-28 16:30:45 +01:00			`<li>Altmetrics’ support for Handles is kinda weak, so they can't associate our items with DOIs until they are tweeted or blogged, etc first.</li>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`</ul>`
Add notes for 2019-12-17 2019-12-17 13:49:24 +01:00			`<h2 id="2016-01-21">2016-01-21</h2>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<ul>`
			`<li>Still waiting for my IFTTT recipe to fire, two days later</li>`
Add notes for 2019-11-28 2019-11-28 16:30:45 +01:00			`<li>It looks like the Atom feed on CGSpace hasn't changed in two days, but there have definitely been new items</li>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<li>The RSS feed is nearly as old, but has different old items there</li>`
			`<li>On a hunch I cleared the Cocoon cache and now the feeds are fresh</li>`
Add notes for 2019-11-28 2019-11-28 16:30:45 +01:00			`<li>Looks like there is configuration option related to this, <code>webui.feed.cache.age</code>, which defaults to 48 hours, though I'm not sure what relation it has to the Cocoon cache</li>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<li>In any case, we should change this cache to be something more like 6 hours, as we publish new items several times per day.</li>`
			`<li>Work around a CSS issue with long URLs in the item view (<a href="https://github.com/ilri/DSpace/issues/172">#172</a>)</li>`
			`</ul>`
Add notes for 2019-12-17 2019-12-17 13:49:24 +01:00			`<h2 id="2016-01-25">2016-01-25</h2>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<ul>`
			`<li>Re-deploy CGSpace and DSpace Test with latest <code>5_x-prod</code> branch</li>`
			`<li>This included the social icon fixes/updates, date-based facet tweaks, reducing the feed cache age, and fixing a layout issue in XMLUI item view when an item had long URLs</li>`
			`</ul>`
Add notes for 2019-12-17 2019-12-17 13:49:24 +01:00			`<h2 id="2016-01-26">2016-01-26</h2>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<ul>`
			`<li>Run nginx updates on CGSpace and DSpace Test (<a href="http://mailman.nginx.org/pipermail/nginx/2016-January/049700.html">1.8.1 and 1.9.10, respectively</a>)</li>`
			`<li>Run updates on DSpace Test and reboot for new Linode kernel <code>Linux 4.4.0-x86_64-linode63</code> (first update in months)</li>`
			`</ul>`
Add notes for 2019-12-17 2019-12-17 13:49:24 +01:00			`<h2 id="2016-01-28">2016-01-28</h2>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<ul>`
Add notes for 2019-11-28 2019-11-28 16:30:45 +01:00			`<li>`
			`<p>Start looking at importing some Bioversity data that had been prepared earlier this week</p>`
			`</li>`
			`<li>`
			`<p>While checking the data I noticed something strange, there are 79 items but only 8 unique PDFs:</p>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<p>$ ls SimpleArchiveForBio/ \| wc -l`
			`79`
Add notes for 2019-11-28 2019-11-28 16:30:45 +01:00			`$ find SimpleArchiveForBio/ -iname “*.pdf” -exec basename {} ; \| sort -u \| wc -l`
			`8</p>`
			`</li>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`</ul>`
Add notes for 2019-12-17 2019-12-17 13:49:24 +01:00			`<h2 id="2016-01-29">2016-01-29</h2>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<ul>`
			`<li>Add five missing center-specific subjects to XMLUI item view (<a href="https://github.com/ilri/DSpace/issues/174">#174</a>)</li>`
			`<li>This <a href="https://cgspace.cgiar.org/handle/10568/67062">CCAFS item</a> Before:</li>`
			`</ul>`
Add notes for 2019-11-28 2019-11-28 16:30:45 +01:00			`<p><img src="/cgspace-notes/2016/01/xmlui-subjects-before.png" alt="XMLUI subjects before"></p>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`<ul>`
			`<li>After:</li>`
			`</ul>`
Add notes for 2019-11-28 2019-11-28 16:30:45 +01:00			`<p><img src="/cgspace-notes/2016/01/xmlui-subjects-after.png" alt="XMLUI subjects after"></p>`
Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00




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Add notes for 2019-12-01 2019-12-01 10:29:49 +01:00			`<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>`

Add notes for 2019-11-04 2019-11-04 15:41:19 +01:00			`<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>`

Regenerate public 2019-10-28 12:43:25 +01:00			`<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>`

Add notes for 2019-10-01 2019-10-01 16:31:40 +02:00			`<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>`

Add notes for 2019-09-01 2019-09-01 09:41:30 +02:00			`<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>`

Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00			`</ol>`
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			`<h4>Links</h4>`
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			`<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>`

			`<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>`

			`<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>`

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Try to use 'docs' dir for GitHub pages 2018-02-11 17:28:23 +01:00
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