Add notes for 2019-12-01

2024-11-22 06:35:03 +01:00 · 2019-12-01 11:29:49 +02:00 · 2019-12-01 11:29:49 +02:00 · 3188072553
commit 3188072553
parent 6bae7849e6
91 changed files with 1440 additions and 906 deletions
--- a/content/posts/2019-12.md
+++ b/content/posts/2019-12.md
@ -0,0 +1,58 @@
+---
+title: "December, 2019"
+date: 2019-12-01T11:22:30+02:00
+author: "Alan Orth"
+categories: ["Notes"]
+---
+
+## 2019-12-01
+
+- Upgrade CGSpace (linode18) to Ubuntu 18.04:
+  - Check any packages that have residual configs and purge them:
+  - <code># dpkg -l | grep -E '^rc' | awk '{print $2}' | xargs dpkg -P</code>
+  - Make sure all packages are up to date and the package manager is up to date, then reboot:
+
+```
+# apt update && apt full-upgrade
+# apt-get autoremove && apt-get autoclean
+# dpkg -C
+# reboot
+```
+
+<!--more-->
+
+  - Take some backups:
+
+```
+# dpkg -l > 2019-12-01-linode18-dpkg.txt
+# tar czf 2019-12-01-linode18-etc.tar.gz /etc
+```
+  - Then check all third-party repositories in /etc/apt to see if everything using "xenial" has packages available for "bionic" and then update the sources:
+  - <code># sed -i 's/xenial/bionic/' /etc/apt/sources.list.d/*.list</code>
+  - Pause the Uptime Robot monitoring for CGSpace
+  - Make sure the update manager is installed and do the upgrade:
+
+```
+# apt install update-manager-core
+# do-release-upgrade
+```
+
+  - After the upgrade finishes, remove Java 11, force the installation of bionic nginx, and reboot the server:
+
+```
+# apt purge openjdk-11-jre-headless
+# apt install 'nginx=1.16.1-1~bionic'
+# reboot
+```
+
+  - After the server comes back up, remove Python virtualenvs that were created with Python 3.5 and re-run certbot to make sure it's working:
+
+```
+# rm -rf /opt/eff.org/certbot/venv/bin/letsencrypt
+# rm -rf /opt/ilri/dspace-statistics-api/venv
+# /opt/certbot-auto
+```
+
+  - Clear Ansible's fact cache and re-run the playbooks to update the system's firewalls, SSH config, etc
+
+<!-- vim: set sw=2 ts=2: -->
--- a/docs/2015-11/index.html
+++ b/docs/2015-11/index.html
@ -234,6 +234,8 @@ db.statementpool = true
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -242,8 +244,6 @@ db.statementpool = true

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2015-12/index.html
+++ b/docs/2015-12/index.html
@ -256,6 +256,8 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -264,8 +266,6 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-01/index.html
+++ b/docs/2016-01/index.html
@ -192,6 +192,8 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} ; | sor
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -200,8 +202,6 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} ; | sor

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-02/index.html
+++ b/docs/2016-02/index.html
@ -370,6 +370,8 @@ Bitstream: tést señora alimentación.pdf
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -378,8 +380,6 @@ Bitstream: tést señora alimentación.pdf

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-03/index.html
+++ b/docs/2016-03/index.html
@ -308,6 +308,8 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -316,8 +318,6 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-04/index.html
+++ b/docs/2016-04/index.html
@ -487,6 +487,8 @@ dspace.log.2016-04-27:7271
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -495,8 +497,6 @@ dspace.log.2016-04-27:7271

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-05/index.html
+++ b/docs/2016-05/index.html
@ -363,6 +363,8 @@ sys     0m20.540s
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -371,8 +373,6 @@ sys     0m20.540s

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-06/index.html
+++ b/docs/2016-06/index.html
@ -401,6 +401,8 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -409,8 +411,6 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-07/index.html
+++ b/docs/2016-07/index.html
@ -317,6 +317,8 @@ discovery.index.authority.ignore-variants=true
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -325,8 +327,6 @@ discovery.index.authority.ignore-variants=true

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-08/index.html
+++ b/docs/2016-08/index.html
@ -381,6 +381,8 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -389,8 +391,6 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-09/index.html
+++ b/docs/2016-09/index.html
@ -598,6 +598,8 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -606,8 +608,6 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-10/index.html
+++ b/docs/2016-10/index.html
@ -364,6 +364,8 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -372,8 +374,6 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-11/index.html
+++ b/docs/2016-11/index.html
@ -540,6 +540,8 @@ org.dspace.discovery.SearchServiceException: Error executing query
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -548,8 +550,6 @@ org.dspace.discovery.SearchServiceException: Error executing query

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2016-12/index.html
+++ b/docs/2016-12/index.html
@ -776,6 +776,8 @@ $ exit
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -784,8 +786,6 @@ $ exit

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-01/index.html
+++ b/docs/2017-01/index.html
@ -361,6 +361,8 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -369,8 +371,6 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-02/index.html
+++ b/docs/2017-02/index.html
@ -416,6 +416,8 @@ COPY 1968
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -424,8 +426,6 @@ COPY 1968

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-03/index.html
+++ b/docs/2017-03/index.html
@ -347,6 +347,8 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -355,8 +357,6 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-04/index.html
+++ b/docs/2017-04/index.html
@ -577,6 +577,8 @@ $ gem install compass -v 1.0.3
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -585,8 +587,6 @@ $ gem install compass -v 1.0.3

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-05/index.html
+++ b/docs/2017-05/index.html
@ -383,6 +383,8 @@ UPDATE 187
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -391,8 +393,6 @@ UPDATE 187

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-06/index.html
+++ b/docs/2017-06/index.html
@ -262,6 +262,8 @@ $ JAVA_OPTS=&quot;-Xmx1024m -Dfile.encoding=UTF-8&quot; [dspace]/bin/dspace impo
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -270,8 +272,6 @@ $ JAVA_OPTS=&quot;-Xmx1024m -Dfile.encoding=UTF-8&quot; [dspace]/bin/dspace impo

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-07/index.html
+++ b/docs/2017-07/index.html
@ -267,6 +267,8 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -275,8 +277,6 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-08/index.html
+++ b/docs/2017-08/index.html
@ -509,6 +509,8 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -517,8 +519,6 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-09/index.html
+++ b/docs/2017-09/index.html
@ -651,6 +651,8 @@ Cert Status: good
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -659,8 +661,6 @@ Cert Status: good

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-10/index.html
+++ b/docs/2017-10/index.html
@ -435,6 +435,8 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -443,8 +445,6 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-11/index.html
+++ b/docs/2017-11/index.html
@ -936,6 +936,8 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -944,8 +946,6 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2017-12/index.html
+++ b/docs/2017-12/index.html
@ -775,6 +775,8 @@ DELETE 20
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -783,8 +785,6 @@ DELETE 20

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-01/index.html
+++ b/docs/2018-01/index.html
@ -1444,6 +1444,8 @@ Catalina:type=Manager,context=/,host=localhost  activeSessions  8
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -1452,8 +1454,6 @@ Catalina:type=Manager,context=/,host=localhost  activeSessions  8

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-02/index.html
+++ b/docs/2018-02/index.html
@ -1031,6 +1031,8 @@ UPDATE 3
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -1039,8 +1041,6 @@ UPDATE 3

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-03/index.html
+++ b/docs/2018-03/index.html
@ -577,6 +577,8 @@ Fixed 5 occurences of: GENEBANKS
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -585,8 +587,6 @@ Fixed 5 occurences of: GENEBANKS

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-04/index.html
+++ b/docs/2018-04/index.html
@ -586,6 +586,8 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -594,8 +596,6 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-05/index.html
+++ b/docs/2018-05/index.html
@ -515,6 +515,8 @@ $ psql -h localhost -U postgres dspacetest
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -523,8 +525,6 @@ $ psql -h localhost -U postgres dspacetest

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-06/index.html
+++ b/docs/2018-06/index.html
@ -506,6 +506,8 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -514,8 +516,6 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-07/index.html
+++ b/docs/2018-07/index.html
@ -561,6 +561,8 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -569,8 +571,6 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-08/index.html
+++ b/docs/2018-08/index.html
@ -434,6 +434,8 @@ $ dspace database migrate ignored
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -442,8 +444,6 @@ $ dspace database migrate ignored

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-09/index.html
+++ b/docs/2018-09/index.html
@ -740,6 +740,8 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -748,8 +750,6 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-10/index.html
+++ b/docs/2018-10/index.html
@ -649,6 +649,8 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -657,8 +659,6 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-11/index.html
+++ b/docs/2018-11/index.html
@ -545,6 +545,8 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -553,8 +555,6 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2018-12/index.html
+++ b/docs/2018-12/index.html
@ -586,6 +586,8 @@ UPDATE 1
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -594,8 +596,6 @@ UPDATE 1

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-01/index.html
+++ b/docs/2019-01/index.html
@ -1256,6 +1256,8 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -1264,8 +1266,6 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-02/index.html
+++ b/docs/2019-02/index.html
@ -1336,6 +1336,8 @@ Please see the DSpace documentation for assistance.
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -1344,8 +1346,6 @@ Please see the DSpace documentation for assistance.

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-03/index.html
+++ b/docs/2019-03/index.html
@ -1200,6 +1200,8 @@ sys     0m2.551s
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -1208,8 +1210,6 @@ sys     0m2.551s

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-04/index.html
+++ b/docs/2019-04/index.html
@ -1291,6 +1291,8 @@ UPDATE 14
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -1299,8 +1301,6 @@ UPDATE 14

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-05/index.html
+++ b/docs/2019-05/index.html
@ -623,6 +623,8 @@ COPY 64871
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -631,8 +633,6 @@ COPY 64871

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-06/index.html
+++ b/docs/2019-06/index.html
@ -309,6 +309,8 @@ UPDATE 2
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -317,8 +319,6 @@ UPDATE 2

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-07/index.html
+++ b/docs/2019-07/index.html
@ -546,6 +546,8 @@ issn.validate('1020-3362')
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -554,8 +556,6 @@ issn.validate('1020-3362')

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-08/index.html
+++ b/docs/2019-08/index.html
@ -565,6 +565,8 @@ sys     2m27.496s
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -573,8 +575,6 @@ sys     2m27.496s

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-09/index.html
+++ b/docs/2019-09/index.html
@ -573,6 +573,8 @@ $ csv-metadata-quality -i /tmp/clarisa-institutions.csv -o /tmp/clarisa-institut
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -581,8 +583,6 @@ $ csv-metadata-quality -i /tmp/clarisa-institutions.csv -o /tmp/clarisa-institut

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-10/index.html
+++ b/docs/2019-10/index.html
@ -377,6 +377,8 @@ $ dspace import -a -c 10568/104057 -e fuu@cgiar.org -m 2019-10-15-Bioversity.map
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -385,8 +387,6 @@ $ dspace import -a -c 10568/104057 -e fuu@cgiar.org -m 2019-10-15-Bioversity.map

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-11/index.html
+++ b/docs/2019-11/index.html
@ -30,7 +30,7 @@ Let&#39;s see how many of the REST API requests were for bitstreams (because the
 <meta property="og:type" content="article" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-11/" />
 <meta property="article:published_time" content="2019-11-04T12:20:30+02:00" />
-<meta property="article:modified_time" content="2019-11-27T14:56:00+02:00" />
+<meta property="article:modified_time" content="2019-11-28T17:30:45+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="November, 2019"/>
@ -67,7 +67,7 @@ Let&#39;s see how many of the REST API requests were for bitstreams (because the
  "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-11\/",
  "wordCount": "3457",
  "datePublished": "2019-11-04T12:20:30+02:00",
-  "dateModified": "2019-11-27T14:56:00+02:00",
+  "dateModified": "2019-11-28T17:30:45+02:00",
  "author": {
    "@type": "Person",
    "name": "Alan Orth"
@ -684,6 +684,8 @@ $ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-i
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -692,8 +694,6 @@ $ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-i

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/2019-12/index.html
+++ b/docs/2019-12/index.html
@ -0,0 +1,241 @@
+<!DOCTYPE html>
+<html lang="en" >
+
+  <head>
+    <meta charset="utf-8">
+<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
+
+<meta property="og:title" content="December, 2019" />
+<meta property="og:description" content="2019-12-01
+
+Upgrade CGSpace (linode18) to Ubuntu 18.04:
+
+Check any packages that have residual configs and purge them:
+# dpkg -l | grep -E &lsquo;^rc&rsquo; | awk &lsquo;{print $2}&rsquo; | xargs dpkg -P
+Make sure all packages are up to date and the package manager is up to date, then reboot:
+
+
+
+# apt update &amp;&amp; apt full-upgrade
+# apt-get autoremove &amp;&amp; apt-get autoclean
+# dpkg -C
+# reboot
+" />
+<meta property="og:type" content="article" />
+<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-12/" />
+<meta property="article:published_time" content="2019-12-01T11:22:30+02:00" />
+<meta property="article:modified_time" content="2019-12-01T11:22:30+02:00" />
+
+<meta name="twitter:card" content="summary"/>
+<meta name="twitter:title" content="December, 2019"/>
+<meta name="twitter:description" content="2019-12-01
+
+Upgrade CGSpace (linode18) to Ubuntu 18.04:
+
+Check any packages that have residual configs and purge them:
+# dpkg -l | grep -E &lsquo;^rc&rsquo; | awk &lsquo;{print $2}&rsquo; | xargs dpkg -P
+Make sure all packages are up to date and the package manager is up to date, then reboot:
+
+
+
+# apt update &amp;&amp; apt full-upgrade
+# apt-get autoremove &amp;&amp; apt-get autoclean
+# dpkg -C
+# reboot
+"/>
+<meta name="generator" content="Hugo 0.60.0" />
+
+
+    
+<script type="application/ld+json">
+{
+  "@context": "http://schema.org",
+  "@type": "BlogPosting",
+  "headline": "December, 2019",
+  "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-12\/",
+  "wordCount": "208",
+  "datePublished": "2019-12-01T11:22:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
+  "author": {
+    "@type": "Person",
+    "name": "Alan Orth"
+  },
+  "keywords": "Notes"
+}
+</script>
+
+
+
+    <link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2019-12/">
+
+    <title>December, 2019 | CGSpace Notes</title>
+
+    
+    <!-- combined, minified CSS -->
+    <link href="https://alanorth.github.io/cgspace-notes/css/style.css" rel="stylesheet" integrity="sha384-G5B34w7DFTumWTswxYzTX7NWfbvQEg1HbFFEg6ItN03uTAAoS2qkPS/fu3LhuuSA" crossorigin="anonymous">
+    
+
+    <!-- RSS 2.0 feed -->
+    
+
+    
+
+    
+
+  </head>
+
+  <body>
+
+    
+    <div class="blog-masthead">
+      <div class="container">
+        <nav class="nav blog-nav">
+          <a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
+        </nav>
+      </div>
+    </div>
+    
+
+    
+    
+    <header class="blog-header">
+      <div class="container">
+        <h1 class="blog-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
+        <p class="lead blog-description" dir="auto">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
+      </div>
+    </header>
+    
+    
+
+    
+    <div class="container">
+      <div class="row">
+        <div class="col-sm-8 blog-main">
+
+          
+
+
+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-12-01T11:22:30&#43;02:00">Sun Dec 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20191201">2019-12-01</h2>
+<ul>
+<li>Upgrade CGSpace (linode18) to Ubuntu 18.04:
+<ul>
+<li>Check any packages that have residual configs and purge them:</li>
+<li><!-- raw HTML omitted --># dpkg -l | grep -E &lsquo;^rc&rsquo; | awk &lsquo;{print $2}&rsquo; | xargs dpkg -P<!-- raw HTML omitted --></li>
+<li>Make sure all packages are up to date and the package manager is up to date, then reboot:</li>
+</ul>
+</li>
+</ul>
+<pre><code># apt update &amp;&amp; apt full-upgrade
+# apt-get autoremove &amp;&amp; apt-get autoclean
+# dpkg -C
+# reboot
+</code></pre><ul>
+<li>Take some backups:</li>
+</ul>
+<pre><code># dpkg -l &gt; 2019-12-01-linode18-dpkg.txt
+# tar czf 2019-12-01-linode18-etc.tar.gz /etc
+</code></pre><ul>
+<li>Then check all third-party repositories in /etc/apt to see if everything using &ldquo;xenial&rdquo; has packages available for &ldquo;bionic&rdquo; and then update the sources:</li>
+<li><!-- raw HTML omitted --># sed -i &lsquo;s/xenial/bionic/&rsquo; /etc/apt/sources.list.d/*.list<!-- raw HTML omitted --></li>
+<li>Pause the Uptime Robot monitoring for CGSpace</li>
+<li>Make sure the update manager is installed and do the upgrade:</li>
+</ul>
+<pre><code># apt install update-manager-core
+# do-release-upgrade
+</code></pre><ul>
+<li>After the upgrade finishes, remove Java 11, force the installation of bionic nginx, and reboot the server:</li>
+</ul>
+<pre><code># apt purge openjdk-11-jre-headless
+# apt install 'nginx=1.16.1-1~bionic'
+# reboot
+</code></pre><ul>
+<li>After the server comes back up, remove Python virtualenvs that were created with Python 3.5 and re-run certbot to make sure it's working:</li>
+</ul>
+<pre><code># rm -rf /opt/eff.org/certbot/venv/bin/letsencrypt
+# rm -rf /opt/ilri/dspace-statistics-api/venv
+# /opt/certbot-auto
+</code></pre><ul>
+<li>Clear Ansible's fact cache and re-run the playbooks to update the system's firewalls, SSH config, etc</li>
+</ul>
+<!-- raw HTML omitted -->
+
+  
+
+  
+
+</article> 
+
+
+
+        </div> <!-- /.blog-main -->
+
+        <aside class="col-sm-3 ml-auto blog-sidebar">
+  
+
+  
+        <section class="sidebar-module">
+    <h4>Recent Posts</h4>
+    <ol class="list-unstyled">
+
+
+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
+<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
+
+<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
+
+<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
+
+<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
+
+    </ol>
+  </section>
+
+  
+
+  
+  <section class="sidebar-module">
+    <h4>Links</h4>
+    <ol class="list-unstyled">
+      
+      <li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
+      
+      <li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
+      
+      <li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
+      
+    </ol>
+  </section>
+  
+</aside>
+
+
+      </div> <!-- /.row -->
+    </div> <!-- /.container -->
+    
+
+    
+    <footer class="blog-footer">
+      <p dir="auto">
+      
+      Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
+      
+      </p>
+      <p>
+      <a href="#">Back to top</a>
+      </p>
+    </footer>
+    
+
+  </body>
+
+</html>
--- a/docs/404.html
+++ b/docs/404.html
@ -89,6 +89,8 @@
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -97,8 +99,6 @@

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/categories/index.html
+++ b/docs/categories/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,38 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-12-01T11:22:30&#43;02:00">Sun Dec 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20191201">2019-12-01</h2>
+<ul>
+<li>Upgrade CGSpace (linode18) to Ubuntu 18.04:
+<ul>
+<li>Check any packages that have residual configs and purge them:</li>
+<li><!-- raw HTML omitted --># dpkg -l | grep -E &lsquo;^rc&rsquo; | awk &lsquo;{print $2}&rsquo; | xargs dpkg -P<!-- raw HTML omitted --></li>
+<li>Make sure all packages are up to date and the package manager is up to date, then reboot:</li>
+</ul>
+</li>
+</ul>
+<pre><code># apt update &amp;&amp; apt full-upgrade
+# apt-get autoremove &amp;&amp; apt-get autoclean
+# dpkg -C
+# reboot
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2019-12/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-11/">November, 2019</a></h2>
@ -371,38 +403,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
-    <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in 
-<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
-
-
-</p>
-  </header>
-  <h2 id="20190301">2019-03-01</h2>
-<ul>
-<li>I checked IITA's 259 Feb 14 records from last month for duplicates using Atmire's Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
-<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
-<li>Looking at the other half of Udana's WLE records from 2018-11
-<ul>
-<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
-<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
-<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
-<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
-<li>2003<EFBFBD>2013 instead of 2003–2013</li>
-</ul>
-</li>
-<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  
@ -427,6 +427,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -435,8 +437,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/categories/index.xml
+++ b/docs/categories/index.xml
@ -6,7 +6,7 @@
    <description>Recent content in Categories on CGSpace Notes</description>
    <generator>Hugo -- gohugo.io</generator>
    <language>en-us</language>
-    <lastBuildDate>Mon, 04 Nov 2019 12:20:30 +0200</lastBuildDate>
+    <lastBuildDate>Sun, 01 Dec 2019 11:22:30 +0200</lastBuildDate>
    
 	<atom:link href="https://alanorth.github.io/cgspace-notes/categories/index.xml" rel="self" type="application/rss+xml" />
    
@ -14,7 +14,7 @@
    <item>
      <title>Notes</title>
      <link>https://alanorth.github.io/cgspace-notes/categories/notes/</link>
-      <pubDate>Mon, 04 Nov 2019 12:20:30 +0200</pubDate>
+      <pubDate>Sun, 01 Dec 2019 11:22:30 +0200</pubDate>
      
      <guid>https://alanorth.github.io/cgspace-notes/categories/notes/</guid>
      <description></description>
--- a/docs/categories/notes/index.html
+++ b/docs/categories/notes/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
@ -75,6 +75,38 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-12-01T11:22:30&#43;02:00">Sun Dec 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20191201">2019-12-01</h2>
+<ul>
+<li>Upgrade CGSpace (linode18) to Ubuntu 18.04:
+<ul>
+<li>Check any packages that have residual configs and purge them:</li>
+<li><!-- raw HTML omitted --># dpkg -l | grep -E &lsquo;^rc&rsquo; | awk &lsquo;{print $2}&rsquo; | xargs dpkg -P<!-- raw HTML omitted --></li>
+<li>Make sure all packages are up to date and the package manager is up to date, then reboot:</li>
+</ul>
+</li>
+</ul>
+<pre><code># apt update &amp;&amp; apt full-upgrade
+# apt-get autoremove &amp;&amp; apt-get autoclean
+# dpkg -C
+# reboot
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2019-12/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-11/">November, 2019</a></h2>
@ -356,38 +388,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
-    <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in 
-<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
-
-
-</p>
-  </header>
-  <h2 id="20190301">2019-03-01</h2>
-<ul>
-<li>I checked IITA's 259 Feb 14 records from last month for duplicates using Atmire's Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
-<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
-<li>Looking at the other half of Udana's WLE records from 2018-11
-<ul>
-<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
-<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
-<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
-<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
-<li>2003<EFBFBD>2013 instead of 2003–2013</li>
-</ul>
-</li>
-<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  
@ -412,6 +412,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -420,8 +422,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/categories/notes/index.xml
+++ b/docs/categories/notes/index.xml
@ -6,11 +6,34 @@
    <description>Recent content in Notes on CGSpace Notes</description>
    <generator>Hugo -- gohugo.io</generator>
    <language>en-us</language>
-    <lastBuildDate>Mon, 04 Nov 2019 12:20:30 +0200</lastBuildDate>
+    <lastBuildDate>Sun, 01 Dec 2019 11:22:30 +0200</lastBuildDate>
    
 	<atom:link href="https://alanorth.github.io/cgspace-notes/categories/notes/index.xml" rel="self" type="application/rss+xml" />
    
    
+    <item>
+      <title>December, 2019</title>
+      <link>https://alanorth.github.io/cgspace-notes/2019-12/</link>
+      <pubDate>Sun, 01 Dec 2019 11:22:30 +0200</pubDate>
+      
+      <guid>https://alanorth.github.io/cgspace-notes/2019-12/</guid>
+      <description>&lt;h2 id=&#34;20191201&#34;&gt;2019-12-01&lt;/h2&gt;
+&lt;ul&gt;
+&lt;li&gt;Upgrade CGSpace (linode18) to Ubuntu 18.04:
+&lt;ul&gt;
+&lt;li&gt;Check any packages that have residual configs and purge them:&lt;/li&gt;
+&lt;li&gt;&lt;!-- raw HTML omitted --&gt;# dpkg -l | grep -E &amp;lsquo;^rc&amp;rsquo; | awk &amp;lsquo;{print $2}&amp;rsquo; | xargs dpkg -P&lt;!-- raw HTML omitted --&gt;&lt;/li&gt;
+&lt;li&gt;Make sure all packages are up to date and the package manager is up to date, then reboot:&lt;/li&gt;
+&lt;/ul&gt;
+&lt;/li&gt;
+&lt;/ul&gt;
+&lt;pre&gt;&lt;code&gt;# apt update &amp;amp;&amp;amp; apt full-upgrade
+# apt-get autoremove &amp;amp;&amp;amp; apt-get autoclean
+# dpkg -C
+# reboot
+&lt;/code&gt;&lt;/pre&gt;</description>
+    </item>
+    
    <item>
      <title>November, 2019</title>
      <link>https://alanorth.github.io/cgspace-notes/2019-11/</link>
--- a/docs/categories/notes/page/2/index.html
+++ b/docs/categories/notes/page/2/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
@ -75,6 +75,38 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20190301">2019-03-01</h2>
+<ul>
+<li>I checked IITA's 259 Feb 14 records from last month for duplicates using Atmire's Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
+<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
+<li>Looking at the other half of Udana's WLE records from 2018-11
+<ul>
+<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
+<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
+<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
+<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
+<li>2003<EFBFBD>2013 instead of 2003–2013</li>
+</ul>
+</li>
+<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
@ -350,34 +382,6 @@ sys     2m7.289s



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
-    <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in 
-<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
-
-
-</p>
-  </header>
-  <h2 id="20180501">2018-05-01</h2>
-<ul>
-<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
-<ul>
-<li>http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</li>
-<li>http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</li>
-</ul>
-</li>
-<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
-<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/categories/notes/" rel="prev" role="button">Previous page</a>
@ -402,6 +406,8 @@ sys     2m7.289s
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -410,8 +416,6 @@ sys     2m7.289s

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/categories/notes/page/3/index.html
+++ b/docs/categories/notes/page/3/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
@ -75,6 +75,34 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
+    <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20180501">2018-05-01</h2>
+<ul>
+<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
+<ul>
+<li>http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</li>
+<li>http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</li>
+</ul>
+</li>
+<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
+<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
@ -352,6 +380,8 @@ COPY 54701
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -360,8 +390,6 @@ COPY 54701

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/categories/page/2/index.html
+++ b/docs/categories/page/2/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,38 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20190301">2019-03-01</h2>
+<ul>
+<li>I checked IITA's 259 Feb 14 records from last month for duplicates using Atmire's Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
+<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
+<li>Looking at the other half of Udana's WLE records from 2018-11
+<ul>
+<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
+<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
+<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
+<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
+<li>2003<EFBFBD>2013 instead of 2003–2013</li>
+</ul>
+</li>
+<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
@ -365,34 +397,6 @@ sys     2m7.289s



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
-    <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in 
-<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
-
-
-</p>
-  </header>
-  <h2 id="20180501">2018-05-01</h2>
-<ul>
-<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
-<ul>
-<li>http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</li>
-<li>http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</li>
-</ul>
-</li>
-<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
-<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/categories/" rel="prev" role="button">Previous page</a>
@ -417,6 +421,8 @@ sys     2m7.289s
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -425,8 +431,6 @@ sys     2m7.289s

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/categories/page/3/index.html
+++ b/docs/categories/page/3/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,34 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
+    <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20180501">2018-05-01</h2>
+<ul>
+<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
+<ul>
+<li>http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</li>
+<li>http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</li>
+</ul>
+</li>
+<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
+<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
@ -368,45 +396,6 @@ COPY 54701



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
-    <p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20170801">2017-08-01</h2>
-<ul>
-<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
-<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
-<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
-<li>This means our Tomcat Crawler Session Valve is working</li>
-<li>But many of the bots are browsing dynamic URLs like:
-<ul>
-<li>/handle/10568/3353/discover</li>
-<li>/handle/10568/16510/browse</li>
-</ul>
-</li>
-<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
-<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
-<li>It turns out that we're already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
-<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
-<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
-<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
-<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
-<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
-<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/2/" rel="prev" role="button">Previous page</a>
@ -431,6 +420,8 @@ COPY 54701
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -439,8 +430,6 @@ COPY 54701

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/categories/page/4/index.html
+++ b/docs/categories/page/4/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,45 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
+    <p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20170801">2017-08-01</h2>
+<ul>
+<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
+<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
+<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
+<li>This means our Tomcat Crawler Session Valve is working</li>
+<li>But many of the bots are browsing dynamic URLs like:
+<ul>
+<li>/handle/10568/3353/discover</li>
+<li>/handle/10568/16510/browse</li>
+</ul>
+</li>
+<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
+<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
+<li>It turns out that we're already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
+<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
+<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
+<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
+<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
+<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
+<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
@ -328,36 +367,6 @@ DELETE 1



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
-    <p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20161003">2016-10-03</h2>
-<ul>
-<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
-<li>Need to test the following scenarios to see how author order is affected:
-<ul>
-<li>ORCIDs only</li>
-<li>ORCIDs plus normal authors</li>
-</ul>
-</li>
-<li>I exported a random item's metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
-</ul>
-<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
-</code></pre>
-  <a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/3/" rel="prev" role="button">Previous page</a>
@ -382,6 +391,8 @@ DELETE 1
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -390,8 +401,6 @@ DELETE 1

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/categories/page/5/index.html
+++ b/docs/categories/page/5/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,36 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
+    <p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20161003">2016-10-03</h2>
+<ul>
+<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
+<li>Need to test the following scenarios to see how author order is affected:
+<ul>
+<li>ORCIDs only</li>
+<li>ORCIDs plus normal authors</li>
+</ul>
+</li>
+<li>I exported a random item's metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
+</ul>
+<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
@ -327,33 +357,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
-    <p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20151202">2015-12-02</h2>
-<ul>
-<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
-</ul>
-<pre><code># cd /home/dspacetest.cgiar.org/log
-# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
-</code></pre>
-  <a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/4/" rel="prev" role="button">Previous page</a>
@ -378,6 +381,8 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -386,8 +391,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/categories/page/6/index.html
+++ b/docs/categories/page/6/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,33 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
+    <p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20151202">2015-12-02</h2>
+<ul>
+<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
+</ul>
+<pre><code># cd /home/dspacetest.cgiar.org/log
+# ls -lh dspace.log.2015-11-18*
+-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
+-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
+-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
@ -139,6 +166,8 @@
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -147,8 +176,6 @@

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/cgiar-library-migration/index.html
+++ b/docs/cgiar-library-migration/index.html
@ -274,6 +274,8 @@ dspace=# select setval('handle_seq',86873);
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -282,8 +284,6 @@ dspace=# select setval('handle_seq',86873);

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/cgspace-cgcorev2-migration/index.html
+++ b/docs/cgspace-cgcorev2-migration/index.html
@ -434,6 +434,8 @@
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -442,8 +444,6 @@

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/index.html
+++ b/docs/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,38 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-12-01T11:22:30&#43;02:00">Sun Dec 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20191201">2019-12-01</h2>
+<ul>
+<li>Upgrade CGSpace (linode18) to Ubuntu 18.04:
+<ul>
+<li>Check any packages that have residual configs and purge them:</li>
+<li><!-- raw HTML omitted --># dpkg -l | grep -E &lsquo;^rc&rsquo; | awk &lsquo;{print $2}&rsquo; | xargs dpkg -P<!-- raw HTML omitted --></li>
+<li>Make sure all packages are up to date and the package manager is up to date, then reboot:</li>
+</ul>
+</li>
+</ul>
+<pre><code># apt update &amp;&amp; apt full-upgrade
+# apt-get autoremove &amp;&amp; apt-get autoclean
+# dpkg -C
+# reboot
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2019-12/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-11/">November, 2019</a></h2>
@ -371,38 +403,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
-    <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in 
-<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
-
-
-</p>
-  </header>
-  <h2 id="20190301">2019-03-01</h2>
-<ul>
-<li>I checked IITA's 259 Feb 14 records from last month for duplicates using Atmire's Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
-<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
-<li>Looking at the other half of Udana's WLE records from 2018-11
-<ul>
-<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
-<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
-<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
-<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
-<li>2003<EFBFBD>2013 instead of 2003–2013</li>
-</ul>
-</li>
-<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  
@ -427,6 +427,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -435,8 +437,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/index.xml
+++ b/docs/index.xml
@ -6,11 +6,34 @@
    <description>Recent content on CGSpace Notes</description>
    <generator>Hugo -- gohugo.io</generator>
    <language>en-us</language>
-    <lastBuildDate>Mon, 04 Nov 2019 12:20:30 +0200</lastBuildDate>
+    <lastBuildDate>Sun, 01 Dec 2019 11:22:30 +0200</lastBuildDate>
    
 	<atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" />
    
    
+    <item>
+      <title>December, 2019</title>
+      <link>https://alanorth.github.io/cgspace-notes/2019-12/</link>
+      <pubDate>Sun, 01 Dec 2019 11:22:30 +0200</pubDate>
+      
+      <guid>https://alanorth.github.io/cgspace-notes/2019-12/</guid>
+      <description>&lt;h2 id=&#34;20191201&#34;&gt;2019-12-01&lt;/h2&gt;
+&lt;ul&gt;
+&lt;li&gt;Upgrade CGSpace (linode18) to Ubuntu 18.04:
+&lt;ul&gt;
+&lt;li&gt;Check any packages that have residual configs and purge them:&lt;/li&gt;
+&lt;li&gt;&lt;!-- raw HTML omitted --&gt;# dpkg -l | grep -E &amp;lsquo;^rc&amp;rsquo; | awk &amp;lsquo;{print $2}&amp;rsquo; | xargs dpkg -P&lt;!-- raw HTML omitted --&gt;&lt;/li&gt;
+&lt;li&gt;Make sure all packages are up to date and the package manager is up to date, then reboot:&lt;/li&gt;
+&lt;/ul&gt;
+&lt;/li&gt;
+&lt;/ul&gt;
+&lt;pre&gt;&lt;code&gt;# apt update &amp;amp;&amp;amp; apt full-upgrade
+# apt-get autoremove &amp;amp;&amp;amp; apt-get autoclean
+# dpkg -C
+# reboot
+&lt;/code&gt;&lt;/pre&gt;</description>
+    </item>
+    
    <item>
      <title>November, 2019</title>
      <link>https://alanorth.github.io/cgspace-notes/2019-11/</link>
--- a/docs/page/2/index.html
+++ b/docs/page/2/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,38 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20190301">2019-03-01</h2>
+<ul>
+<li>I checked IITA's 259 Feb 14 records from last month for duplicates using Atmire's Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
+<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
+<li>Looking at the other half of Udana's WLE records from 2018-11
+<ul>
+<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
+<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
+<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
+<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
+<li>2003<EFBFBD>2013 instead of 2003–2013</li>
+</ul>
+</li>
+<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
@ -365,34 +397,6 @@ sys     2m7.289s



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
-    <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in 
-<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
-
-
-</p>
-  </header>
-  <h2 id="20180501">2018-05-01</h2>
-<ul>
-<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
-<ul>
-<li>http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</li>
-<li>http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</li>
-</ul>
-</li>
-<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
-<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/" rel="prev" role="button">Previous page</a>
@ -417,6 +421,8 @@ sys     2m7.289s
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -425,8 +431,6 @@ sys     2m7.289s

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/page/3/index.html
+++ b/docs/page/3/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,34 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
+    <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20180501">2018-05-01</h2>
+<ul>
+<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
+<ul>
+<li>http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</li>
+<li>http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</li>
+</ul>
+</li>
+<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
+<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
@ -368,45 +396,6 @@ COPY 54701



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
-    <p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20170801">2017-08-01</h2>
-<ul>
-<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
-<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
-<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
-<li>This means our Tomcat Crawler Session Valve is working</li>
-<li>But many of the bots are browsing dynamic URLs like:
-<ul>
-<li>/handle/10568/3353/discover</li>
-<li>/handle/10568/16510/browse</li>
-</ul>
-</li>
-<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
-<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
-<li>It turns out that we're already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
-<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
-<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
-<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
-<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
-<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
-<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/page/2/" rel="prev" role="button">Previous page</a>
@ -431,6 +420,8 @@ COPY 54701
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -439,8 +430,6 @@ COPY 54701

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/page/4/index.html
+++ b/docs/page/4/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,45 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
+    <p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20170801">2017-08-01</h2>
+<ul>
+<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
+<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
+<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
+<li>This means our Tomcat Crawler Session Valve is working</li>
+<li>But many of the bots are browsing dynamic URLs like:
+<ul>
+<li>/handle/10568/3353/discover</li>
+<li>/handle/10568/16510/browse</li>
+</ul>
+</li>
+<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
+<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
+<li>It turns out that we're already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
+<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
+<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
+<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
+<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
+<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
+<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
@ -328,36 +367,6 @@ DELETE 1



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
-    <p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20161003">2016-10-03</h2>
-<ul>
-<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
-<li>Need to test the following scenarios to see how author order is affected:
-<ul>
-<li>ORCIDs only</li>
-<li>ORCIDs plus normal authors</li>
-</ul>
-</li>
-<li>I exported a random item's metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
-</ul>
-<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
-</code></pre>
-  <a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/page/3/" rel="prev" role="button">Previous page</a>
@ -382,6 +391,8 @@ DELETE 1
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -390,8 +401,6 @@ DELETE 1

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/page/5/index.html
+++ b/docs/page/5/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,36 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
+    <p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20161003">2016-10-03</h2>
+<ul>
+<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
+<li>Need to test the following scenarios to see how author order is affected:
+<ul>
+<li>ORCIDs only</li>
+<li>ORCIDs plus normal authors</li>
+</ul>
+</li>
+<li>I exported a random item's metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
+</ul>
+<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
@ -327,33 +357,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
-    <p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20151202">2015-12-02</h2>
-<ul>
-<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
-</ul>
-<pre><code># cd /home/dspacetest.cgiar.org/log
-# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
-</code></pre>
-  <a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/page/4/" rel="prev" role="button">Previous page</a>
@ -378,6 +381,8 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -386,8 +391,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/page/6/index.html
+++ b/docs/page/6/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,33 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
+    <p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20151202">2015-12-02</h2>
+<ul>
+<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
+</ul>
+<pre><code># cd /home/dspacetest.cgiar.org/log
+# ls -lh dspace.log.2015-11-18*
+-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
+-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
+-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
@ -139,6 +166,8 @@
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -147,8 +176,6 @@

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/posts/index.html
+++ b/docs/posts/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,38 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-12-01T11:22:30&#43;02:00">Sun Dec 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20191201">2019-12-01</h2>
+<ul>
+<li>Upgrade CGSpace (linode18) to Ubuntu 18.04:
+<ul>
+<li>Check any packages that have residual configs and purge them:</li>
+<li><!-- raw HTML omitted --># dpkg -l | grep -E &lsquo;^rc&rsquo; | awk &lsquo;{print $2}&rsquo; | xargs dpkg -P<!-- raw HTML omitted --></li>
+<li>Make sure all packages are up to date and the package manager is up to date, then reboot:</li>
+</ul>
+</li>
+</ul>
+<pre><code># apt update &amp;&amp; apt full-upgrade
+# apt-get autoremove &amp;&amp; apt-get autoclean
+# dpkg -C
+# reboot
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2019-12/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-11/">November, 2019</a></h2>
@ -371,38 +403,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
-    <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in 
-<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
-
-
-</p>
-  </header>
-  <h2 id="20190301">2019-03-01</h2>
-<ul>
-<li>I checked IITA's 259 Feb 14 records from last month for duplicates using Atmire's Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
-<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
-<li>Looking at the other half of Udana's WLE records from 2018-11
-<ul>
-<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
-<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
-<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
-<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
-<li>2003<EFBFBD>2013 instead of 2003–2013</li>
-</ul>
-</li>
-<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  
@ -427,6 +427,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -435,8 +437,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/posts/index.xml
+++ b/docs/posts/index.xml
@ -6,11 +6,34 @@
    <description>Recent content in Posts on CGSpace Notes</description>
    <generator>Hugo -- gohugo.io</generator>
    <language>en-us</language>
-    <lastBuildDate>Mon, 04 Nov 2019 12:20:30 +0200</lastBuildDate>
+    <lastBuildDate>Sun, 01 Dec 2019 11:22:30 +0200</lastBuildDate>
    
 	<atom:link href="https://alanorth.github.io/cgspace-notes/posts/index.xml" rel="self" type="application/rss+xml" />
    
    
+    <item>
+      <title>December, 2019</title>
+      <link>https://alanorth.github.io/cgspace-notes/2019-12/</link>
+      <pubDate>Sun, 01 Dec 2019 11:22:30 +0200</pubDate>
+      
+      <guid>https://alanorth.github.io/cgspace-notes/2019-12/</guid>
+      <description>&lt;h2 id=&#34;20191201&#34;&gt;2019-12-01&lt;/h2&gt;
+&lt;ul&gt;
+&lt;li&gt;Upgrade CGSpace (linode18) to Ubuntu 18.04:
+&lt;ul&gt;
+&lt;li&gt;Check any packages that have residual configs and purge them:&lt;/li&gt;
+&lt;li&gt;&lt;!-- raw HTML omitted --&gt;# dpkg -l | grep -E &amp;lsquo;^rc&amp;rsquo; | awk &amp;lsquo;{print $2}&amp;rsquo; | xargs dpkg -P&lt;!-- raw HTML omitted --&gt;&lt;/li&gt;
+&lt;li&gt;Make sure all packages are up to date and the package manager is up to date, then reboot:&lt;/li&gt;
+&lt;/ul&gt;
+&lt;/li&gt;
+&lt;/ul&gt;
+&lt;pre&gt;&lt;code&gt;# apt update &amp;amp;&amp;amp; apt full-upgrade
+# apt-get autoremove &amp;amp;&amp;amp; apt-get autoclean
+# dpkg -C
+# reboot
+&lt;/code&gt;&lt;/pre&gt;</description>
+    </item>
+    
    <item>
      <title>November, 2019</title>
      <link>https://alanorth.github.io/cgspace-notes/2019-11/</link>
--- a/docs/posts/page/2/index.html
+++ b/docs/posts/page/2/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,38 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20190301">2019-03-01</h2>
+<ul>
+<li>I checked IITA's 259 Feb 14 records from last month for duplicates using Atmire's Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
+<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
+<li>Looking at the other half of Udana's WLE records from 2018-11
+<ul>
+<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
+<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
+<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
+<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
+<li>2003<EFBFBD>2013 instead of 2003–2013</li>
+</ul>
+</li>
+<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
@ -365,34 +397,6 @@ sys     2m7.289s



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
-    <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in 
-<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
-
-
-</p>
-  </header>
-  <h2 id="20180501">2018-05-01</h2>
-<ul>
-<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
-<ul>
-<li>http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</li>
-<li>http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</li>
-</ul>
-</li>
-<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
-<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/posts/" rel="prev" role="button">Previous page</a>
@ -417,6 +421,8 @@ sys     2m7.289s
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -425,8 +431,6 @@ sys     2m7.289s

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/posts/page/3/index.html
+++ b/docs/posts/page/3/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,34 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
+    <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20180501">2018-05-01</h2>
+<ul>
+<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
+<ul>
+<li>http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</li>
+<li>http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</li>
+</ul>
+</li>
+<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
+<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
@ -368,45 +396,6 @@ COPY 54701



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
-    <p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20170801">2017-08-01</h2>
-<ul>
-<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
-<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
-<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
-<li>This means our Tomcat Crawler Session Valve is working</li>
-<li>But many of the bots are browsing dynamic URLs like:
-<ul>
-<li>/handle/10568/3353/discover</li>
-<li>/handle/10568/16510/browse</li>
-</ul>
-</li>
-<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
-<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
-<li>It turns out that we're already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
-<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
-<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
-<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
-<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
-<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
-<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/2/" rel="prev" role="button">Previous page</a>
@ -431,6 +420,8 @@ COPY 54701
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -439,8 +430,6 @@ COPY 54701

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/posts/page/4/index.html
+++ b/docs/posts/page/4/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,45 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
+    <p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20170801">2017-08-01</h2>
+<ul>
+<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
+<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
+<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
+<li>This means our Tomcat Crawler Session Valve is working</li>
+<li>But many of the bots are browsing dynamic URLs like:
+<ul>
+<li>/handle/10568/3353/discover</li>
+<li>/handle/10568/16510/browse</li>
+</ul>
+</li>
+<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
+<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
+<li>It turns out that we're already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
+<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
+<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
+<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
+<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
+<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
+<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
@ -328,36 +367,6 @@ DELETE 1



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
-    <p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20161003">2016-10-03</h2>
-<ul>
-<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
-<li>Need to test the following scenarios to see how author order is affected:
-<ul>
-<li>ORCIDs only</li>
-<li>ORCIDs plus normal authors</li>
-</ul>
-</li>
-<li>I exported a random item's metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
-</ul>
-<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
-</code></pre>
-  <a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/3/" rel="prev" role="button">Previous page</a>
@ -382,6 +391,8 @@ DELETE 1
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -390,8 +401,6 @@ DELETE 1

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/posts/page/5/index.html
+++ b/docs/posts/page/5/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,36 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
+    <p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20161003">2016-10-03</h2>
+<ul>
+<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
+<li>Need to test the following scenarios to see how author order is affected:
+<ul>
+<li>ORCIDs only</li>
+<li>ORCIDs plus normal authors</li>
+</ul>
+</li>
+<li>I exported a random item's metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
+</ul>
+<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
@ -327,33 +357,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
-    <p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20151202">2015-12-02</h2>
-<ul>
-<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
-</ul>
-<pre><code># cd /home/dspacetest.cgiar.org/log
-# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
-</code></pre>
-  <a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/4/" rel="prev" role="button">Previous page</a>
@ -378,6 +381,8 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -386,8 +391,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/posts/page/6/index.html
+++ b/docs/posts/page/6/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2019-11-04T12:20:30+02:00" />
+<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />

 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2019-11-04T12:20:30+02:00",
+  "dateModified": "2019-12-01T11:22:30+02:00",
  "keywords": "notes,migration,notes,",
  "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
 }
@ -90,6 +90,33 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
+    <p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20151202">2015-12-02</h2>
+<ul>
+<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
+</ul>
+<pre><code># cd /home/dspacetest.cgiar.org/log
+# ls -lh dspace.log.2015-11-18*
+-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
+-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
+-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
@ -139,6 +166,8 @@
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -147,8 +176,6 @@

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/robots.txt
+++ b/docs/robots.txt
@ -3,9 +3,10 @@ User-agent: *

 Disallow: /cgspace-notes/categories/
 Disallow: /cgspace-notes/
+Disallow: /cgspace-notes/2019-12/
 Disallow: /cgspace-notes/categories/notes/
-Disallow: /cgspace-notes/2019-11/
 Disallow: /cgspace-notes/posts/
+Disallow: /cgspace-notes/2019-11/
 Disallow: /cgspace-notes/cgspace-cgcorev2-migration/
 Disallow: /cgspace-notes/tags/migration/
 Disallow: /cgspace-notes/tags/
--- a/docs/sitemap.xml
+++ b/docs/sitemap.xml
@ -4,27 +4,32 @@
  
  <url>
    <loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
-    <lastmod>2019-11-27T14:56:00+02:00</lastmod>
+    <lastmod>2019-12-01T11:22:30+02:00</lastmod>
  </url>
  
  <url>
    <loc>https://alanorth.github.io/cgspace-notes/</loc>
-    <lastmod>2019-11-27T14:56:00+02:00</lastmod>
+    <lastmod>2019-12-01T11:22:30+02:00</lastmod>
+  </url>
+  
+  <url>
+    <loc>https://alanorth.github.io/cgspace-notes/2019-12/</loc>
+    <lastmod>2019-12-01T11:22:30+02:00</lastmod>
  </url>
  
  <url>
    <loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
-    <lastmod>2019-11-27T14:56:00+02:00</lastmod>
-  </url>
-  
-  <url>
-    <loc>https://alanorth.github.io/cgspace-notes/2019-11/</loc>
-    <lastmod>2019-11-27T14:56:00+02:00</lastmod>
+    <lastmod>2019-12-01T11:22:30+02:00</lastmod>
  </url>
  
  <url>
    <loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
-    <lastmod>2019-11-27T14:56:00+02:00</lastmod>
+    <lastmod>2019-12-01T11:22:30+02:00</lastmod>
+  </url>
+  
+  <url>
+    <loc>https://alanorth.github.io/cgspace-notes/2019-11/</loc>
+    <lastmod>2019-11-28T17:30:45+02:00</lastmod>
  </url>
  
  <url>
--- a/docs/tags/index.html
+++ b/docs/tags/index.html
@ -90,6 +90,38 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-12-01T11:22:30&#43;02:00">Sun Dec 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20191201">2019-12-01</h2>
+<ul>
+<li>Upgrade CGSpace (linode18) to Ubuntu 18.04:
+<ul>
+<li>Check any packages that have residual configs and purge them:</li>
+<li><!-- raw HTML omitted --># dpkg -l | grep -E &lsquo;^rc&rsquo; | awk &lsquo;{print $2}&rsquo; | xargs dpkg -P<!-- raw HTML omitted --></li>
+<li>Make sure all packages are up to date and the package manager is up to date, then reboot:</li>
+</ul>
+</li>
+</ul>
+<pre><code># apt update &amp;&amp; apt full-upgrade
+# apt-get autoremove &amp;&amp; apt-get autoclean
+# dpkg -C
+# reboot
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2019-12/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-11/">November, 2019</a></h2>
@ -371,38 +403,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
-    <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in 
-<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
-
-
-</p>
-  </header>
-  <h2 id="20190301">2019-03-01</h2>
-<ul>
-<li>I checked IITA's 259 Feb 14 records from last month for duplicates using Atmire's Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
-<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
-<li>Looking at the other half of Udana's WLE records from 2018-11
-<ul>
-<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
-<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
-<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
-<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
-<li>2003<EFBFBD>2013 instead of 2003–2013</li>
-</ul>
-</li>
-<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  
@ -427,6 +427,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -435,8 +437,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/tags/migration/index.html
+++ b/docs/tags/migration/index.html
@ -129,6 +129,8 @@
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -137,8 +139,6 @@

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/tags/notes/index.html
+++ b/docs/tags/notes/index.html
@ -379,6 +379,8 @@ DELETE 1
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -387,8 +389,6 @@ DELETE 1

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/tags/notes/page/2/index.html
+++ b/docs/tags/notes/page/2/index.html
@ -365,6 +365,8 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -373,8 +375,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/tags/notes/page/3/index.html
+++ b/docs/tags/notes/page/3/index.html
@ -174,6 +174,8 @@
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -182,8 +184,6 @@

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/tags/page/2/index.html
+++ b/docs/tags/page/2/index.html
@ -90,6 +90,38 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
+    <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20190301">2019-03-01</h2>
+<ul>
+<li>I checked IITA's 259 Feb 14 records from last month for duplicates using Atmire's Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
+<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
+<li>Looking at the other half of Udana's WLE records from 2018-11
+<ul>
+<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
+<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
+<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
+<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
+<li>2003<EFBFBD>2013 instead of 2003–2013</li>
+</ul>
+</li>
+<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
@ -365,34 +397,6 @@ sys     2m7.289s



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
-    <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in 
-<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
-
-
-</p>
-  </header>
-  <h2 id="20180501">2018-05-01</h2>
-<ul>
-<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
-<ul>
-<li>http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</li>
-<li>http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</li>
-</ul>
-</li>
-<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
-<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/tags/" rel="prev" role="button">Previous page</a>
@ -417,6 +421,8 @@ sys     2m7.289s
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -425,8 +431,6 @@ sys     2m7.289s

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/tags/page/3/index.html
+++ b/docs/tags/page/3/index.html
@ -90,6 +90,34 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
+    <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in 
+<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
+
+
+</p>
+  </header>
+  <h2 id="20180501">2018-05-01</h2>
+<ul>
+<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
+<ul>
+<li>http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</li>
+<li>http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</li>
+</ul>
+</li>
+<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
+<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
@ -368,45 +396,6 @@ COPY 54701



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
-    <p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20170801">2017-08-01</h2>
-<ul>
-<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
-<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
-<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
-<li>This means our Tomcat Crawler Session Valve is working</li>
-<li>But many of the bots are browsing dynamic URLs like:
-<ul>
-<li>/handle/10568/3353/discover</li>
-<li>/handle/10568/16510/browse</li>
-</ul>
-</li>
-<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
-<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
-<li>It turns out that we're already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
-<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
-<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
-<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
-<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
-<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
-<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
-</ul>
-  <a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/2/" rel="prev" role="button">Previous page</a>
@ -431,6 +420,8 @@ COPY 54701
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -439,8 +430,6 @@ COPY 54701

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/tags/page/4/index.html
+++ b/docs/tags/page/4/index.html
@ -90,6 +90,45 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
+    <p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20170801">2017-08-01</h2>
+<ul>
+<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
+<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
+<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
+<li>This means our Tomcat Crawler Session Valve is working</li>
+<li>But many of the bots are browsing dynamic URLs like:
+<ul>
+<li>/handle/10568/3353/discover</li>
+<li>/handle/10568/16510/browse</li>
+</ul>
+</li>
+<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
+<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
+<li>It turns out that we're already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
+<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
+<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
+<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
+<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
+<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
+<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
+</ul>
+  <a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
@ -328,36 +367,6 @@ DELETE 1



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
-    <p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20161003">2016-10-03</h2>
-<ul>
-<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
-<li>Need to test the following scenarios to see how author order is affected:
-<ul>
-<li>ORCIDs only</li>
-<li>ORCIDs plus normal authors</li>
-</ul>
-</li>
-<li>I exported a random item's metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
-</ul>
-<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
-</code></pre>
-  <a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/3/" rel="prev" role="button">Previous page</a>
@ -382,6 +391,8 @@ DELETE 1
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -390,8 +401,6 @@ DELETE 1

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/tags/page/5/index.html
+++ b/docs/tags/page/5/index.html
@ -90,6 +90,36 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
+    <p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20161003">2016-10-03</h2>
+<ul>
+<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
+<li>Need to test the following scenarios to see how author order is affected:
+<ul>
+<li>ORCIDs only</li>
+<li>ORCIDs plus normal authors</li>
+</ul>
+</li>
+<li>I exported a random item's metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
+</ul>
+<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
@ -327,33 +357,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and



-
-<article class="blog-post">
-  <header>
-    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
-    <p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in 
-
-<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
-
-</p>
-  </header>
-  <h2 id="20151202">2015-12-02</h2>
-<ul>
-<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
-</ul>
-<pre><code># cd /home/dspacetest.cgiar.org/log
-# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
-</code></pre>
-  <a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
-</article> 
-
-
-
-
-
 <nav class="blog-pagination">
  
  <a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/4/" rel="prev" role="button">Previous page</a>
@ -378,6 +381,8 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -386,8 +391,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>

--- a/docs/tags/page/6/index.html
+++ b/docs/tags/page/6/index.html
@ -90,6 +90,33 @@



+<article class="blog-post">
+  <header>
+    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
+    <p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in 
+
+<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
+
+</p>
+  </header>
+  <h2 id="20151202">2015-12-02</h2>
+<ul>
+<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
+</ul>
+<pre><code># cd /home/dspacetest.cgiar.org/log
+# ls -lh dspace.log.2015-11-18*
+-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
+-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
+-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
+</code></pre>
+  <a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
+</article> 
+
+
+
+
+
+
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
@ -139,6 +166,8 @@
    <ol class="list-unstyled">


+<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
+
 <li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>

 <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
@ -147,8 +176,6 @@

 <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>

-<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
-
    </ol>
  </section>