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Export a CSV of the IITA community metadata for Martin Mueller
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Export a CSV of the IITA community metadata for Martin Mueller
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<h1 class="blog-title"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
<p class="lead blog-description">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
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<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
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<h2 id="2018-03-02">2018-03-02</h2>
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<ul>
<li>Export a CSV of the IITA community metadata for Martin Mueller</li>
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<p></p>
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<h2 id="2018-03-06">2018-03-06</h2>
<ul>
<li>Add three new CCAFS project tags to <code>input-forms.xml</code> (<a href="https://github.com/ilri/DSpace/pull/357">#357</a>)</li>
<li>Andrea from Macaroni Bros had sent me an email that CCAFS needs them</li>
2018-03-06 11:25:26 +01:00
<li>Give Udana more feedback on his WLE records from last month</li>
<li>There were some records using a non-breaking space in their AGROVOC subject field</li>
<li>I checked and tested some author corrections from Peter from last week, and then applied them on CGSpace</li>
</ul>
<pre><code>$ ./fix-metadata-values.py -i Correct-309-authors-2018-03-06.csv -db dspace -u dspace -p 'fuuu' -f dc.contributor.author -t correct -m 3
$ ./delete-metadata-values.py -i Delete-3-Authors-2018-03-06.csv -db dspace -u dspace-p 'fuuu' -f dc.contributor.author -m 3
</code></pre>
<ul>
<li>This time there were no errors in whitespace but I did have to correct one incorrectly encoded accent character</li>
2018-03-06 13:45:51 +01:00
<li>Add new CRP subject &ldquo;GRAIN LEGUMES AND DRYLAND CEREALS&rdquo; to <code>input-forms.xml</code> (<a href="https://github.com/ilri/DSpace/pull/358">#358</a>)</li>
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<li>Merge the ORCID integration stuff in to <code>5_x-prod</code> for deployment on CGSpace soon (<a href="https://github.com/ilri/DSpace/pull/359">#359</a>)</li>
<li>Deploy ORCID changes on CGSpace (linode18), run all system updates, and reboot the server</li>
<li>Run all system updates on DSpace Test and reboot server</li>
<li>I ran the <a href="https://gist.github.com/alanorth/24d8081a5dc25e2a4e27e548e7e2389c">orcid-authority-to-item.py</a> script on CGSpace and mapped 2,864 ORCID identifiers from Solr to item metadata</li>
</ul>
<pre><code>$ ./orcid-authority-to-item.py -db dspace -u dspace -p 'fuuu' -s http://localhost:8081/solr -d
</code></pre>
<ul>
<li>I ran the DSpace cleanup script on CGSpace and it threw an error (as always):</li>
</ul>
<pre><code>Error: ERROR: update or delete on table &quot;bitstream&quot; violates foreign key constraint &quot;bundle_primary_bitstream_id_fkey&quot; on table &quot;bundle&quot;
Detail: Key (bitstream_id)=(150659) is still referenced from table &quot;bundle&quot;.
</code></pre>
<ul>
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<li><p>The solution is, as always:</p>
<pre><code>$ psql dspace -c 'update bundle set primary_bitstream_id=NULL where primary_bitstream_id in (150659);'
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UPDATE 1
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</code></pre></li>
<li><p>Apply the proposed PostgreSQL indexes from DS-3636 (pull request <a href="https://github.com/DSpace/DSpace/pull/1791/">#1791</a> on CGSpace (linode18)</p></li>
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<li><a href="/cgspace-notes/2018-03/">March, 2018</a></li>
<li><a href="/cgspace-notes/2018-02/">February, 2018</a></li>
<li><a href="/cgspace-notes/2018-01/">January, 2018</a></li>
<li><a href="/cgspace-notes/2017-12/">December, 2017</a></li>
<li><a href="/cgspace-notes/2017-11/">November, 2017</a></li>
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<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
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