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247 lines
6.7 KiB
HTML
247 lines
6.7 KiB
HTML
<!DOCTYPE html>
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<html lang="en">
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<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
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<meta property="og:title" content="March, 2018" />
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<meta property="og:description" content="2018-03-02
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Export a CSV of the IITA community metadata for Martin Mueller
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" />
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<meta property="og:type" content="article" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-03/" />
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<meta property="article:published_time" content="2018-03-02T16:07:54+02:00"/>
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<meta property="article:modified_time" content="2018-03-06T21:48:10+02:00"/>
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<meta name="twitter:card" content="summary"/>
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<meta name="twitter:title" content="March, 2018"/>
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<meta name="twitter:description" content="2018-03-02
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Export a CSV of the IITA community metadata for Martin Mueller
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"/>
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<meta name="generator" content="Hugo 0.37" />
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<script type="application/ld+json">
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{
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"@context": "http://schema.org",
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"@type": "BlogPosting",
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"headline": "March, 2018",
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"url": "https://alanorth.github.io/cgspace-notes/2018-03/",
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"wordCount": "275",
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"datePublished": "2018-03-02T16:07:54+02:00",
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"dateModified": "2018-03-06T21:48:10+02:00",
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"author": {
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"@type": "Person",
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"name": "Alan Orth"
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},
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"keywords": "Notes"
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}
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</script>
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<link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2018-03/">
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<title>March, 2018 | CGSpace Notes</title>
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<link href="https://alanorth.github.io/cgspace-notes/css/style.css" rel="stylesheet" integrity="sha384-CoMzlF7G4xk3ftqRr7leobnWP85AuISUJljMFjtTG/UHyP/+bBwWAvBlXkB4VQQk" crossorigin="anonymous">
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</head>
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<body>
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<div class="blog-masthead">
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<div class="container">
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<nav class="nav blog-nav">
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<a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
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</nav>
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</div>
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</div>
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<header class="blog-header">
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<div class="container">
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<h1 class="blog-title"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
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<p class="lead blog-description">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
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</div>
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</header>
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<div class="container">
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<div class="row">
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<div class="col-sm-8 blog-main">
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<article class="blog-post">
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<header>
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<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
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<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54+02:00">Fri Mar 02, 2018</time> by Alan Orth in
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<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
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</p>
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</header>
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<h2 id="2018-03-02">2018-03-02</h2>
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<ul>
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<li>Export a CSV of the IITA community metadata for Martin Mueller</li>
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</ul>
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<p></p>
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<h2 id="2018-03-06">2018-03-06</h2>
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<ul>
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<li>Add three new CCAFS project tags to <code>input-forms.xml</code> (<a href="https://github.com/ilri/DSpace/pull/357">#357</a>)</li>
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<li>Andrea from Macaroni Bros had sent me an email that CCAFS needs them</li>
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<li>Give Udana more feedback on his WLE records from last month</li>
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<li>There were some records using a non-breaking space in their AGROVOC subject field</li>
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<li>I checked and tested some author corrections from Peter from last week, and then applied them on CGSpace</li>
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</ul>
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<pre><code>$ ./fix-metadata-values.py -i Correct-309-authors-2018-03-06.csv -db dspace -u dspace -p 'fuuu' -f dc.contributor.author -t correct -m 3
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$ ./delete-metadata-values.py -i Delete-3-Authors-2018-03-06.csv -db dspace -u dspace-p 'fuuu' -f dc.contributor.author -m 3
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</code></pre>
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<ul>
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<li>This time there were no errors in whitespace but I did have to correct one incorrectly encoded accent character</li>
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<li>Add new CRP subject “GRAIN LEGUMES AND DRYLAND CEREALS” to <code>input-forms.xml</code> (<a href="https://github.com/ilri/DSpace/pull/358">#358</a>)</li>
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<li>Merge the ORCID integration stuff in to <code>5_x-prod</code> for deployment on CGSpace soon (<a href="https://github.com/ilri/DSpace/pull/359">#359</a>)</li>
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<li>Deploy ORCID changes on CGSpace (linode18), run all system updates, and reboot the server</li>
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<li>Run all system updates on DSpace Test and reboot server</li>
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<li>I ran the <a href="https://gist.github.com/alanorth/24d8081a5dc25e2a4e27e548e7e2389c">orcid-authority-to-item.py</a> script on CGSpace and mapped 2,864 ORCID identifiers from Solr to item metadata</li>
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</ul>
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<pre><code>$ ./orcid-authority-to-item.py -db dspace -u dspace -p 'fuuu' -s http://localhost:8081/solr -d
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</code></pre>
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<ul>
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<li>I ran the DSpace cleanup script on CGSpace and it threw an error (as always):</li>
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</ul>
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<pre><code>Error: ERROR: update or delete on table "bitstream" violates foreign key constraint "bundle_primary_bitstream_id_fkey" on table "bundle"
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Detail: Key (bitstream_id)=(150659) is still referenced from table "bundle".
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</code></pre>
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<ul>
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<li><p>The solution is, as always:</p>
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<pre><code>$ psql dspace -c 'update bundle set primary_bitstream_id=NULL where primary_bitstream_id in (150659);'
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UPDATE 1
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</code></pre></li>
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<li><p>Apply the proposed PostgreSQL indexes from DS-3636 (pull request <a href="https://github.com/DSpace/DSpace/pull/1791/">#1791</a> on CGSpace (linode18)</p></li>
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</ul>
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</article>
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</div> <!-- /.blog-main -->
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<aside class="col-sm-3 ml-auto blog-sidebar">
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<section class="sidebar-module">
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2018-03/">March, 2018</a></li>
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<li><a href="/cgspace-notes/2018-02/">February, 2018</a></li>
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<li><a href="/cgspace-notes/2018-01/">January, 2018</a></li>
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<li><a href="/cgspace-notes/2017-12/">December, 2017</a></li>
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<li><a href="/cgspace-notes/2017-11/">November, 2017</a></li>
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</ol>
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</section>
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<section class="sidebar-module">
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<h4>Links</h4>
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<ol class="list-unstyled">
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<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
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<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
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<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
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</ol>
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</section>
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</aside>
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</div> <!-- /.row -->
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</div> <!-- /.container -->
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Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
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