2018-03-02 15:09:18 +01:00
<!DOCTYPE html>
< html lang = "en" >
< head >
< meta charset = "utf-8" >
< meta name = "viewport" content = "width=device-width, initial-scale=1, shrink-to-fit=no" >
< meta property = "og:title" content = "March, 2018" / >
2018-03-06 09:17:14 +01:00
< meta property = "og:description" content = "2018-03-02
2018-03-02 15:09:18 +01:00
Export a CSV of the IITA community metadata for Martin Mueller
" />
< meta property = "og:type" content = "article" / >
< meta property = "og:url" content = "https://alanorth.github.io/cgspace-notes/2018-03/" / >
< meta property = "article:published_time" content = "2018-03-02T16:07:54+02:00" / >
2018-03-06 20:48:10 +01:00
< meta property = "article:modified_time" content = "2018-03-06T14:45:51+02:00" / >
2018-03-02 15:09:18 +01:00
< meta name = "twitter:card" content = "summary" / >
< meta name = "twitter:title" content = "March, 2018" / >
2018-03-06 09:17:14 +01:00
< meta name = "twitter:description" content = "2018-03-02
2018-03-02 15:09:18 +01:00
Export a CSV of the IITA community metadata for Martin Mueller
"/>
< meta name = "generator" content = "Hugo 0.37" / >
< script type = "application/ld+json" >
{
"@context": "http://schema.org",
"@type": "BlogPosting",
"headline": "March, 2018",
"url": "https://alanorth.github.io/cgspace-notes/2018-03/",
2018-03-06 20:48:10 +01:00
"wordCount": "262",
2018-03-02 15:09:18 +01:00
"datePublished": "2018-03-02T16:07:54+ 02:00",
2018-03-06 20:48:10 +01:00
"dateModified": "2018-03-06T14:45:51+ 02:00",
2018-03-02 15:09:18 +01:00
"author": {
"@type": "Person",
"name": "Alan Orth"
},
"keywords": "Notes"
}
< / script >
< link rel = "canonical" href = "https://alanorth.github.io/cgspace-notes/2018-03/" >
< title > March, 2018 | CGSpace Notes< / title >
<!-- combined, minified CSS -->
< link href = "https://alanorth.github.io/cgspace-notes/css/style.css" rel = "stylesheet" integrity = "sha384-CoMzlF7G4xk3ftqRr7leobnWP85AuISUJljMFjtTG/UHyP/+bBwWAvBlXkB4VQQk" crossorigin = "anonymous" >
< / head >
< body >
< div class = "blog-masthead" >
< div class = "container" >
< nav class = "nav blog-nav" >
< a class = "nav-link " href = "https://alanorth.github.io/cgspace-notes/" > Home< / a >
< / nav >
< / div >
< / div >
< header class = "blog-header" >
< div class = "container" >
< h1 class = "blog-title" > < a href = "https://alanorth.github.io/cgspace-notes/" rel = "home" > CGSpace Notes< / a > < / h1 >
< p class = "lead blog-description" > Documenting day-to-day work on the < a href = "https://cgspace.cgiar.org" > CGSpace< / a > repository.< / p >
< / div >
< / header >
< div class = "container" >
< div class = "row" >
< div class = "col-sm-8 blog-main" >
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" > < a href = "https://alanorth.github.io/cgspace-notes/2018-03/" > March, 2018< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2018-03-02T16:07:54+02:00" > Fri Mar 02, 2018< / time > by Alan Orth in
< i class = "fa fa-tag" aria-hidden = "true" > < / i > < a href = "/cgspace-notes/tags/notes" rel = "tag" > Notes< / a >
< / p >
< / header >
2018-03-06 09:17:14 +01:00
< h2 id = "2018-03-02" > 2018-03-02< / h2 >
2018-03-02 15:09:18 +01:00
< ul >
< li > Export a CSV of the IITA community metadata for Martin Mueller< / li >
< / ul >
< p > < / p >
2018-03-06 09:17:14 +01:00
< h2 id = "2018-03-06" > 2018-03-06< / h2 >
< ul >
< li > Add three new CCAFS project tags to < code > input-forms.xml< / code > (< a href = "https://github.com/ilri/DSpace/pull/357" > #357< / a > )< / li >
< li > Andrea from Macaroni Bros had sent me an email that CCAFS needs them< / li >
2018-03-06 11:25:26 +01:00
< li > Give Udana more feedback on his WLE records from last month< / li >
< li > There were some records using a non-breaking space in their AGROVOC subject field< / li >
< li > I checked and tested some author corrections from Peter from last week, and then applied them on CGSpace< / li >
< / ul >
< pre > < code > $ ./fix-metadata-values.py -i Correct-309-authors-2018-03-06.csv -db dspace -u dspace -p 'fuuu' -f dc.contributor.author -t correct -m 3
$ ./delete-metadata-values.py -i Delete-3-Authors-2018-03-06.csv -db dspace -u dspace-p 'fuuu' -f dc.contributor.author -m 3
< / code > < / pre >
< ul >
< li > This time there were no errors in whitespace but I did have to correct one incorrectly encoded accent character< / li >
2018-03-06 13:45:51 +01:00
< li > Add new CRP subject “ GRAIN LEGUMES AND DRYLAND CEREALS” to < code > input-forms.xml< / code > (< a href = "https://github.com/ilri/DSpace/pull/358" > #358< / a > )< / li >
2018-03-06 20:48:10 +01:00
< li > Merge the ORCID integration stuff in to < code > 5_x-prod< / code > for deployment on CGSpace soon (< a href = "https://github.com/ilri/DSpace/pull/359" > #359< / a > )< / li >
< li > Deploy ORCID changes on CGSpace (linode18), run all system updates, and reboot the server< / li >
< li > Run all system updates on DSpace Test and reboot server< / li >
< li > I ran the < a href = "https://gist.github.com/alanorth/24d8081a5dc25e2a4e27e548e7e2389c" > orcid-authority-to-item.py< / a > script on CGSpace and mapped 2,864 ORCID identifiers from Solr to item metadata< / li >
< / ul >
< pre > < code > $ ./orcid-authority-to-item.py -db dspace -u dspace -p 'fuuu' -s http://localhost:8081/solr -d
< / code > < / pre >
< ul >
< li > I ran the DSpace cleanup script on CGSpace and it threw an error (as always):< / li >
< / ul >
< pre > < code > Error: ERROR: update or delete on table " bitstream" violates foreign key constraint " bundle_primary_bitstream_id_fkey" on table " bundle"
Detail: Key (bitstream_id)=(150659) is still referenced from table " bundle" .
< / code > < / pre >
< ul >
< li > The solution is, as always:
< code >
$ psql dspace -c 'update bundle set primary_bitstream_id=NULL where primary_bitstream_id in (150659);'
UPDATE 1
< / code > < / li >
2018-03-06 09:17:14 +01:00
< / ul >
2018-03-02 15:09:18 +01:00
< / article >
< / div > <!-- /.blog - main -->
< aside class = "col-sm-3 ml-auto blog-sidebar" >
< section class = "sidebar-module" >
< h4 > Recent Posts< / h4 >
< ol class = "list-unstyled" >
< li > < a href = "/cgspace-notes/2018-03/" > March, 2018< / a > < / li >
< li > < a href = "/cgspace-notes/2018-02/" > February, 2018< / a > < / li >
< li > < a href = "/cgspace-notes/2018-01/" > January, 2018< / a > < / li >
< li > < a href = "/cgspace-notes/2017-12/" > December, 2017< / a > < / li >
< li > < a href = "/cgspace-notes/2017-11/" > November, 2017< / a > < / li >
< / ol >
< / section >
< section class = "sidebar-module" >
< h4 > Links< / h4 >
< ol class = "list-unstyled" >
< li > < a href = "https://cgspace.cgiar.org" > CGSpace< / a > < / li >
< li > < a href = "https://dspacetest.cgiar.org" > DSpace Test< / a > < / li >
< li > < a href = "https://github.com/ilri/DSpace" > CGSpace @ GitHub< / a > < / li >
< / ol >
< / section >
< / aside >
< / div > <!-- /.row -->
< / div > <!-- /.container -->
< footer class = "blog-footer" >
< p >
Blog template created by < a href = "https://twitter.com/mdo" > @mdo< / a > , ported to Hugo by < a href = 'https://twitter.com/mralanorth' > @mralanorth< / a > .
< / p >
< p >
< a href = "#" > Back to top< / a >
< / p >
< / footer >
< / body >
< / html >