Commit Graph

55 Commits

Author SHA1 Message Date
f3ab89f7a1
CountryCodeTagger.java: Port to DSpace 6
We need to use the new DSpace 6 service API. Also, the way we read
task properties changes because of the configuration changes.

See: https://wiki.lyrasis.org/display/DSDOC6x/Curation+System
See: https://wiki.lyrasis.org/display/DSDOC6x/Configuration+Reference
2020-08-05 12:28:37 +03:00
5a467f92e0
pom.xml: Bump dependencies for DSpace 6 2020-08-04 15:37:39 +03:00
96e4ed6614
Add .idea
Apparently we should track *some* of .idea?
2020-08-04 15:34:31 +03:00
c1f209ef4f
.gitignore: Add target and others 2020-08-04 15:32:34 +03:00
83602486c0
Use GitHub's JetBrains gitignore
See: https://github.com/github/gitignore/blob/master/Global/JetBrains.gitignore
2020-08-04 15:31:47 +03:00
28238440a4
Remove IntelliJ IDEA stuff 2020-08-04 15:30:47 +03:00
7251b85436
cgspace-countries.json: Remove Palestine
It's the same in the ISO 3166-1 list.
2020-08-04 14:52:36 +03:00
a2616460bf
README.md: Use badge from ILRI repository 2020-08-03 14:47:10 +03:00
26f08e5903
README.md: Update 2020-08-03 14:43:38 +03:00
50a4f68b9d pom.xml: Add bits for deploying to OSSRH
Any time I run `mvn deploy` it will upload a snapshot to OSSRH with
the version "1.0-SNAPSHOT" and some timestamp. I still haven't fig-
ured out how to "promote a release".
2020-08-03 14:32:54 +03:00
03bfacf5d3
README.md: Add TravisCI badge 2020-08-03 14:32:31 +03:00
df4d9b313e
Add TravisCI support 2020-08-03 14:29:17 +03:00
3a6e407765
README.md: Remove TODO about integrating with DSpace
I have now published the code on https://oss.sonatype.org/ via the
Sonatype OSSRH (OSS Repository Hosting) project. Now it is possible
to use it from DSpace's build system by adding it as a dependency
in the dspace/modules/additions/pom.xml.

See: https://issues.sonatype.org/browse/OSSRH-59650
See: https://central.sonatype.org/pages/ossrh-guide.html
2020-08-03 14:20:15 +03:00
af990c2670
README.md: Update mvn note 2020-08-02 23:52:12 +03:00
dcb0532be2
Change groupId to prepare for upload to Central
It's much easier to get your package verified on Central if it uses
a GitHub groupId. Otherwise you need to use DNS verification! This
changes the groupId:

- from: org.cgiar.cgspace.ctask
- to: io.github.ilri.cgspace

Also the package changed as well.

See: https://central.sonatype.org/pages/producers.html
2020-08-02 23:48:13 +03:00
497ce719c2
README.md: Adjust intro text 2020-08-02 23:20:29 +03:00
74caed79fa
pom.xml: Use ILRI GitHub 2020-08-02 23:19:32 +03:00
820e09a08f
pom.xml: Add link to GitHub project 2020-08-02 23:06:50 +03:00
3a805f9bf2
README.md: Add more documentation and notes 2020-08-02 22:55:23 +03:00
ca7deaac8f
CountryCodeTagger.java: Remove unused variable
Some of the other curation tasks use an array of results.
2020-08-02 22:03:10 +03:00
e158e4bc98
CountryCodeTagger.java: Refactor adding of alpha2 codes
We can append the codes we will add to a List of Strings and then
actually apply them later in one addMetadata call, and update the
item with one item.update() call. This reduces identical code and
is more efficient.

Note that when testing this on a collection with thousands of items
I realized that it is really important to limit both the cache size
as well as set the database transaction model to be per object/item
or else you will crash due to Java heap issues. For example:

    $ ~/dspace/bin/dspace curate -t countrycodetagger -i 10568/3 -r - -l 500 -s object

See: https://wiki.lyrasis.org/display/DSPACE/Curation+Task+Cookbook
2020-08-02 18:33:32 +03:00
1c866bdf64
src/main/java: Remove unnecessary comments and prints 2020-08-02 18:32:04 +03:00
28b4707426
README.md: Add TODOs 2020-08-02 15:53:37 +03:00
cc35c45a05
Remove tests
They were automatically generated by Maven and I haven't created
proper ones yet.
2020-08-02 15:52:43 +03:00
e5d45e62be
src/main/java: Refactor CountryCodeTagger.java
Now is much more modular and can easily, cleanly be extended to do
ISO 3166-1 Alpha3, numeric, etc...
2020-08-02 15:51:18 +03:00
a6d3653c9e
README.md: Remove profile todo 2020-08-01 23:39:09 +03:00
6228f337e9
src/main/java: Skip items that have country codes
Originally I wasn't sure if I was going to try to parse each code,
check them against the mapping, and possibly correct them, but it's
easier to just skip items with codes unless we're in "force" mode.
2020-08-01 23:14:19 +03:00
4b553676dd
src/main/java: Implement task "profiles"
The DSpace curation system has task properties that can be used to
create "profiles" of sorts. For example, if you set a custom task
name in curate.cfg:

    plugin.named.org.dspace.curate.CurationTask = \
        org.cgiar.cgspace.ctasks.CountryCodeTagger = countrycodetagger \
        org.cgiar.cgspace.ctasks.CountryCodeTagger = countrycodetagger.force

... then DSpace will look for countrycodetagger.cfg by default, and
countrycodetagger.force.cfg for the second task. We can set different
properties in each one, for example "force=true", and then operate
accordingly in the task when we check the value using taskProperty().

I will use this to force all country tags to be cleared and updated,
where by default we only tag if there are no existing country tags.

See: https://wiki.lyrasis.org/display/DSDOC5x/Curation+System
2020-08-01 23:04:35 +03:00
d4cd5bfd61
src/main/java: Optimize imports 2020-08-01 23:03:51 +03:00
4c5eb9c1e7
README.md: Add TODO about workflow 2020-08-01 21:56:36 +03:00
9f68834f87
README.md: Add new TODOs 2020-08-01 21:34:02 +03:00
cf73935ea9
src/main/java: Use tokenized alpha2 field parts 2020-08-01 21:02:58 +03:00
409eb3bd02
src/main/java: Refactor vocabularies classes
We can't use the same class to map ISO 3166-1 and CGSpace country
vocabularies because our Gson is old and lacks the support for the
"alternate" value in its annotations (added in Gson 2.5). So it's
better to create multiple classes that extend the base one instead
of creating a custom deserializer. Each extended class then uses
its own Serializedname.
2020-08-01 20:53:59 +03:00
6891c93eeb
README.md: Add TODO about Gson for DSpace 6 2020-08-01 20:50:11 +03:00
98d3d56d78
src/main/java: Fix comment 2020-08-01 20:31:31 +03:00
c2c5baaf7a
Use gson 2.2.1
That's the same version that DSpace 5.8 is using so we should use
it here as well so we don't forget. Unfortunately this means that
we can't use the ability to use alternate serializednames. We will
need to create different classes to map to our different JSON files
instead of simply matching different elements on the fly.
2020-08-01 20:21:25 +03:00
fdcd1811a2
src/main/resources: Adjust CGSpace country list
Based on Peter's preferred display values for these countries. We
will still use their ISO 3166-1 country codes so we include their
appropriate data from the iso-codes iso_3166-1.json list.
2020-08-01 11:50:55 +03:00
4a6edba467
src/main/java: Add cgspace_name to Countries class
We will eventually use this to read CGSpace-specific mappings to
ISO 3166-1 values.
2020-08-01 11:49:22 +03:00
b3a993d5bd
src/main/java: Fix comment alignment 2020-08-01 11:46:13 +03:00
0f2081db51
src/main/java: Correctly map common_name and official_name
I forgot to fix these so that they map exactly to the ISO 3166-1
JSON so that GSON can deserialize them automatically.
2020-08-01 11:44:54 +03:00
91a4367f38
src/main/java: Add comment 2020-08-01 11:01:27 +03:00
8c23277382
src/main/resources: Start collecting CGSpace countries
I will use the same format as the ISO 3166-1 JSON to make parsing
easier. I will add a new "cgspace_name" key to indicate our custom
name, though the codes will map to the standard ISO 3166-1 codes.
2020-08-01 09:31:26 +03:00
6477b923b6
Add working tagging of ISO 3166-1 countries
If an item has country metadata (cg.coverage.country) and no alpha
codes we check for name matches in ISO 3166 and add alpha_2 codes.
The name matching checks for a case-insensitive match on either an
ISO 3166-1 name, official name, or common name.
2020-08-01 00:05:21 +03:00
6995d7a864
Match alpha_2 and alpha_3 JSON elements with class
For GSON to automatically map these to our class we need to make
sure they use the same name.
2020-08-01 00:02:27 +03:00
edd08c859a
CountryCodeTagger.java: Remove FileReader import
We are using an InputStream now.
2020-07-31 23:37:06 +03:00
94ceabb732
Close BufferedReader after we use it 2020-07-31 22:26:50 +03:00
9089ffb66f
Add TODO about using try-with-resource
This would automatically close the BufferedReader after we are done
with it, but it also means that the JSON object we create is lost
when we exit the try() scope...

See: https://docs.oracle.com/javase/tutorial/essential/exceptions/tryResourceClose.html
2020-07-31 22:26:33 +03:00
af708933b2
Use BufferedReader for iso-codes JSON 2020-07-31 22:25:09 +03:00
bb9e53b220
README.md: Add note about iso-codes license
Debian's iso-codes project uses the LGPL v2.1 license.

See: https://salsa.debian.org/iso-codes-team/iso-codes/-/blob/main/COPYING
2020-07-31 22:23:35 +03:00
d11bd00fa9
Use country vocabs from package resources
Import a local copy of iso_3166-1.json from iso-codes version 4.5.0
so we don't need to load it from the system.

See: https://salsa.debian.org/iso-codes-team/iso-codes
2020-07-31 22:18:32 +03:00