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115 lines
5.4 KiB
Markdown
115 lines
5.4 KiB
Markdown
+++
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date = "2016-09-01T15:53:00+03:00"
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author = "Alan Orth"
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title = "September, 2016"
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tags = ["notes"]
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image = "../images/bg.jpg"
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+++
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## 2016-09-01
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- Discuss helping CCAFS with some batch tagging of ORCID IDs for their authors
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- Discuss how the migration of CGIAR's Active Directory to a flat structure will break our LDAP groups in DSpace
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- We had been using `DC=ILRI` to determine whether a user was ILRI or not
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- It looks like we might be able to use OUs now, instead of DCs:
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```
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$ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b "dc=cgiarad,dc=org" -D "admigration1@cgiarad.org" -W "(sAMAccountName=admigration1)"
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```
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- User who has been migrated to the root vs user still in the hierarchical structure:
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```
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distinguishedName: CN=Last\, First (ILRI),OU=ILRI Kenya Employees,OU=ILRI Kenya,OU=ILRIHUB,DC=CGIARAD,DC=ORG
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distinguishedName: CN=Last\, First (ILRI),OU=ILRI Ethiopia Employees,OU=ILRI Ethiopia,DC=ILRI,DC=CGIARAD,DC=ORG
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```
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- Changing the DSpace LDAP config to use `OU=ILRIHUB` seems to work:
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- Notes for local PostgreSQL database recreation from production snapshot:
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```
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$ dropdb dspacetest
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$ createdb -O dspacetest --encoding=UNICODE dspacetest
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$ psql dspacetest -c 'alter user dspacetest createuser;'
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$ pg_restore -O -U dspacetest -d dspacetest ~/Downloads/cgspace_2016-09-01.backup
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$ psql dspacetest -c 'alter user dspacetest nocreateuser;'
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$ psql -U dspacetest -f ~/src/git/DSpace/dspace/etc/postgres/update-sequences.sql dspacetest -h localhost
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$ vacuumdb dspacetest
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```
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- Some names that I thought I fixed in July seem not to be:
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```
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dspacetest=# select distinct text_value, authority, confidence from metadatavalue where metadata_field_id=3 and resource_type_id=2 and text_value like 'Poole, %';
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text_value | authority | confidence
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-----------------------+--------------------------------------+------------
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Poole, Elizabeth Jane | b6efa27f-8829-4b92-80fe-bc63e03e3ccb | 600
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Poole, Elizabeth Jane | 41628f42-fc38-4b38-b473-93aec9196326 | 600
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Poole, Elizabeth Jane | 83b82da0-f652-4ebc-babc-591af1697919 | 600
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Poole, Elizabeth Jane | c3a22456-8d6a-41f9-bba0-de51ef564d45 | 600
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Poole, E.J. | c3a22456-8d6a-41f9-bba0-de51ef564d45 | 600
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Poole, E.J. | 0fbd91b9-1b71-4504-8828-e26885bf8b84 | 600
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(6 rows)
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```
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- At least a few of these actually have the correct ORCID, but I will unify the authority to be c3a22456-8d6a-41f9-bba0-de51ef564d45
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```
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dspacetest=# update metadatavalue set authority='c3a22456-8d6a-41f9-bba0-de51ef564d45', confidence=600 where metadata_field_id=3 and resource_type_id=2 and text_value like 'Poole, %';
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UPDATE 69
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```
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- And for Peter Ballantyne:
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```
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dspacetest=# select distinct text_value, authority, confidence from metadatavalue where metadata_field_id=3 and resource_type_id=2 and text_value like 'Ballantyne, %';
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text_value | authority | confidence
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-------------------+--------------------------------------+------------
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Ballantyne, Peter | 2dcbcc7b-47b0-4fd7-bef9-39d554494081 | 600
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Ballantyne, Peter | 4f04ca06-9a76-4206-bd9c-917ca75d278e | 600
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Ballantyne, P.G. | 4f04ca06-9a76-4206-bd9c-917ca75d278e | 600
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Ballantyne, Peter | ba5f205b-b78b-43e5-8e80-0c9a1e1ad2ca | 600
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Ballantyne, Peter | 20f21160-414c-4ecf-89ca-5f2cb64e75c1 | 600
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(5 rows)
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```
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- Again, a few have the correct ORCID, but there should only be one authority...
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```
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dspacetest=# update metadatavalue set authority='4f04ca06-9a76-4206-bd9c-917ca75d278e', confidence=600 where metadata_field_id=3 and resource_type_id=2 and text_value like 'Ballantyne, %';
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UPDATE 58
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```
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- And for me:
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```
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dspacetest=# select distinct text_value, authority, confidence from metadatavalue where metadata_field_id=3 and resource_type_id=2 and text_value like 'Orth, A%';
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text_value | authority | confidence
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------------+--------------------------------------+------------
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Orth, Alan | 4884def0-4d7e-4256-9dd4-018cd60a5871 | 600
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Orth, A. | 4884def0-4d7e-4256-9dd4-018cd60a5871 | 600
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Orth, A. | 1a1943a0-3f87-402f-9afe-e52fb46a513e | 600
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(3 rows)
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dspacetest=# update metadatavalue set authority='1a1943a0-3f87-402f-9afe-e52fb46a513e', confidence=600 where metadata_field_id=3 and resource_type_id=2 and text_value like 'Orth, %';
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UPDATE 11
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```
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- And for CCAFS author Bruce Campbell that I had discussed with CCAFS earlier this week:
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```
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dspacetest=# update metadatavalue set authority='0e414b4c-4671-4a23-b570-6077aca647d8', confidence=600 where metadata_field_id=3 and resource_type_id=2 and text_value like 'Campbell, B%';
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UPDATE 166
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dspacetest=# select distinct text_value, authority, confidence from metadatavalue where metadata_field_id=3 and resource_type_id=2 and text_value like 'Campbell, B%';
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text_value | authority | confidence
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------------------------+--------------------------------------+------------
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Campbell, Bruce | 0e414b4c-4671-4a23-b570-6077aca647d8 | 600
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Campbell, Bruce Morgan | 0e414b4c-4671-4a23-b570-6077aca647d8 | 600
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Campbell, B. | 0e414b4c-4671-4a23-b570-6077aca647d8 | 600
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Campbell, B.M. | 0e414b4c-4671-4a23-b570-6077aca647d8 | 600
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(4 rows)
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```
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- After updating the Authority indexes (`bin/dspace index-authority`) everything looks good
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