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424 lines
26 KiB
Markdown
424 lines
26 KiB
Markdown
---
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title: "February, 2023"
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date: 2023-02-01T10:57:36+03:00
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author: "Alan Orth"
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categories: ["Notes"]
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---
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## 2023-02-01
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- Export CGSpace to cross check the DOI metadata with Crossref
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- I want to try to expand my use of their data to journals, publishers, volumes, issues, etc...
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<!--more-->
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- First, extract a list of DOIs for use with `crossref-doi-lookup.py`:
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```console
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$ csvcut -c 'cg.identifier.doi[en_US]' ~/Downloads/2023-02-01-cgspace.csv \
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| csvgrep -c 1 -m 'doi.org' \
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| csvgrep -c 1 -m ' ' -i \
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| csvgrep -c 1 -r '.*cifor.*' -i \
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| sed 1d > /tmp/2023-02-01-dois.txt
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$ ./ilri/crossref-doi-lookup.py -e a.orth@cgiar.org -i /tmp/2023-02-01-dois.txt -o ~/Downloads/2023-01-31-crossref-results.csv -d
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```
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- Then extract the ID, DOI, journal, volume, issue, publisher, etc from the CGSpace dump and rename the `cg.identifier.doi[en_US]` to `doi` so we can join on it with the Crossref results file:
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```console
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$ csvcut -c 'id,cg.identifier.doi[en_US],cg.journal[en_US],cg.volume[en_US],cg.issue[en_US],dcterms.publisher[en_US],cg.number[en_US],dcterms.license[en_US]' ~/Downloads/2023-02-01-cgspace.csv \
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| csvgrep -c 'cg.identifier.doi[en_US]' -r '.*cifor.*' -i \
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| sed -e '1s/cg.identifier.doi\[en_US\]/doi/' \
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-e 's_https://doi.org/__g' \
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-e 's_https://dx.doi.org/__g' \
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> /tmp/2023-02-01-cgspace-doi-metadata.csv
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$ csvjoin -c doi /tmp/2023-02-01-cgspace-doi-metadata.csv ~/Downloads/2023-02-01-crossref-results.csv > /tmp/2023-02-01-cgspace-crossref-check.csv
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```
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- And import into OpenRefine for analysis and cleaning
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- I just noticed that Crossref also has types, so we could use that in the future too!
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- I got a few corrections after examining manually, but I didn't manage to identify any patterns that I could use to do any automatic matching or cleaning
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## 2023-02-05
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- Normalize text lang attributes in PostgreSQL, run a quick Discovery index, and then export CGSpace to check Initiative mappings and countries/regions
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- Run all system updates on CGSpace (linode18) and reboot it
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## 2023-02-06
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- Peter said that a new Initiative was approved last month so we need to add it to CGSpace: `Fragility, Conflict, and Migration`
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- There is lots of discussion about the "issue date" versus "available date" with Enrico and IFPRI, after lots of feedback from the PRMS QA
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- I filed [an issue on CG Core to propose using `dcterms.available` as an optional field to indicate the online date](https://github.com/AgriculturalSemantics/cg-core/issues/43)
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## 2023-02-07
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- IFPRI's web developer Tony managed to get his Drupal harvester to have a useful user agent:
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```console
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54.x.x.x - - [06/Feb/2023:10:10:32 +0100] "POST /rest/items/find-by-metadata-field?limit=%22100&offset=0 HTTP/1.1" 200 58855 "-" "IFPRI drupal POST harvester"
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```
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- He also noticed that there is no pagination on POST requests to `/rest/items/find-by-metadata-field`, and that he needs to increase his timeout for requests that return 100+ results, ie:
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```console
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curl -f -H "Content-Type: application/json" -X POST "https://dspacetest.cgiar.org/rest/items/find-by-metadata-field" -d '{"key":"cg.subject.actionArea", "value":"Systems Transformation", "language": "en_US"}'
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```
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- I need to ask on the DSpace Slack about this POST pagination
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- Abenet and Udana noticed that the Handle server was not running
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- Looking in the `error.log` file I see that the service is complaining about a lock file being present
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- This is because Linode had to do emergency maintenance on the VM host this morning and the Handle server didn't shut down properly
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- I'm having an issue with `poetry update` so I spent some time debugging and filed [an issue](https://github.com/python-poetry/poetry/issues/7482)
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- Proof and import nine items for the Digital Innovation Inititive for IFPRI
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- There were only some minor issues in the metadata
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- I also did a duplicate check with `check-duplicates.py` just in case
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- I did some minor updates on csv-metadata-quality
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- First, to reduce warnings on non-SPDX licenses like "Copyrighted; all rights reserved" and "Other" since they are very common for us and I'm sick of seeing the warnings
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- Second, to skip whitespace and newline fixes on the abstract field since so many times they are intended
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## 2023-02-08
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- Make some edits to IFPRI records requested by Jawoo and Leigh
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- Help Alessandra upload a last minute report for SAPLING
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- Proof and upload twenty-seven IFPRI records to CGSpace
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- It's a good thing I did a duplicate check because I found three duplicates!
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- Export CGSpace to update Initiative mappings and country/region mappings
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- Then start a harvest on AReS
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## 2023-02-09
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- Do some minor work on the CSS on the DSpace 7 test
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## 2023-02-10
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- I noticed a large number of PostgreSQL locks from dspaceWeb on CGSpace:
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```console
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$ psql -c 'SELECT * FROM pg_locks pl LEFT JOIN pg_stat_activity psa ON pl.pid = psa.pid;' | grep -o -E '(dspaceWeb|dspaceApi|dspaceCli)' | sort | uniq -c
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2033 dspaceWeb
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```
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- Looking at the lock age, I see some already 1 day old, including this curious query:
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```console
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select nextval ('public.registrationdata_seq')
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```
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- I killed all locks that were more than a few hours old
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- Export CGSpace to update Initiative collection mappings
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- Discuss adding `dcterms.available` to the submission form
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- I also looked in the `dcterms.description` field on CGSpace and found ~1,500 items where the is an indication of an online published date
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- Using some facets in OpenRefine I narrowed down the ones mentioning "online" and then extracted the dates to a new column:
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```console
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cells['dcterms.description[en_US]'].value.replace(/.*?(\d+{2}) ([a-zA-Z]+) (\d+{2}).*/,"$3-$2-$1")
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```
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- Then to handle formats like "2022-April-26" and "2021-Nov-11" I used some replacement GRELs (note the order so we don't replace short patterns in longer strings prematurely):
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```console
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value.replace("January","01").replace("February","02").replace("March","03").replace("April","04").replace("May","05").replace("June","06").replace("July","07").replace("August","08").replace("September","09").replace("October","10").replace("November","11").replace("December","12")
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value.replace("Jan","01").replace("Feb","02").replace("Mar","03").replace("Apr","04").replace("May","05").replace("Jun","06").replace("Jul","07").replace("Aug","08").replace("Sep","09").replace("Oct","10").replace("Nov","11").replace("Dec","12")
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```
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- This covered about 1,300 items, then I did about 100 more messier ones with some more regex wranling
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- I removed the `dcterms.description[en_US]` field from items where I updated the dates
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- Then I added `dcterms.available` to the submission form and the item view
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- We need to announce this to the editors
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## 2023-02-13
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- Export CGSpace to do some metadata quality checks
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- I added CGIAR Trust Fund as a donor to some new Initiative outputs
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- I moved some abstracts from the description field
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- I moved some version information to the `cg.edition` field
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## 2023-02-14
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- The PRMS team in Colombia sent some questions about countries on CGSpace
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- I had to fix some, that were clearly wrong, but there is also a difference between CGSpace and MEL because we use mostly iso-codes, and MEL uses the UN M.49 list
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- Then I re-ran the country code tagger from cgspace-java-helpers, forcing the update on all items in the Initiatives community
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- Remove Alliance research levers from `cg.contributor.crp` field after discussing with Daniel and Maria
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- This was a mistake on TIP's part, and there is no direct mapping between research levers and CRPs
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- I exported CGSpace to check Initiative collection mappings, regions, and licenses
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- Peter told me that all CGIAR blog posts for the Initiatives should be CC-BY-4.0, and I see the logo at the bottom in light gray!
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- I had previously missed that and removed some licenses for blog posts
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- I checked cgiar.org, ifpri.org, icarda.org, iwmi.cgiar.org, irri.org, etc and corrected a handful
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- Start a harvest on AReS
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## 2023-02-15
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- Work on rebasing my local DSpace 7 dev branches on top of the latest 7.5-SNAPSHOT
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- It seems the issues I had with the `dspace submission-forms-migrate` tool in [August, 2022]({{< relref "2022-08.md" >}}) were fixed
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- I imported a fresh PostgreSQL snapshot from CGSpace and then removed the Atmire migrations and ran the new migrations as I originally noted in [March, 2022]({{< relref "2022-03.md" >}}), and is pointed out in the [DSpace 7 upgrade notes](https://wiki.lyrasis.org/display/DSDOC7x/Upgrading+DSpace)
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- Now I get a new error:
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```console
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localhost/dspace7= ☘ DELETE FROM schema_version WHERE version IN ('5.0.2017.09.25', '6.0.2017.01.30', '6.0.2017.09.25');
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localhost/dspace7= ☘ DELETE FROM schema_version WHERE description LIKE '%Atmire%' OR description LIKE '%CUA%' OR description LIKE '%cua%';
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localhost/dspace7= \q
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$ ./bin/dspace database migrate ignored
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...
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CREATE INDEX resourcepolicy_action_idx ON resourcepolicy(action_id)
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at org.flywaydb.core.internal.sqlscript.DefaultSqlScriptExecutor.handleException(DefaultSqlScriptExecutor.java:275)
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at org.flywaydb.core.internal.sqlscript.DefaultSqlScriptExecutor.executeStatement(DefaultSqlScriptExecutor.java:222)
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at org.flywaydb.core.internal.sqlscript.DefaultSqlScriptExecutor.execute(DefaultSqlScriptExecutor.java:126)
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at org.flywaydb.core.internal.resolver.sql.SqlMigrationExecutor.executeOnce(SqlMigrationExecutor.java:69)
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at org.flywaydb.core.internal.resolver.sql.SqlMigrationExecutor.lambda$execute$0(SqlMigrationExecutor.java:58)
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at org.flywaydb.core.internal.database.DefaultExecutionStrategy.execute(DefaultExecutionStrategy.java:27)
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at org.flywaydb.core.internal.resolver.sql.SqlMigrationExecutor.execute(SqlMigrationExecutor.java:57)
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at org.flywaydb.core.internal.command.DbMigrate.doMigrateGroup(DbMigrate.java:377)
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... 24 more
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Caused by: org.postgresql.util.PSQLException: ERROR: relation "resourcepolicy_action_idx" already exists
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at org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse(QueryExecutorImpl.java:2676)
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at org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImpl.java:2366)
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at org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:356)
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at org.postgresql.jdbc.PgStatement.executeInternal(PgStatement.java:496)
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at org.postgresql.jdbc.PgStatement.execute(PgStatement.java:413)
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at org.postgresql.jdbc.PgStatement.executeWithFlags(PgStatement.java:333)
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at org.postgresql.jdbc.PgStatement.executeCachedSql(PgStatement.java:319)
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at org.postgresql.jdbc.PgStatement.executeWithFlags(PgStatement.java:295)
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at org.postgresql.jdbc.PgStatement.execute(PgStatement.java:290)
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at org.apache.commons.dbcp2.DelegatingStatement.execute(DelegatingStatement.java:193)
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at org.apache.commons.dbcp2.DelegatingStatement.execute(DelegatingStatement.java:193)
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at org.flywaydb.core.internal.jdbc.JdbcTemplate.executeStatement(JdbcTemplate.java:201)
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at org.flywaydb.core.internal.sqlscript.ParsedSqlStatement.execute(ParsedSqlStatement.java:95)
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at org.flywaydb.core.internal.sqlscript.DefaultSqlScriptExecutor.executeStatement(DefaultSqlScriptExecutor.java:210)
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... 30 more
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```
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- I dropped that index and then the migration succeeded:
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```console
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localhost/dspace7= ☘ DROP INDEX resourcepolicy_action_idx;
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localhost/dspace7= ☘ \q
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$ ./bin/dspace database migrate ignored
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Done.
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```
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- I think that particular error is because I applied the [indexes in this unmerged DSpace 6 patch](https://github.com/DSpace/DSpace/pull/1792), so I don't need to report this as an error in DSpace 7
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## 2023-02-16
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- I found a suspicious number of PostgreSQL locks on CGSpace and decided to investigate:
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```console
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$ psql -c 'SELECT * FROM pg_locks pl LEFT JOIN pg_stat_activity psa ON pl.pid = psa.pid;' | grep -o -E '(dspaceWeb|dspaceApi|dspaceCli)' | sort | uniq -c
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44 dspaceApi
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372 dspaceCli
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446 dspaceWeb
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```
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- This started happening yesterday and I killed a few locks that were several hours old after inspecting the `locks-age.sql` output
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- I also checked the `locks.sql` output, which helpfully lists the blocked PID and the blocking PID, to find one blocking PID that was idle in transaction
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- I killed that process and then all other locks were instantly processed
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- I filed [a GitHub issue](https://github.com/DSpace/dspace-angular/issues/2103) on dspace-angular requesting the item view to use the bitstream description instead of the file name if present
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- Weekly CG Core types meeting
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- I need to go through the actions and remove those items that are only for CGSpace internal use, ie:
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- CD-ROM
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- Manuscript-unpublished
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- Photo Report
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- Questionnaire
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- Wiki
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- Weekly CGIAR Repository Working Group meeting
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- I did some experiments with Crossref dates for about 20,000 DOIs in CGSpace using my `crossref-doi-lookup.py` script
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- Some things I noted from reading the [Crossref API docs](https://github.com/CrossRef/rest-api-doc/blob/master/api_format.md) and inspecting the records for a few dozen DOIs manually:
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- `["created"]["date-parts"]` → Date on which the DOI was first registered (not useful for us)
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- `["published-print"]["date-parts"]` → Date on which the work was published in print
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- `["journal-issue"]["published-print"]["date-parts"]` → When present, is 99% the same as the above
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- `["published-online"]["date-parts"]` → Date on which the work was published online
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- `["journal-issue"]["published-online"]["date-parts"]` → Much more rare, and only 50% the same as the above, so unreliable
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- `["issued"]["date-parts"]` → Earliest of published-print and published-online (not useful to us)
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- After checking the DOIs manully I decided that when the `published-print` date exists, it is usually more accurate than our issued dates
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- I set 12,300 issue dates to those from Crossref
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- I also decided that, when `published-online` exists, it is usually accurate when I check the publisher page (we don't have many online dates to compare)
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- I set the available date for ~7,000 items to the published-online date as long as:
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- There was no `dcterms.available` date already
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- It was different than the issued date, because for now I only want online dates that are different, in case this is an online only journal in which case that can be the issue date... maybe I'll re-visit that later
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## 2023-02-17
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- It seems some (all?) of the changes I applied to dates last night didn't get saved...
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- I don't know what happened, so I will run them again after some investigation
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- I submitted the first batch of ~7,600 changes and it took twelve hours!
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- I almost cancelled it because after applying the changes there was a lock blocking everything for two hours, and it seemed to be stuck, but I kept checking it and saw that the `query_start` and `state_change` were being updated despite it being state "idle in transaction":
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```console
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$ psql -c 'SELECT * FROM pg_stat_activity WHERE pid=1025176' | less -S
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```
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- I will apply the other changes in smaller batches...
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- Lately I've noticed a lot of activity from the country code tagger curation task
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- Looking in the logs I see items being tagged that are very old and should have already been tagged years ago
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- Also, I see a ton of these errors whenever the task is updating an item:
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```console
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2023-02-17 08:01:00,252 INFO org.dspace.curate.Curator @ Curation task: countrycodetagger performed on: 10568/89020 with status: 0. Result: '10568/89020: added 1 alpha2 country code(s)'
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2023-02-17 08:01:00,467 ERROR com.atmire.versioning.ModificationLogger @ Error while writing item to versioning index: a0fe9d9a-6ac1-4b6a-8fcb-dae07a6bbf58 message:missing required field: epersonID
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org.apache.solr.client.solrj.impl.HttpSolrServer$RemoteSolrException: missing required field: epersonID
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at org.apache.solr.client.solrj.impl.HttpSolrServer.executeMethod(HttpSolrServer.java:552)
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at org.apache.solr.client.solrj.impl.HttpSolrServer.request(HttpSolrServer.java:210)
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at org.apache.solr.client.solrj.impl.HttpSolrServer.request(HttpSolrServer.java:206)
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at org.apache.solr.client.solrj.request.AbstractUpdateRequest.process(AbstractUpdateRequest.java:124)
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at org.apache.solr.client.solrj.SolrServer.add(SolrServer.java:116)
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at org.apache.solr.client.solrj.SolrServer.add(SolrServer.java:102)
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at com.atmire.versioning.ModificationLogger.indexItem(ModificationLogger.java:263)
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at com.atmire.versioning.ModificationConsumer.end(ModificationConsumer.java:134)
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at org.dspace.event.BasicDispatcher.dispatch(BasicDispatcher.java:157)
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at org.dspace.core.Context.dispatchEvents(Context.java:455)
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at org.dspace.curate.Curator.visit(Curator.java:541)
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at org.dspace.curate.Curator$TaskRunner.run(Curator.java:568)
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at org.dspace.curate.Curator.doCollection(Curator.java:515)
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at org.dspace.curate.Curator.doCommunity(Curator.java:487)
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at org.dspace.curate.Curator.doSite(Curator.java:451)
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at org.dspace.curate.Curator.curate(Curator.java:269)
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at org.dspace.curate.Curator.curate(Curator.java:203)
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at org.dspace.curate.CurationCli.main(CurationCli.java:220)
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at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
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at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
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at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
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at java.lang.reflect.Method.invoke(Method.java:498)
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at org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.java:229)
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at org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:81)
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```
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- This must be related...
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## 2023-02-18
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- I realized why the country-code-tagger was tagging everything: I had overridden the `force` parameter last week!
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- Start a harvest on AReS
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## 2023-02-20
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- IWMI is concerned that some of their items with top Altmetric attention scores don't show up in the AReS Explorer
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- I looked into it for one and found that AReS is using the Handle, but Altmetric hasn't associated the Handle with the DOI
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- Looking into country and region issues for the PRMS team
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- Last week they had some questions about some invalid countries that ended up being typos
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- I realized my cgspace-java-helpers country-code-tagger curation task is not using the latest version, so it was missing Türkiye
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- I compiled the new version and ran it manually, but I have to upload a new version to Maven Central and then update the dependency in `dspace/modules/additions/pom.xml` ughhhhhh
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- I tagged version 6.2 with the change for Türkiye and uploaded to to Maven Central with `mvn clean deploy`
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- I'm having second thoughts about switching to UN M.49 for countries because there are just too many tradeoffs
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- I want to find a way to keep our existing list, and codify some rules for it
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- There are several discussions related to the shortcomings of ISO themselves and the iso-codes project, for example:
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- [Inconsistency with articles in ISO-3166-1 English short names](https://salsa.debian.org/iso-codes-team/iso-codes/-/issues/33) (this one was filed by me two years ago!)
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- [ISO 3166-1: What's the policy for `common_name`?](https://salsa.debian.org/iso-codes-team/iso-codes/-/issues/44)
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- I almost want to say fuck it, let's just use iso-codes and tell everyone to deal with it, but make sure we handle ISO 3166-1 Alpha2 or probably Alpha3 in the future
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- Something like:
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- Prefer `common_name` if it exists
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- Prefer the shorter of `name` and `official name`
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## 2023-02-21
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- Continue working on my `parse-iso-codes.py` script to parse the iso-codes JSON for ISO 3166-1
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- I also started a spreadsheet to track current CGSpace country names, proposed new names using the compromise above, and UN M.49 names
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- I proposed this to Peter but he wasn't happy because there are still some stupidly long and political names there
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- I bumped the version of cgspace-java-helpers to 6.2-SNAPSHOT and pushed it to Maven Central because I can't figure out how to get non-snapshot releases to go there
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- Ouch, grunt 1.6.0 was released a few weeks ago, which relies on Node.js v16, thus breaking the Mirage 2 build in DSpace 6
|
||
- I filed [an issue in DSpace](https://github.com/DSpace/DSpace/issues/8676)
|
||
- Help Moises from CIP troubleshoot harvesting issues on their WordPress site
|
||
- I see 2,000 requests with the user agent "RTB website BOT" today and they are all HTTP 200
|
||
|
||
```console
|
||
# grep 'RTB website BOT' /var/log/nginx/rest.log | awk '{print $9}' | sort | uniq -c | sort -h
|
||
2023 200
|
||
```
|
||
|
||
- Start reviewing and fixing metadata for Sam's ~250 CAS publications from last year
|
||
- Both Abenet and Peter have already looked at them and Sam has been waiting for months on this
|
||
|
||
## 2023-02-22
|
||
|
||
- Continue proofing CAS records for Sam
|
||
- I downloaded all the PDFs manually and checked the issue dates for each from the PDF, noting some that had licenses, ISBNs, etc
|
||
- I combined the title, abstract, and system subjects into one column to mine them for AGROVOC terms:
|
||
|
||
```console
|
||
toLowercase(value) + toLowercase(cells["dcterms.abstract"].value) + toLowercase(cells["cg.subject.system"].value.replace("||", " "))
|
||
```
|
||
|
||
- Then I extracted a list of AGROVOC terms the same way I did in [August, 2022]({{< relref "2022-08.md" >}}) and used this Jython code to extract matching terms:
|
||
|
||
```python
|
||
import re
|
||
|
||
with open(r"/tmp/agrovoc-subjects.txt",'r') as f :
|
||
terms = [name.rstrip().lower() for name in f]
|
||
|
||
return "||".join([term for term in terms if re.match(r".*\b" + term + r"\b.*", value.lower())])
|
||
```
|
||
|
||
- Then I used [this cool Jython to remove duplicate metadata values](https://stackoverflow.com/questions/15419080/openrefine-remove-duplicates-from-list-with-jython):
|
||
|
||
```python
|
||
deduped_list = list(set(value.split("||")))
|
||
return '||'.join(map(str, deduped_list))
|
||
```
|
||
|
||
- Then I did the same with countries, woooooo!
|
||
- I checked for duplicates and found forty-one
|
||
- I just stumbled upon UNTERM, which provides the official list of countries for the UN General Assembly, including a downloadable Excel with the short and formal names in all UN languages: https://unterm.un.org/unterm2/en/country
|
||
- I created a [pull request to add common names for Iran, Laos, and Syria on the Debian iso-codes package](https://salsa.debian.org/iso-codes-team/iso-codes/-/merge_requests/32)
|
||
- These are remarked upon in the ISO.org online browsing platform for ISO 3166-1
|
||
|
||
## 2023-02-23
|
||
|
||
- Tag v0.6.1 of csv-metadata-quality
|
||
- Weekly meeting about CG Core types
|
||
- I need to get some definitions from Peter for some types
|
||
- Peter sent some of the feedback from Indira to XMLUI
|
||
- I removed some old facets, limited others to less values, and adjusted the recent submissions from 5 to 10
|
||
|
||
## 2023-02-24
|
||
|
||
- More work on understanding Sam's CAS publications to prepare for uploading them to CGSpace
|
||
- I need to reconcile the duplicates and Peter's type re-classifications in the final version of the spreadsheet
|
||
- I flagged all the duplicates by creating a custom text facet matching all their titles like:
|
||
|
||
```console
|
||
or(
|
||
isNotNull(value.match("Evaluation of the CGIAR Research Program on Climate Change, Agriculture and Food Security (CCAFS)")),
|
||
isNotNull(value.match("Report of the IEA Workshop on Development, Use and Assessment of TOC in CGIAR Research, Rome, 12-13 January 2017")),
|
||
isNotNull(value.match("Report of the IEA Workshop on Evaluating the Quality of Science, Rome, 10-11 December 2015")),
|
||
isNotNull(value.match("Review of CGIAR’s Intellectual Assets Principles")),
|
||
...
|
||
)
|
||
```
|
||
|
||
- Annoyingly this seems to miss the ones with parenthesis so I had to do those manually
|
||
- This matched thirty-seven items, then I flagged them so I can handle them separately after uploading the others
|
||
- Then I used the URL field in the old version of the file to match the items with types `Evaluation` and `Independent Commentary` since Peter changed them
|
||
- I added extent, volume, issue, number, and affiliation to a few journal articles
|
||
- Then I did some last minute checks to make sure we're not uploading files for items marked as having "multiple documents"
|
||
|
||
## 2023-02-25
|
||
|
||
- Oh nice, my [pull request adding common names for Iran, Laos, and Syria to iso-codes](https://salsa.debian.org/iso-codes-team/iso-codes/-/merge_requests/32) was merged
|
||
- I did a test import of the 198 CAS Publications on DSpace Test, then inspected Abenet's file with Gaia's "multiple documents" field one more time and decided to do the import on CGSpace
|
||
- Gaia's "multiple documents" column had some text like "E6" and "F7" that didn't make any sense, and those files were not in the Sharepoint even
|
||
|
||
## 2023-02-26
|
||
|
||
- Start a harvest on AReS
|
||
|
||
## 2023-02-27
|
||
|
||
- I found two items for the CAS Publications that were marked as a duplicates, but upon second inspection were not, so I uploaded it to CGSpace
|
||
- That makes the total number of items for CAS 200...
|
||
- I did some CSV joining and inspections with the remaining thirty-six duplicates with the metadata for their existing items on CGSpace and uploaded them
|
||
- Do some work on the new DSpace 7 submission forms
|
||
- I ended up reverting to the stock configuration to use some new techniques like the style and type bind
|
||
|
||
## 2023-02-28
|
||
|
||
- Keep working on the DSpace 7 submission forms
|
||
- As part of this I asked Maria and Francesca if they are still using the `cg.link.permalink` (Bioversity publications permalink) and they said no, so we can remove it from the submission form
|
||
- I also removed `cg.subject.ccafs` since the CRP ended over a year ago and `cg.subject.pabra` since there have only been a handful of new items in [their collection](https://hdl.handle.net/10568/80211) and they seem to be using Alliance subjects instead
|
||
- I filed [a bug](https://github.com/DSpace/DSpace/issues/8686) on DSpace regarding the inability to add freetext values from an input field that uses a vocabulary
|
||
|
||
<!-- vim: set sw=2 ts=2: -->
|