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Update notes for 2018-04-04

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Alan Orth 2018-04-04 17:01:08 +03:00
parent dcea6057db
commit f45ab64261
Signed by: alanorth
GPG Key ID: 0FB860CC9C45B1B9
5 changed files with 77 additions and 28 deletions
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22
content/posts/2018-04.md
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@ -41,6 +41,10 @@ Fixed 1 occurences of: AGRICULTURE FOR NUTRITION AND HEALTH
```
$ export JAVA_OPTS='-Dfile.encoding=UTF-8 -Xmx1024m'
$ time schedtool -D -e ionice -c2 -n7 nice -n19 dspace index-discovery -b
real 76m13.841s
user 8m22.960s
sys 2m2.498s
```
- Elizabeth from CIAT emailed to ask if I could help her by adding ORCID identifiers to all of Joseph Tohme's items
@ -56,3 +60,21 @@ $ ./add-orcid-identifiers-csv.py -i /tmp/jtohme-2018-04-04.csv -db dspace -u dsp
dc.contributor.author,cg.creator.id
"Tohme, Joseph M.",Joe Tohme: 0000-0003-2765-7101
```
- There was a quoting error in my CRP CSV and the replacements for `Forests, Trees and Agroforestry` got messed up
- So I fixed them and had to re-index again!
- I started preparing the git branch for the the DSpace 5.5→5.8 upgrade:
```
$ git checkout -b 5_x-dspace-5.8 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.8
```
- I was prepared to skip some commits that I had cherry picked from the upstream `dspace-5_x` branch when we did the DSpace 5.5 upgrade (see notes on 2016-10-19 and 2017-12-17):
- [DS-3246] Improve cleanup in recyclable components (upstream commit on dspace-5_x: 9f0f5940e7921765c6a22e85337331656b18a403)
- [DS-3250] applying patch provided by Atmire (upstream commit on dspace-5_x: c6fda557f731dbc200d7d58b8b61563f86fe6d06)
- bump up to latest minor pdfbox version (upstream commit on dspace-5_x: b5330b78153b2052ed3dc2fd65917ccdbfcc0439)
- DS-3583 Usage of correct Collection Array (#1731) (upstream commit on dspace-5_x: c8f62e6f496fa86846bfa6bcf2d16811087d9761)
- ... but somehow git knew, and didn't include them in my interactive rebase!
- I need to send this branch to Atmire and also arrange payment (see [ticket #560](https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=560) in their tracker)

31
docs/2016-10/index.html
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@ -30,7 +30,7 @@ I exported a random item’s metadata as CSV, deleted all columns except id
<meta property="article:published_time" content="2016-10-03T15:53:00&#43;03:00"/>
<meta property="article:modified_time" content="2018-03-09T22:10:33&#43;02:00"/>
<meta property="article:modified_time" content="2018-04-04T16:25:57&#43;03:00"/>
@ -73,7 +73,7 @@ I exported a random item&rsquo;s metadata as CSV, deleted all columns except id
"url": "https://alanorth.github.io/cgspace-notes/2016-10/",
"wordCount": "1828",
"datePublished": "2016-10-03T15:53:00&#43;03:00",
"dateModified": "2018-03-09T22:10:33&#43;02:00",
"dateModified": "2018-04-04T16:25:57&#43;03:00",
"author": {
"@type": "Person",
"name": "Alan Orth"
@ -266,22 +266,21 @@ DELETE 11
<h2 id="2016-10-18">2016-10-18</h2>
<ul>
<li><p>Start working on DSpace 5.5 porting work again:</p>
<li>Start working on DSpace 5.5 porting work again:
<br /></li>
</ul>
<p>$ git checkout -b 5_x-55 5_x-prod
$ git rebase -i dspace-5.5</p></li>
<pre><code>$ git checkout -b 5_x-55 5_x-prod
$ git rebase -i dspace-5.5
</code></pre>
<li><p>Have to fix about ten merge conflicts, mostly in the SCSS for the CGIAR theme</p></li>
<li><p>Skip 1e34751b8cf17021f45d4cf2b9a5800c93fb4cb2 in lieu of upstream&rsquo;s 55e623d1c2b8b7b1fa45db6728e172e06bfa8598 (fixes X-Forwarded-For header) because I had made the same fix myself and it&rsquo;s better to use the upstream one</p></li>
<li><p>I notice this rebase gets rid of GitHub merge commits&hellip; which actually might be fine because merges are fucking annoying to deal with when remote people merge without pulling and rebasing their branch first</p></li>
<li><p>Finished up applying the 5.5 sitemap changes to all themes</p></li>
<li><p>Merge the <code>discovery.xml</code> cleanups (<a href="https://github.com/ilri/DSpace/pull/278">#278</a>)</p></li>
<li><p>Merge some minor edits to the distribution license (<a href="https://github.com/ilri/DSpace/pull/285">#285</a>)</p></li>
<ul>
<li>Have to fix about ten merge conflicts, mostly in the SCSS for the CGIAR theme</li>
<li>Skip 1e34751b8cf17021f45d4cf2b9a5800c93fb4cb2 in lieu of upstream&rsquo;s 55e623d1c2b8b7b1fa45db6728e172e06bfa8598 (fixes X-Forwarded-For header) because I had made the same fix myself and it&rsquo;s better to use the upstream one</li>
<li>I notice this rebase gets rid of GitHub merge commits&hellip; which actually might be fine because merges are fucking annoying to deal with when remote people merge without pulling and rebasing their branch first</li>
<li>Finished up applying the 5.5 sitemap changes to all themes</li>
<li>Merge the <code>discovery.xml</code> cleanups (<a href="https://github.com/ilri/DSpace/pull/278">#278</a>)</li>
<li>Merge some minor edits to the distribution license (<a href="https://github.com/ilri/DSpace/pull/285">#285</a>)</li>
</ul>
<h2 id="2016-10-19">2016-10-19</h2>

4
docs/2018-03/index.html
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@ -20,7 +20,7 @@ Export a CSV of the IITA community metadata for Martin Mueller
<meta property="article:published_time" content="2018-03-02T16:07:54&#43;02:00"/>
<meta property="article:modified_time" content="2018-04-04T15:14:21&#43;03:00"/>
<meta property="article:modified_time" content="2018-04-04T15:57:34&#43;03:00"/>
@ -53,7 +53,7 @@ Export a CSV of the IITA community metadata for Martin Mueller
"url": "https://alanorth.github.io/cgspace-notes/2018-03/",
"wordCount": "2960",
"datePublished": "2018-03-02T16:07:54&#43;02:00",
"dateModified": "2018-04-04T15:14:21&#43;03:00",
"dateModified": "2018-04-04T15:57:34&#43;03:00",
"author": {
"@type": "Person",
"name": "Alan Orth"

34
docs/2018-04/index.html
View File

@ -21,7 +21,7 @@ Catalina logs at least show some memory errors yesterday:
<meta property="article:published_time" content="2018-04-01T16:13:54&#43;02:00"/>
<meta property="article:modified_time" content="2018-04-01T17:21:41&#43;03:00"/>
<meta property="article:modified_time" content="2018-04-04T15:57:34&#43;03:00"/>
@ -53,9 +53,9 @@ Catalina logs at least show some memory errors yesterday:
"@type": "BlogPosting",
"headline": "April, 2018",
"url": "https://alanorth.github.io/cgspace-notes/2018-04/",
"wordCount": "253",
"wordCount": "423",
"datePublished": "2018-04-01T16:13:54&#43;02:00",
"dateModified": "2018-04-01T17:21:41&#43;03:00",
"dateModified": "2018-04-04T15:57:34&#43;03:00",
"author": {
"@type": "Person",
"name": "Alan Orth"
@ -162,6 +162,10 @@ Fixed 1 occurences of: AGRICULTURE FOR NUTRITION AND HEALTH
<pre><code>$ export JAVA_OPTS='-Dfile.encoding=UTF-8 -Xmx1024m'
$ time schedtool -D -e ionice -c2 -n7 nice -n19 dspace index-discovery -b
real 76m13.841s
user 8m22.960s
sys 2m2.498s
</code></pre>
<ul>
@ -180,6 +184,30 @@ $ time schedtool -D -e ionice -c2 -n7 nice -n19 dspace index-discovery -b
&quot;Tohme, Joseph M.&quot;,Joe Tohme: 0000-0003-2765-7101
</code></pre>
<ul>
<li>There was a quoting error in my CRP CSV and the replacements for <code>Forests, Trees and Agroforestry</code> got messed up</li>
<li>So I fixed them and had to re-index again!</li>
<li>I started preparing the git branch for the the DSpace 5.5→5.8 upgrade:</li>
</ul>
<pre><code>$ git checkout -b 5_x-dspace-5.8 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.8
</code></pre>
<ul>
<li>I was prepared to skip some commits that I had cherry picked from the upstream <code>dspace-5_x</code> branch when we did the DSpace 5.5 upgrade (see notes on 2016-10-19 and 2017-12-17):
<ul>
<li>[DS-3246] Improve cleanup in recyclable components (upstream commit on dspace-5_x: 9f0f5940e7921765c6a22e85337331656b18a403)</li>
<li>[DS-3250] applying patch provided by Atmire (upstream commit on dspace-5_x: c6fda557f731dbc200d7d58b8b61563f86fe6d06)</li>
<li>bump up to latest minor pdfbox version (upstream commit on dspace-5_x: b5330b78153b2052ed3dc2fd65917ccdbfcc0439)</li>
<li>DS-3583 Usage of correct Collection Array (#1731) (upstream commit on dspace-5_x: c8f62e6f496fa86846bfa6bcf2d16811087d9761)</li>
</ul></li>
<li>&hellip; but somehow git knew, and didn&rsquo;t include them in my interactive rebase!</li>
<li>I need to send this branch to Atmire and also arrange payment (see <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=560">ticket #560</a> in their tracker)</li>
</ul>

14
docs/sitemap.xml
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@ -4,12 +4,12 @@
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-04/</loc>
<lastmod>2018-04-01T17:21:41+03:00</lastmod>
<lastmod>2018-04-04T15:57:34+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-03/</loc>
<lastmod>2018-04-04T15:14:21+03:00</lastmod>
<lastmod>2018-04-04T15:57:34+03:00</lastmod>
</url>
<url>
@ -99,7 +99,7 @@
<url>
<loc>https://alanorth.github.io/cgspace-notes/2016-10/</loc>
<lastmod>2018-03-09T22:10:33+02:00</lastmod>
<lastmod>2018-04-04T16:25:57+03:00</lastmod>
</url>
<url>
@ -159,7 +159,7 @@
<url>
<loc>https://alanorth.github.io/cgspace-notes/</loc>
<lastmod>2018-04-01T17:21:41+03:00</lastmod>
<lastmod>2018-04-04T15:57:34+03:00</lastmod>
<priority>0</priority>
</url>
@ -170,7 +170,7 @@
<url>
<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
<lastmod>2018-04-01T17:21:41+03:00</lastmod>
<lastmod>2018-04-04T15:57:34+03:00</lastmod>
<priority>0</priority>
</url>
@ -182,13 +182,13 @@
<url>
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
<lastmod>2018-04-01T17:21:41+03:00</lastmod>
<lastmod>2018-04-04T15:57:34+03:00</lastmod>
<priority>0</priority>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
<lastmod>2018-04-01T17:21:41+03:00</lastmod>
<lastmod>2018-04-04T15:57:34+03:00</lastmod>
<priority>0</priority>
</url>