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Add notes for 2021-08-25
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@ -355,4 +355,66 @@ $ curl -X POST 'https://cgspace.cgiar.org/explorer/api/search/scroll/DXF1ZXJ5QW5
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- I improved the quality of the "no thumbnail" placeholder image on AReS: https://github.com/ilri/OpenRXV/pull/114
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- I sent some feedback to some ILRI and CCAFS colleagues about how to use better thumbnails for publications
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## 2021-08-24
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- In the last few days I did a lot of work on OpenRXV
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- I started exploring the Angular 9.0 to 9.1 update
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- I tested some updates to dependencies for Angular 9 that we somehow missed, like @tinymce/tinymce-angular, @nicky-lenaers/ngx-scroll-to, and @ng-select/ng-select
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- I changed the default target from ES5 to ES2015 because ES5 was released in 2009 and the only thing we lose by moving to ES2015 is IE11 support
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- I fixed a handful of issues in the Docker build and deployment process
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- I started exploring changing the Docker configuration from using volumes to `COPY` instructions in the `Dockerfile` because we are having sporadic issues with permissions in containers caused by copying the host's frontend/backend directories and not being able to write to them
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- I tested moving from node-sass to sass, as it has been [supported since Angular 8 apparently](https://blog.ninja-squad.com/2019/05/29/angular-cli-8.0/) and will allow us to avoid stupid node-gyp issues
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## 2021-08-25
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- I did a bunch of tests of the OpenRXV Angular 9.1 update and merged it to master ([#115](https://github.com/ilri/OpenRXV/pull/115))
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- Last week Maria Garruccio sent me a handful of new ORCID identifiers for Bioversity staff
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- We currently have 1320 unique identifiers, so this adds eleven new ones:
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```console
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$ cat ~/src/git/DSpace/dspace/config/controlled-vocabularies/cg-creator-identifier.xml /tmp/bioversity-orcids.txt | grep -oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort | uniq > /tmp/2021-08-25-combined-orcids.txt
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$ wc -l /tmp/2021-08-25-combined-orcids.txt
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1331
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```
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- After I combined them and removed duplicates, I resolved all the names using my `resolve-orcids.py` script:
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```console
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$ ./ilri/resolve-orcids.py -i /tmp/2021-08-25-combined-orcids.txt -o /tmp/2021-08-25-combined-orcids-names.txt
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```
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- Tag existing items from the Alliance's new authors with ORCID iDs using `add-orcid-identifiers-csv.py` (181 new metadata fields added):
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```console
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$ cat 2021-08-25-add-orcids.csv
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dc.contributor.author,cg.creator.identifier
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"Chege, Christine G. Kiria","Christine G.Kiria Chege: 0000-0001-8360-0279"
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"Chege, Christine Kiria","Christine G.Kiria Chege: 0000-0001-8360-0279"
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"Kiria, C.","Christine G.Kiria Chege: 0000-0001-8360-0279"
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"Kinyua, Ivy","Ivy Kinyua :0000-0002-1978-8833"
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"Rahn, E.","Eric Rahn: 0000-0001-6280-7430"
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"Rahn, Eric","Eric Rahn: 0000-0001-6280-7430"
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"Jager M.","Matthias Jager: 0000-0003-1059-3949"
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"Jager, M.","Matthias Jager: 0000-0003-1059-3949"
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"Jager, Matthias","Matthias Jager: 0000-0003-1059-3949"
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"Waswa, Boaz","Boaz Waswa: 0000-0002-0066-0215"
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"Waswa, Boaz S.","Boaz Waswa: 0000-0002-0066-0215"
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"Rivera, Tatiana","Tatiana Rivera: 0000-0003-4876-5873"
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"Andrade, Robert","Robert Andrade: 0000-0002-5764-3854"
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"Ceccarelli, Viviana","Viviana Ceccarelli: 0000-0003-2160-9483"
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"Ceccarellia, Viviana","Viviana Ceccarelli: 0000-0003-2160-9483"
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"Nyawira, Sylvia","Sylvia Sarah Nyawira: 0000-0003-4913-1389"
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"Nyawira, Sylvia S.","Sylvia Sarah Nyawira: 0000-0003-4913-1389"
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"Nyawira, Sylvia Sarah","Sylvia Sarah Nyawira: 0000-0003-4913-1389"
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"Groot, J.C.","Groot, J.C.J.: 0000-0001-6516-5170"
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"Groot, J.C.J.","Groot, J.C.J.: 0000-0001-6516-5170"
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"Groot, Jeroen C.J.","Groot, J.C.J.: 0000-0001-6516-5170"
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"Groot, Jeroen CJ","Groot, J.C.J.: 0000-0001-6516-5170"
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"Abera, W.","Wuletawu Abera: 0000-0002-3657-5223"
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"Abera, Wuletawu","Wuletawu Abera: 0000-0002-3657-5223"
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"Kanyenga Lubobo, Antoine","Antoine Lubobo Kanyenga: 0000-0003-0806-9304"
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"Lubobo Antoine, Kanyenga","Antoine Lubobo Kanyenga: 0000-0003-0806-9304"
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$ ./ilri/add-orcid-identifiers-csv.py -i 2021-08-25-add-orcids.csv -db dspace -u dspace -p 'fuuu'
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```
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<!-- v[im: set sw=2 ts=2: -->
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@ -18,7 +18,7 @@ I decided to upgrade linode20 from Ubuntu 18.04 to 20.04
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<meta property="og:type" content="article" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2021-08/" />
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<meta property="article:published_time" content="2021-08-01T09:01:07+03:00" />
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<meta property="article:modified_time" content="2021-08-18T16:24:40+03:00" />
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<meta property="article:modified_time" content="2021-08-19T22:32:35+03:00" />
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@ -42,9 +42,9 @@ I decided to upgrade linode20 from Ubuntu 18.04 to 20.04
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"@type": "BlogPosting",
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"headline": "August, 2021",
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"url": "https://alanorth.github.io/cgspace-notes/2021-08/",
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"wordCount": "2675",
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"wordCount": "3064",
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"datePublished": "2021-08-01T09:01:07+03:00",
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"dateModified": "2021-08-18T16:24:40+03:00",
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"dateModified": "2021-08-19T22:32:35+03:00",
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"author": {
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"@type": "Person",
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"name": "Alan Orth"
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@ -503,7 +503,68 @@ $ curl -X POST 'https://cgspace.cgiar.org/explorer/api/search/scroll/DXF1ZXJ5QW5
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<li>I improved the quality of the “no thumbnail” placeholder image on AReS: <a href="https://github.com/ilri/OpenRXV/pull/114">https://github.com/ilri/OpenRXV/pull/114</a></li>
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<li>I sent some feedback to some ILRI and CCAFS colleagues about how to use better thumbnails for publications</li>
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</ul>
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<!-- raw HTML omitted -->
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<h2 id="2021-08-24">2021-08-24</h2>
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<ul>
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<li>In the last few days I did a lot of work on OpenRXV
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<ul>
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<li>I started exploring the Angular 9.0 to 9.1 update</li>
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<li>I tested some updates to dependencies for Angular 9 that we somehow missed, like @tinymce/tinymce-angular, @nicky-lenaers/ngx-scroll-to, and @ng-select/ng-select</li>
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<li>I changed the default target from ES5 to ES2015 because ES5 was released in 2009 and the only thing we lose by moving to ES2015 is IE11 support</li>
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<li>I fixed a handful of issues in the Docker build and deployment process</li>
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<li>I started exploring changing the Docker configuration from using volumes to <code>COPY</code> instructions in the <code>Dockerfile</code> because we are having sporadic issues with permissions in containers caused by copying the host’s frontend/backend directories and not being able to write to them</li>
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<li>I tested moving from node-sass to sass, as it has been <a href="https://blog.ninja-squad.com/2019/05/29/angular-cli-8.0/">supported since Angular 8 apparently</a> and will allow us to avoid stupid node-gyp issues</li>
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</ul>
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</li>
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</ul>
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<h2 id="2021-08-25">2021-08-25</h2>
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<ul>
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<li>I did a bunch of tests of the OpenRXV Angular 9.1 update and merged it to master (<a href="https://github.com/ilri/OpenRXV/pull/115">#115</a>)</li>
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<li>Last week Maria Garruccio sent me a handful of new ORCID identifiers for Bioversity staff
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<ul>
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<li>We currently have 1320 unique identifiers, so this adds eleven new ones:</li>
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</ul>
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</li>
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</ul>
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<pre><code class="language-console" data-lang="console">$ cat ~/src/git/DSpace/dspace/config/controlled-vocabularies/cg-creator-identifier.xml /tmp/bioversity-orcids.txt | grep -oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort | uniq > /tmp/2021-08-25-combined-orcids.txt
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$ wc -l /tmp/2021-08-25-combined-orcids.txt
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1331
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</code></pre><ul>
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<li>After I combined them and removed duplicates, I resolved all the names using my <code>resolve-orcids.py</code> script:</li>
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</ul>
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<pre><code class="language-console" data-lang="console">$ ./ilri/resolve-orcids.py -i /tmp/2021-08-25-combined-orcids.txt -o /tmp/2021-08-25-combined-orcids-names.txt
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</code></pre><ul>
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<li>Tag existing items from the Alliance’s new authors with ORCID iDs using <code>add-orcid-identifiers-csv.py</code> (181 new metadata fields added):</li>
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</ul>
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<pre><code class="language-console" data-lang="console">$ cat 2021-08-25-add-orcids.csv
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dc.contributor.author,cg.creator.identifier
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"Chege, Christine G. Kiria","Christine G.Kiria Chege: 0000-0001-8360-0279"
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"Chege, Christine Kiria","Christine G.Kiria Chege: 0000-0001-8360-0279"
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"Kiria, C.","Christine G.Kiria Chege: 0000-0001-8360-0279"
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"Kinyua, Ivy","Ivy Kinyua :0000-0002-1978-8833"
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"Rahn, E.","Eric Rahn: 0000-0001-6280-7430"
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"Rahn, Eric","Eric Rahn: 0000-0001-6280-7430"
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"Jager M.","Matthias Jager: 0000-0003-1059-3949"
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"Jager, M.","Matthias Jager: 0000-0003-1059-3949"
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"Jager, Matthias","Matthias Jager: 0000-0003-1059-3949"
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"Waswa, Boaz","Boaz Waswa: 0000-0002-0066-0215"
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"Waswa, Boaz S.","Boaz Waswa: 0000-0002-0066-0215"
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"Rivera, Tatiana","Tatiana Rivera: 0000-0003-4876-5873"
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"Andrade, Robert","Robert Andrade: 0000-0002-5764-3854"
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"Ceccarelli, Viviana","Viviana Ceccarelli: 0000-0003-2160-9483"
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"Ceccarellia, Viviana","Viviana Ceccarelli: 0000-0003-2160-9483"
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"Nyawira, Sylvia","Sylvia Sarah Nyawira: 0000-0003-4913-1389"
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"Nyawira, Sylvia S.","Sylvia Sarah Nyawira: 0000-0003-4913-1389"
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"Nyawira, Sylvia Sarah","Sylvia Sarah Nyawira: 0000-0003-4913-1389"
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"Groot, J.C.","Groot, J.C.J.: 0000-0001-6516-5170"
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"Groot, J.C.J.","Groot, J.C.J.: 0000-0001-6516-5170"
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"Groot, Jeroen C.J.","Groot, J.C.J.: 0000-0001-6516-5170"
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"Groot, Jeroen CJ","Groot, J.C.J.: 0000-0001-6516-5170"
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"Abera, W.","Wuletawu Abera: 0000-0002-3657-5223"
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"Abera, Wuletawu","Wuletawu Abera: 0000-0002-3657-5223"
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"Kanyenga Lubobo, Antoine","Antoine Lubobo Kanyenga: 0000-0003-0806-9304"
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"Lubobo Antoine, Kanyenga","Antoine Lubobo Kanyenga: 0000-0003-0806-9304"
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$ ./ilri/add-orcid-identifiers-csv.py -i 2021-08-25-add-orcids.csv -db dspace -u dspace -p 'fuuu'
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</code></pre><!-- raw HTML omitted -->
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2021-08-18T16:24:40+03:00" />
|
||||
<meta property="og:updated_time" content="2021-08-19T22:32:35+03:00" />
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@ -10,7 +10,7 @@
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2021-08-18T16:24:40+03:00" />
|
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<meta property="og:updated_time" content="2021-08-19T22:32:35+03:00" />
|
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|
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@ -10,7 +10,7 @@
|
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2021-08-18T16:24:40+03:00" />
|
||||
<meta property="og:updated_time" content="2021-08-19T22:32:35+03:00" />
|
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|
||||
|
||||
|
||||
|
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2021-08-18T16:24:40+03:00" />
|
||||
<meta property="og:updated_time" content="2021-08-19T22:32:35+03:00" />
|
||||
|
||||
|
||||
|
||||
|
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2021-08-18T16:24:40+03:00" />
|
||||
<meta property="og:updated_time" content="2021-08-19T22:32:35+03:00" />
|
||||
|
||||
|
||||
|
||||
|
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2021-08-18T16:24:40+03:00" />
|
||||
<meta property="og:updated_time" content="2021-08-19T22:32:35+03:00" />
|
||||
|
||||
|
||||
|
||||
|
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2021-08-18T16:24:40+03:00" />
|
||||
<meta property="og:updated_time" content="2021-08-19T22:32:35+03:00" />
|
||||
|
||||
|
||||
|
||||
|
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2021-08-18T16:24:40+03:00" />
|
||||
<meta property="og:updated_time" content="2021-08-19T22:32:35+03:00" />
|
||||
|
||||
|
||||
|
||||
|
@ -3,19 +3,19 @@
|
||||
xmlns:xhtml="http://www.w3.org/1999/xhtml">
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2021-08/</loc>
|
||||
<lastmod>2021-08-18T16:24:40+03:00</lastmod>
|
||||
<lastmod>2021-08-19T22:32:35+03:00</lastmod>
|
||||
</url><url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
|
||||
<lastmod>2021-08-18T16:24:40+03:00</lastmod>
|
||||
<lastmod>2021-08-19T22:32:35+03:00</lastmod>
|
||||
</url><url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/</loc>
|
||||
<lastmod>2021-08-18T16:24:40+03:00</lastmod>
|
||||
<lastmod>2021-08-19T22:32:35+03:00</lastmod>
|
||||
</url><url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
|
||||
<lastmod>2021-08-18T16:24:40+03:00</lastmod>
|
||||
<lastmod>2021-08-19T22:32:35+03:00</lastmod>
|
||||
</url><url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
|
||||
<lastmod>2021-08-18T16:24:40+03:00</lastmod>
|
||||
<lastmod>2021-08-19T22:32:35+03:00</lastmod>
|
||||
</url><url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2021-07/</loc>
|
||||
<lastmod>2021-08-01T16:19:05+03:00</lastmod>
|
||||
|
Loading…
Reference in New Issue
Block a user