Add notes for 2020-09-02

2024-12-27 15:34:30 +01:00 · 2020-09-02 13:39:11 +03:00 · 2020-09-02 13:39:11 +03:00 · bf708e0d70
commit bf708e0d70
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--- a/content/posts/2020-08.md
+++ b/content/posts/2020-08.md
@ -536,4 +536,20 @@ $ grep -oE '[0-9]+/[0-9]+' /tmp/ids.txt > /tmp/handles.txt
  - The group members are the same so I went through and replaced the `CCAFS approvers1` group everywhere manually...
  - I also removed some old CCAFS users from the groups

+## 2020-08-27
+
+- I ran the CountryCodeTagger on CGSpace and it was very fast:
+
+```
+$ time chrt -b 0 dspace curate -t countrycodetagger -i all -r - -l 500 -s object | tee /tmp/2020-08-27-countrycodetagger.log
+real    2m7.643s
+user    1m48.740s
+sys     0m14.518s
+$ grep -c added /tmp/2020-08-27-countrycodetagger.log
+46
+```
+
+- I still haven't created a cron job for it... but it's good to know that when it doesn't need to add very many country codes that it is very fast (original run a few weeks ago added 50,000 country codes)
+  - I wonder how DSpace 6 will perform when it doesn't need to add all the codes, like after the initial run
+
 <!-- vim: set sw=2 ts=2: -->
--- a/content/posts/2020-09.md
+++ b/content/posts/2020-09.md
@ -0,0 +1,52 @@
+---
+title: "September, 2020"
+date: 2020-09-02T15:35:54+03:00
+author: "Alan Orth"
+categories: ["Notes"]
+---
+
+## 2020-09-02
+
+- Replace Marissa van Epp for Rhys Bucknall in the CCAFS groups on CGSpace because Marissa no longer works at CCAFS
+- The AReS Explorer hasn't updated its index since 2020-08-22 when I last forced it
+  - I restarted it again now and told Moayad that the automatic indexing isn't working
+- Add `Alliance of Bioversity International and CIAT` to affiliations on CGSpace
+- Abenet told me that the general search text on AReS doesn't get reset when you use the "Reset Filters" button
+  - I filed a bug on OpenRXV: https://github.com/ilri/OpenRXV/issues/39
+- I filed an issue on OpenRXV to make some minor edits to the admin UI: https://github.com/ilri/OpenRXV/issues/40
+
+<!--more-->
+
+- I ran the country code tagger on CGSpace:
+
+```
+$ time chrt -b 0 dspace curate -t countrycodetagger -i all -r - -l 500 -s object | tee /tmp/2020-09-02-countrycodetagger.log
+...
+real    2m10.516s
+user    1m43.953s
+sys     0m15.192s
+$ grep -c added /tmp/2020-09-02-countrycodetagger.log
+39
+```
+
+- I still need to create a cron job for this...
+- Sisay and Abenet said they can't log in with LDAP on DSpace Test (DSpace 6)
+  - I tried and I can't either... but it is working on CGSpace
+  - The error on DSpace 6 is:
+
+```
+2020-09-02 12:03:10,666 INFO  org.dspace.authenticate.LDAPAuthentication @ anonymous:session_id=A629116488DCC467E1EA2062A2E2EFD7:ip_addr=92.220.02.201:failed_login:no DN found for user aorth
+```
+
+- I tried to query LDAP directly using the application credentials with ldapsearch and it works:
+
+```
+$ ldapsearch -x -H ldaps://AZCGNEROOT2.CGIARAD.ORG:636/ -b "dc=cgiarad,dc=org" -D "applicationaccount@cgiarad.org" -W "(sAMAccountName=me)"
+```
+
+- According to the [DSpace 6 docs](https://wiki.lyrasis.org/display/DSDOC6x/Authentication+Plugins#AuthenticationPlugins-LDAPAuthentication) we need to escape commas in our LDAP parameters due to the new configuration system
+  - I added the commas and restarted DSpace (though technically we shouldn't need to restart due to the new config system hot reloading configs)
+  - Run all system updates on DSpace Test (linode26) and reboot it
+  - After the restart LDAP login works...
+
+<!-- vim: set sw=2 ts=2: -->
--- a/docs/2020-08/index.html
+++ b/docs/2020-08/index.html
@ -19,7 +19,7 @@ It is class based so I can easily add support for other vocabularies, and the te
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-<meta property="article:modified_time" content="2020-08-20T17:35:11+03:00" />
+<meta property="article:modified_time" content="2020-08-22T13:29:08+03:00" />

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@ -43,9 +43,9 @@ It is class based so I can easily add support for other vocabularies, and the te
  "@type": "BlogPosting",
  "headline": "August, 2020",
  "url": "https://alanorth.github.io/cgspace-notes/2020-08/",
-  "wordCount": "3567",
+  "wordCount": "3672",
  "datePublished": "2020-08-02T15:35:54+03:00",
-  "dateModified": "2020-08-20T17:35:11+03:00",
+  "dateModified": "2020-08-22T13:29:08+03:00",
  "author": {
    "@type": "Person",
    "name": "Alan Orth"
@ -757,6 +757,23 @@ $ grep -oE '[0-9]+/[0-9]+' /tmp/ids.txt &gt; /tmp/handles.txt
 </ul>
 </li>
 </ul>
+<h2 id="2020-08-27">2020-08-27</h2>
+<ul>
+<li>I ran the CountryCodeTagger on CGSpace and it was very fast:</li>
+</ul>
+<pre><code>$ time chrt -b 0 dspace curate -t countrycodetagger -i all -r - -l 500 -s object | tee /tmp/2020-08-27-countrycodetagger.log
+real    2m7.643s
+user    1m48.740s
+sys     0m14.518s
+$ grep -c added /tmp/2020-08-27-countrycodetagger.log
+46
+</code></pre><ul>
+<li>I still haven&rsquo;t created a cron job for it&hellip; but it&rsquo;s good to know that when it doesn&rsquo;t need to add very many country codes that it is very fast (original run a few weeks ago added 50,000 country codes)
+<ul>
+<li>I wonder how DSpace 6 will perform when it doesn&rsquo;t need to add all the codes, like after the initial run</li>
+</ul>
+</li>
+</ul>
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@ -4,27 +4,27 @@
  
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