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Add notes for 2017-02-07
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24
content/post/2017-02.md
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24
content/post/2017-02.md
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+++
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date = "2017-02-07T07:04:52-08:00"
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author = "Alan Orth"
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title = "February, 2017"
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tags = ["Notes"]
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+++
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## 2017-02-07
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- An item was mapped twice erroneously again, so I had to remove one of the mappings manually:
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```
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dspace=# select * from collection2item where item_id = '80278';
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id | collection_id | item_id
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-------+---------------+---------
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92551 | 313 | 80278
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92550 | 313 | 80278
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90774 | 1051 | 80278
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(3 rows)
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dspace=# delete from collection2item where id = 92551 and item_id = 80278;
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DELETE 1
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```
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<!--more-->
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@ -314,6 +314,8 @@ db.statementpool = true
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -322,8 +324,6 @@ db.statementpool = true
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -331,6 +331,8 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -339,8 +341,6 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -246,6 +246,8 @@ $ find SimpleArchiveForBio/ -iname “*.pdf” -exec basename {} \; | so
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -254,8 +256,6 @@ $ find SimpleArchiveForBio/ -iname “*.pdf” -exec basename {} \; | so
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -499,6 +499,8 @@ Bitstream: tést señora alimentación.pdf
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -507,8 +509,6 @@ Bitstream: tést señora alimentación.pdf
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -399,6 +399,8 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -407,8 +409,6 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -616,6 +616,8 @@ dspace.log.2016-04-27:7271
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -624,8 +626,6 @@ dspace.log.2016-04-27:7271
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -466,6 +466,8 @@ sys 0m20.540s
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -474,8 +476,6 @@ sys 0m20.540s
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -511,6 +511,8 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -519,8 +521,6 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -429,6 +429,8 @@ discovery.index.authority.ignore-variants=true
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -437,8 +439,6 @@ discovery.index.authority.ignore-variants=true
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -502,6 +502,8 @@ $ JAVA_OPTS="-Dfile.encoding=UTF-8 -Xmx512m" /home/cgspace.cgiar.org/b
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -510,8 +512,6 @@ $ JAVA_OPTS="-Dfile.encoding=UTF-8 -Xmx512m" /home/cgspace.cgiar.org/b
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -802,6 +802,8 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -810,8 +812,6 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -488,6 +488,8 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -496,8 +498,6 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -704,6 +704,8 @@ org.dspace.discovery.SearchServiceException: Error executing query
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -712,8 +714,6 @@ org.dspace.discovery.SearchServiceException: Error executing query
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -940,6 +940,8 @@ $ exit
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -948,8 +950,6 @@ $ exit
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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@ -485,6 +485,8 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
|
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|
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<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
|
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<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
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<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
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@ -493,8 +495,6 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
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<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
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<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
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</ol>
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</section>
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247
public/2017-02/index.html
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247
public/2017-02/index.html
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<!DOCTYPE html>
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<html lang="en">
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<head>
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<meta charset="utf-8">
|
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<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
|
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<meta property="og:title" content="February, 2017" />
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<meta property="og:description" content="2017-02-07
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An item was mapped twice erroneously again, so I had to remove one of the mappings manually:
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|
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dspace=# select * from collection2item where item_id = '80278';
|
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id | collection_id | item_id
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-------+---------------+---------
|
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92551 | 313 | 80278
|
||||
92550 | 313 | 80278
|
||||
90774 | 1051 | 80278
|
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(3 rows)
|
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dspace=# delete from collection2item where id = 92551 and item_id = 80278;
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DELETE 1
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|
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|
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" />
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<meta property="og:type" content="article" />
|
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2017-02/" />
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<meta property="article:published_time" content="2017-02-07T07:04:52-08:00"/>
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<meta property="article:modified_time" content="2017-02-07T07:04:52-08:00"/>
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|
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|
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|
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|
||||
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|
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|
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|
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|
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<meta name="twitter:card" content="summary"/>
|
||||
|
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|
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|
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<meta name="twitter:title" content="February, 2017"/>
|
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<meta name="twitter:description" content="2017-02-07
|
||||
|
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|
||||
An item was mapped twice erroneously again, so I had to remove one of the mappings manually:
|
||||
|
||||
|
||||
dspace=# select * from collection2item where item_id = '80278';
|
||||
id | collection_id | item_id
|
||||
-------+---------------+---------
|
||||
92551 | 313 | 80278
|
||||
92550 | 313 | 80278
|
||||
90774 | 1051 | 80278
|
||||
(3 rows)
|
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dspace=# delete from collection2item where id = 92551 and item_id = 80278;
|
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DELETE 1
|
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|
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|
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"/>
|
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|
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|
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<meta name="generator" content="Hugo 0.18.1" />
|
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|
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|
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|
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<script type="application/ld+json">
|
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{
|
||||
"@context": "http://schema.org",
|
||||
"@type": "BlogPosting",
|
||||
|
||||
"headline": "February, 2017",
|
||||
"url": "https://alanorth.github.io/cgspace-notes/2017-02/",
|
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"wordCount": "64",
|
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|
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"datePublished": "2017-02-07T07:04:52-08:00",
|
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|
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|
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"dateModified": "2017-02-07T07:04:52-08:00",
|
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|
||||
|
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"author": {
|
||||
"@type": "Person",
|
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"name": "Alan Orth"
|
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}
|
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|
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,
|
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"keywords": "Notes"
|
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|
||||
}
|
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</script>
|
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|
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|
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|
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<link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2017-02/">
|
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|
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<title>February, 2017 | CGSpace Notes</title>
|
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|
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<!-- combined, minified CSS -->
|
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<link href="https://alanorth.github.io/cgspace-notes/css/style.css" rel="stylesheet" integrity="sha384-qRVpIj9hSzsBhmO8Y7YEKF2UFra2sJQtl9V/uFKKDvy+Wjh9zgTku6VRgT8YdPoD" crossorigin="anonymous">
|
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|
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|
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|
||||
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|
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|
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</head>
|
||||
|
||||
<body>
|
||||
|
||||
<div class="blog-masthead">
|
||||
<div class="container">
|
||||
<nav class="nav blog-nav">
|
||||
<a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
|
||||
|
||||
|
||||
|
||||
</nav>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<header class="blog-header">
|
||||
<div class="container">
|
||||
<h1 class="blog-title"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
|
||||
<p class="lead blog-description">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
|
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</div>
|
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</header>
|
||||
|
||||
<div class="container">
|
||||
<div class="row">
|
||||
<div class="col-sm-8 blog-main">
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||||
|
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|
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|
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|
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<article class="blog-post">
|
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<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-02/">February, 2017</a></h2>
|
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<p class="blog-post-meta"><time datetime="2017-02-07T07:04:52-08:00">Tue Feb 07, 2017</time> by Alan Orth in
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|
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<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
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|
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</p>
|
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</header>
|
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<h2 id="2017-02-07">2017-02-07</h2>
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|
||||
<ul>
|
||||
<li>An item was mapped twice erroneously again, so I had to remove one of the mappings manually:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>dspace=# select * from collection2item where item_id = '80278';
|
||||
id | collection_id | item_id
|
||||
-------+---------------+---------
|
||||
92551 | 313 | 80278
|
||||
92550 | 313 | 80278
|
||||
90774 | 1051 | 80278
|
||||
(3 rows)
|
||||
dspace=# delete from collection2item where id = 92551 and item_id = 80278;
|
||||
DELETE 1
|
||||
</code></pre>
|
||||
|
||||
<p></p>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
</div> <!-- /.blog-main -->
|
||||
|
||||
<aside class="col-sm-3 offset-sm-1 blog-sidebar">
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<section class="sidebar-module">
|
||||
<h4>Recent Posts</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-11/">November, 2016</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
||||
|
||||
|
||||
<section class="sidebar-module">
|
||||
<h4>Links</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
|
||||
|
||||
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
|
||||
|
||||
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
</aside>
|
||||
|
||||
|
||||
</div> <!-- /.row -->
|
||||
</div> <!-- /.container -->
|
||||
|
||||
<footer class="blog-footer">
|
||||
<p>
|
||||
|
||||
Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
|
||||
|
||||
</p>
|
||||
<p>
|
||||
<a href="#">Back to top</a>
|
||||
</p>
|
||||
</footer>
|
||||
|
||||
</body>
|
||||
|
||||
</html>
|
@ -13,7 +13,7 @@
|
||||
|
||||
|
||||
|
||||
<meta property="og:updated_time" content="2017-01-02T10:43:00+03:00"/>
|
||||
<meta property="og:updated_time" content="2017-02-07T07:04:52-08:00"/>
|
||||
|
||||
|
||||
|
||||
@ -43,7 +43,7 @@
|
||||
},
|
||||
|
||||
|
||||
"dateModified": "2017-01-02T10:43:00+03:00",
|
||||
"dateModified": "2017-02-07T07:04:52-08:00",
|
||||
|
||||
|
||||
|
||||
@ -105,6 +105,39 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-02/">February, 2017</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2017-02-07T07:04:52-08:00">Tue Feb 07, 2017</time> by Alan Orth in
|
||||
|
||||
<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2017-02-07">2017-02-07</h2>
|
||||
|
||||
<ul>
|
||||
<li>An item was mapped twice erroneously again, so I had to remove one of the mappings manually:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>dspace=# select * from collection2item where item_id = '80278';
|
||||
id | collection_id | item_id
|
||||
-------+---------------+---------
|
||||
92551 | 313 | 80278
|
||||
92550 | 313 | 80278
|
||||
90774 | 1051 | 80278
|
||||
(3 rows)
|
||||
dspace=# delete from collection2item where id = 92551 and item_id = 80278;
|
||||
DELETE 1
|
||||
</code></pre>
|
||||
|
||||
<p></p>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2017-02/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-01/">January, 2017</a></h2>
|
||||
@ -371,32 +404,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-04/">April, 2016</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2016-04-04T11:06:00+03:00">Mon Apr 04, 2016</time> by Alan Orth in
|
||||
|
||||
<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2016-04-04">2016-04-04</h2>
|
||||
|
||||
<ul>
|
||||
<li>Looking at log file use on CGSpace and notice that we need to work on our cron setup a bit</li>
|
||||
<li>We are backing up all logs in the log folder, including useless stuff like solr, cocoon, handle-plugin, etc</li>
|
||||
<li>After running DSpace for over five years I’ve never needed to look in any other log file than dspace.log, leave alone one from last year!</li>
|
||||
<li>This will save us a few gigs of backup space we’re paying for on S3</li>
|
||||
<li>Also, I noticed the <code>checker</code> log has some errors we should pay attention to:</li>
|
||||
</ul>
|
||||
|
||||
<p></p>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2016-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
|
||||
@ -421,6 +428,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
<h4>Recent Posts</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
|
||||
@ -429,8 +438,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
182
public/index.xml
182
public/index.xml
@ -6,9 +6,35 @@
|
||||
<description>Recent content on CGSpace Notes</description>
|
||||
<generator>Hugo -- gohugo.io</generator>
|
||||
<language>en-us</language>
|
||||
<lastBuildDate>Mon, 02 Jan 2017 10:43:00 +0300</lastBuildDate>
|
||||
<lastBuildDate>Tue, 07 Feb 2017 07:04:52 -0800</lastBuildDate>
|
||||
<atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" />
|
||||
|
||||
<item>
|
||||
<title>February, 2017</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2017-02/</link>
|
||||
<pubDate>Tue, 07 Feb 2017 07:04:52 -0800</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2017-02/</guid>
|
||||
<description><h2 id="2017-02-07">2017-02-07</h2>
|
||||
|
||||
<ul>
|
||||
<li>An item was mapped twice erroneously again, so I had to remove one of the mappings manually:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>dspace=# select * from collection2item where item_id = '80278';
|
||||
id | collection_id | item_id
|
||||
-------+---------------+---------
|
||||
92551 | 313 | 80278
|
||||
92550 | 313 | 80278
|
||||
90774 | 1051 | 80278
|
||||
(3 rows)
|
||||
dspace=# delete from collection2item where id = 92551 and item_id = 80278;
|
||||
DELETE 1
|
||||
</code></pre>
|
||||
|
||||
<p></p></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>January, 2017</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2017-01/</link>
|
||||
@ -5168,160 +5194,6 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
|
||||
<ul>
|
||||
<li>Switch CGSpace log compression cron jobs from using lzop to xz—the compression isn&rsquo;t as good, but it&rsquo;s much faster and causes less IO/CPU load</li>
|
||||
<li>Since we figured out (and fixed) the cause of the performance issue, I reverted Google Bot&rsquo;s crawl rate to the &ldquo;Let Google optimize&rdquo; setting</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>November, 2015</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2015-11/</link>
|
||||
<pubDate>Mon, 23 Nov 2015 17:00:57 +0300</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2015-11/</guid>
|
||||
<description><h2 id="2015-11-22">2015-11-22</h2>
|
||||
|
||||
<ul>
|
||||
<li>CGSpace went down</li>
|
||||
<li>Looks like DSpace exhausted its PostgreSQL connection pool</li>
|
||||
<li>Last week I had increased the limit from 30 to 60, which seemed to help, but now there are many more idle connections:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
78
|
||||
</code></pre>
|
||||
|
||||
<p></p>
|
||||
|
||||
<ul>
|
||||
<li>For now I have increased the limit from 60 to 90, run updates, and rebooted the server</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-24">2015-11-24</h2>
|
||||
|
||||
<ul>
|
||||
<li>CGSpace went down again</li>
|
||||
<li>Getting emails from uptimeRobot and uptimeButler that it&rsquo;s down, and Google Webmaster Tools is sending emails that there is an increase in crawl errors</li>
|
||||
<li>Looks like there are still a bunch of idle PostgreSQL connections:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
96
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>For some reason the number of idle connections is very high since we upgraded to DSpace 5</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-25">2015-11-25</h2>
|
||||
|
||||
<ul>
|
||||
<li>Troubleshoot the DSpace 5 OAI breakage caused by nginx routing config</li>
|
||||
<li>The OAI application requests stylesheets and javascript files with the path <code>/oai/static/css</code>, which gets matched here:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code># static assets we can load from the file system directly with nginx
|
||||
location ~ /(themes|static|aspects/ReportingSuite) {
|
||||
try_files $uri @tomcat;
|
||||
...
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>The document root is relative to the xmlui app, so this gets a 404—I&rsquo;m not sure why it doesn&rsquo;t pass to <code>@tomcat</code></li>
|
||||
<li>Anyways, I can&rsquo;t find any URIs with path <code>/static</code>, and the more important point is to handle all the static theme assets, so we can just remove <code>static</code> from the regex for now (who cares if we can&rsquo;t use nginx to send Etags for OAI CSS!)</li>
|
||||
<li>Also, I noticed we aren&rsquo;t setting CSP headers on the static assets, because in nginx headers are inherited in child blocks, but if you use <code>add_header</code> in a child block it doesn&rsquo;t inherit the others</li>
|
||||
<li>We simply need to add <code>include extra-security.conf;</code> to the above location block (but research and test first)</li>
|
||||
<li>We should add WOFF assets to the list of things to set expires for:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>location ~* \.(?:ico|css|js|gif|jpe?g|png|woff)$ {
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>We should also add <code>aspects/Statistics</code> to the location block for static assets (minus <code>static</code> from above):</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>location ~ /(themes|aspects/ReportingSuite|aspects/Statistics) {
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Need to check <code>/about</code> on CGSpace, as it&rsquo;s blank on my local test server and we might need to add something there</li>
|
||||
<li>CGSpace has been up and down all day due to PostgreSQL idle connections (current DSpace pool is 90):</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
93
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>I looked closer at the idle connections and saw that many have been idle for hours (current time on server is <code>2015-11-25T20:20:42+0000</code>):</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | less -S
|
||||
datid | datname | pid | usesysid | usename | application_name | client_addr | client_hostname | client_port | backend_start | xact_start |
|
||||
-------+----------+-------+----------+----------+------------------+-------------+-----------------+-------------+-------------------------------+-------------------------------+---
|
||||
20951 | cgspace | 10966 | 18205 | cgspace | | 127.0.0.1 | | 37731 | 2015-11-25 13:13:02.837624+00 | | 20
|
||||
20951 | cgspace | 10967 | 18205 | cgspace | | 127.0.0.1 | | 37737 | 2015-11-25 13:13:03.069421+00 | | 20
|
||||
...
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>There is a relevant Jira issue about this: <a href="https://jira.duraspace.org/browse/DS-1458">https://jira.duraspace.org/browse/DS-1458</a></li>
|
||||
<li>It seems there is some sense changing DSpace&rsquo;s default <code>db.maxidle</code> from unlimited (-1) to something like 8 (Tomcat default) or 10 (Confluence default)</li>
|
||||
<li>Change <code>db.maxidle</code> from -1 to 10, reduce <code>db.maxconnections</code> from 90 to 50, and restart postgres and tomcat7</li>
|
||||
<li>Also redeploy DSpace Test with a clean sync of CGSpace and mirror these database settings there as well</li>
|
||||
<li>Also deploy the nginx fixes for the <code>try_files</code> location block as well as the expires block</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-26">2015-11-26</h2>
|
||||
|
||||
<ul>
|
||||
<li>CGSpace behaving much better since changing <code>db.maxidle</code> yesterday, but still two up/down notices from monitoring this morning (better than 50!)</li>
|
||||
<li>CCAFS colleagues mentioned that the REST API is very slow, 24 seconds for one item</li>
|
||||
<li>Not as bad for me, but still unsustainable if you have to get many:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle/10568/32802?expand=all
|
||||
8.415
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Monitoring e-mailed in the evening to say CGSpace was down</li>
|
||||
<li>Idle connections in PostgreSQL again:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep cgspace | grep -c idle
|
||||
66
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>At the time, the current DSpace pool size was 50&hellip;</li>
|
||||
<li>I reduced the pool back to the default of 30, and reduced the <code>db.maxidle</code> settings from 10 to 8</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-29">2015-11-29</h2>
|
||||
|
||||
<ul>
|
||||
<li>Still more alerts that CGSpace has been up and down all day</li>
|
||||
<li>Current database settings for DSpace:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>db.maxconnections = 30
|
||||
db.maxwait = 5000
|
||||
db.maxidle = 8
|
||||
db.statementpool = true
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>And idle connections:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep cgspace | grep -c idle
|
||||
49
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Perhaps I need to start drastically increasing the connection limits—like to 300—to see if DSpace&rsquo;s thirst can ever be quenched</li>
|
||||
<li>On another note, SUNScholar&rsquo;s notes suggest adjusting some other postgres variables: <a href="http://wiki.lib.sun.ac.za/index.php/SUNScholar/Optimisations/Database">http://wiki.lib.sun.ac.za/index.php/SUNScholar/Optimisations/Database</a></li>
|
||||
<li>This might help with REST API speed (which I mentioned above and still need to do real tests)</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
|
@ -13,7 +13,7 @@
|
||||
|
||||
|
||||
|
||||
<meta property="og:updated_time" content="2016-03-02T16:50:00+03:00"/>
|
||||
<meta property="og:updated_time" content="2016-04-04T11:06:00+03:00"/>
|
||||
|
||||
|
||||
|
||||
@ -43,7 +43,7 @@
|
||||
},
|
||||
|
||||
|
||||
"dateModified": "2016-03-02T16:50:00+03:00",
|
||||
"dateModified": "2016-04-04T11:06:00+03:00",
|
||||
|
||||
|
||||
|
||||
@ -105,6 +105,32 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-04/">April, 2016</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2016-04-04T11:06:00+03:00">Mon Apr 04, 2016</time> by Alan Orth in
|
||||
|
||||
<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2016-04-04">2016-04-04</h2>
|
||||
|
||||
<ul>
|
||||
<li>Looking at log file use on CGSpace and notice that we need to work on our cron setup a bit</li>
|
||||
<li>We are backing up all logs in the log folder, including useless stuff like solr, cocoon, handle-plugin, etc</li>
|
||||
<li>After running DSpace for over five years I’ve never needed to look in any other log file than dspace.log, leave alone one from last year!</li>
|
||||
<li>This will save us a few gigs of backup space we’re paying for on S3</li>
|
||||
<li>Also, I noticed the <code>checker</code> log has some errors we should pay attention to:</li>
|
||||
</ul>
|
||||
|
||||
<p></p>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2016-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-03/">March, 2016</a></h2>
|
||||
@ -265,6 +291,8 @@
|
||||
<h4>Recent Posts</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
|
||||
@ -273,8 +301,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -13,7 +13,7 @@
|
||||
|
||||
|
||||
|
||||
<meta property="og:updated_time" content="2017-01-02T10:43:00+03:00"/>
|
||||
<meta property="og:updated_time" content="2017-02-07T07:04:52-08:00"/>
|
||||
|
||||
|
||||
|
||||
@ -43,7 +43,7 @@
|
||||
},
|
||||
|
||||
|
||||
"dateModified": "2017-01-02T10:43:00+03:00",
|
||||
"dateModified": "2017-02-07T07:04:52-08:00",
|
||||
|
||||
|
||||
|
||||
@ -105,6 +105,39 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-02/">February, 2017</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2017-02-07T07:04:52-08:00">Tue Feb 07, 2017</time> by Alan Orth in
|
||||
|
||||
<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2017-02-07">2017-02-07</h2>
|
||||
|
||||
<ul>
|
||||
<li>An item was mapped twice erroneously again, so I had to remove one of the mappings manually:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>dspace=# select * from collection2item where item_id = '80278';
|
||||
id | collection_id | item_id
|
||||
-------+---------------+---------
|
||||
92551 | 313 | 80278
|
||||
92550 | 313 | 80278
|
||||
90774 | 1051 | 80278
|
||||
(3 rows)
|
||||
dspace=# delete from collection2item where id = 92551 and item_id = 80278;
|
||||
DELETE 1
|
||||
</code></pre>
|
||||
|
||||
<p></p>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2017-02/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-01/">January, 2017</a></h2>
|
||||
@ -371,32 +404,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-04/">April, 2016</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2016-04-04T11:06:00+03:00">Mon Apr 04, 2016</time> by Alan Orth in
|
||||
|
||||
<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2016-04-04">2016-04-04</h2>
|
||||
|
||||
<ul>
|
||||
<li>Looking at log file use on CGSpace and notice that we need to work on our cron setup a bit</li>
|
||||
<li>We are backing up all logs in the log folder, including useless stuff like solr, cocoon, handle-plugin, etc</li>
|
||||
<li>After running DSpace for over five years I’ve never needed to look in any other log file than dspace.log, leave alone one from last year!</li>
|
||||
<li>This will save us a few gigs of backup space we’re paying for on S3</li>
|
||||
<li>Also, I noticed the <code>checker</code> log has some errors we should pay attention to:</li>
|
||||
</ul>
|
||||
|
||||
<p></p>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2016-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
|
||||
@ -421,6 +428,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
<h4>Recent Posts</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
|
||||
@ -429,8 +438,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -6,9 +6,35 @@
|
||||
<description>Recent content in Posts on CGSpace Notes</description>
|
||||
<generator>Hugo -- gohugo.io</generator>
|
||||
<language>en-us</language>
|
||||
<lastBuildDate>Mon, 02 Jan 2017 10:43:00 +0300</lastBuildDate>
|
||||
<lastBuildDate>Tue, 07 Feb 2017 07:04:52 -0800</lastBuildDate>
|
||||
<atom:link href="https://alanorth.github.io/cgspace-notes/post/index.xml" rel="self" type="application/rss+xml" />
|
||||
|
||||
<item>
|
||||
<title>February, 2017</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2017-02/</link>
|
||||
<pubDate>Tue, 07 Feb 2017 07:04:52 -0800</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2017-02/</guid>
|
||||
<description><h2 id="2017-02-07">2017-02-07</h2>
|
||||
|
||||
<ul>
|
||||
<li>An item was mapped twice erroneously again, so I had to remove one of the mappings manually:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>dspace=# select * from collection2item where item_id = '80278';
|
||||
id | collection_id | item_id
|
||||
-------+---------------+---------
|
||||
92551 | 313 | 80278
|
||||
92550 | 313 | 80278
|
||||
90774 | 1051 | 80278
|
||||
(3 rows)
|
||||
dspace=# delete from collection2item where id = 92551 and item_id = 80278;
|
||||
DELETE 1
|
||||
</code></pre>
|
||||
|
||||
<p></p></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>January, 2017</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2017-01/</link>
|
||||
@ -5168,160 +5194,6 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
|
||||
<ul>
|
||||
<li>Switch CGSpace log compression cron jobs from using lzop to xz—the compression isn&rsquo;t as good, but it&rsquo;s much faster and causes less IO/CPU load</li>
|
||||
<li>Since we figured out (and fixed) the cause of the performance issue, I reverted Google Bot&rsquo;s crawl rate to the &ldquo;Let Google optimize&rdquo; setting</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>November, 2015</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2015-11/</link>
|
||||
<pubDate>Mon, 23 Nov 2015 17:00:57 +0300</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2015-11/</guid>
|
||||
<description><h2 id="2015-11-22">2015-11-22</h2>
|
||||
|
||||
<ul>
|
||||
<li>CGSpace went down</li>
|
||||
<li>Looks like DSpace exhausted its PostgreSQL connection pool</li>
|
||||
<li>Last week I had increased the limit from 30 to 60, which seemed to help, but now there are many more idle connections:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
78
|
||||
</code></pre>
|
||||
|
||||
<p></p>
|
||||
|
||||
<ul>
|
||||
<li>For now I have increased the limit from 60 to 90, run updates, and rebooted the server</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-24">2015-11-24</h2>
|
||||
|
||||
<ul>
|
||||
<li>CGSpace went down again</li>
|
||||
<li>Getting emails from uptimeRobot and uptimeButler that it&rsquo;s down, and Google Webmaster Tools is sending emails that there is an increase in crawl errors</li>
|
||||
<li>Looks like there are still a bunch of idle PostgreSQL connections:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
96
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>For some reason the number of idle connections is very high since we upgraded to DSpace 5</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-25">2015-11-25</h2>
|
||||
|
||||
<ul>
|
||||
<li>Troubleshoot the DSpace 5 OAI breakage caused by nginx routing config</li>
|
||||
<li>The OAI application requests stylesheets and javascript files with the path <code>/oai/static/css</code>, which gets matched here:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code># static assets we can load from the file system directly with nginx
|
||||
location ~ /(themes|static|aspects/ReportingSuite) {
|
||||
try_files $uri @tomcat;
|
||||
...
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>The document root is relative to the xmlui app, so this gets a 404—I&rsquo;m not sure why it doesn&rsquo;t pass to <code>@tomcat</code></li>
|
||||
<li>Anyways, I can&rsquo;t find any URIs with path <code>/static</code>, and the more important point is to handle all the static theme assets, so we can just remove <code>static</code> from the regex for now (who cares if we can&rsquo;t use nginx to send Etags for OAI CSS!)</li>
|
||||
<li>Also, I noticed we aren&rsquo;t setting CSP headers on the static assets, because in nginx headers are inherited in child blocks, but if you use <code>add_header</code> in a child block it doesn&rsquo;t inherit the others</li>
|
||||
<li>We simply need to add <code>include extra-security.conf;</code> to the above location block (but research and test first)</li>
|
||||
<li>We should add WOFF assets to the list of things to set expires for:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>location ~* \.(?:ico|css|js|gif|jpe?g|png|woff)$ {
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>We should also add <code>aspects/Statistics</code> to the location block for static assets (minus <code>static</code> from above):</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>location ~ /(themes|aspects/ReportingSuite|aspects/Statistics) {
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Need to check <code>/about</code> on CGSpace, as it&rsquo;s blank on my local test server and we might need to add something there</li>
|
||||
<li>CGSpace has been up and down all day due to PostgreSQL idle connections (current DSpace pool is 90):</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
93
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>I looked closer at the idle connections and saw that many have been idle for hours (current time on server is <code>2015-11-25T20:20:42+0000</code>):</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | less -S
|
||||
datid | datname | pid | usesysid | usename | application_name | client_addr | client_hostname | client_port | backend_start | xact_start |
|
||||
-------+----------+-------+----------+----------+------------------+-------------+-----------------+-------------+-------------------------------+-------------------------------+---
|
||||
20951 | cgspace | 10966 | 18205 | cgspace | | 127.0.0.1 | | 37731 | 2015-11-25 13:13:02.837624+00 | | 20
|
||||
20951 | cgspace | 10967 | 18205 | cgspace | | 127.0.0.1 | | 37737 | 2015-11-25 13:13:03.069421+00 | | 20
|
||||
...
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>There is a relevant Jira issue about this: <a href="https://jira.duraspace.org/browse/DS-1458">https://jira.duraspace.org/browse/DS-1458</a></li>
|
||||
<li>It seems there is some sense changing DSpace&rsquo;s default <code>db.maxidle</code> from unlimited (-1) to something like 8 (Tomcat default) or 10 (Confluence default)</li>
|
||||
<li>Change <code>db.maxidle</code> from -1 to 10, reduce <code>db.maxconnections</code> from 90 to 50, and restart postgres and tomcat7</li>
|
||||
<li>Also redeploy DSpace Test with a clean sync of CGSpace and mirror these database settings there as well</li>
|
||||
<li>Also deploy the nginx fixes for the <code>try_files</code> location block as well as the expires block</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-26">2015-11-26</h2>
|
||||
|
||||
<ul>
|
||||
<li>CGSpace behaving much better since changing <code>db.maxidle</code> yesterday, but still two up/down notices from monitoring this morning (better than 50!)</li>
|
||||
<li>CCAFS colleagues mentioned that the REST API is very slow, 24 seconds for one item</li>
|
||||
<li>Not as bad for me, but still unsustainable if you have to get many:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle/10568/32802?expand=all
|
||||
8.415
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Monitoring e-mailed in the evening to say CGSpace was down</li>
|
||||
<li>Idle connections in PostgreSQL again:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep cgspace | grep -c idle
|
||||
66
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>At the time, the current DSpace pool size was 50&hellip;</li>
|
||||
<li>I reduced the pool back to the default of 30, and reduced the <code>db.maxidle</code> settings from 10 to 8</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-29">2015-11-29</h2>
|
||||
|
||||
<ul>
|
||||
<li>Still more alerts that CGSpace has been up and down all day</li>
|
||||
<li>Current database settings for DSpace:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>db.maxconnections = 30
|
||||
db.maxwait = 5000
|
||||
db.maxidle = 8
|
||||
db.statementpool = true
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>And idle connections:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep cgspace | grep -c idle
|
||||
49
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Perhaps I need to start drastically increasing the connection limits—like to 300—to see if DSpace&rsquo;s thirst can ever be quenched</li>
|
||||
<li>On another note, SUNScholar&rsquo;s notes suggest adjusting some other postgres variables: <a href="http://wiki.lib.sun.ac.za/index.php/SUNScholar/Optimisations/Database">http://wiki.lib.sun.ac.za/index.php/SUNScholar/Optimisations/Database</a></li>
|
||||
<li>This might help with REST API speed (which I mentioned above and still need to do real tests)</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
|
@ -13,7 +13,7 @@
|
||||
|
||||
|
||||
|
||||
<meta property="og:updated_time" content="2016-03-02T16:50:00+03:00"/>
|
||||
<meta property="og:updated_time" content="2016-04-04T11:06:00+03:00"/>
|
||||
|
||||
|
||||
|
||||
@ -43,7 +43,7 @@
|
||||
},
|
||||
|
||||
|
||||
"dateModified": "2016-03-02T16:50:00+03:00",
|
||||
"dateModified": "2016-04-04T11:06:00+03:00",
|
||||
|
||||
|
||||
|
||||
@ -105,6 +105,32 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-04/">April, 2016</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2016-04-04T11:06:00+03:00">Mon Apr 04, 2016</time> by Alan Orth in
|
||||
|
||||
<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2016-04-04">2016-04-04</h2>
|
||||
|
||||
<ul>
|
||||
<li>Looking at log file use on CGSpace and notice that we need to work on our cron setup a bit</li>
|
||||
<li>We are backing up all logs in the log folder, including useless stuff like solr, cocoon, handle-plugin, etc</li>
|
||||
<li>After running DSpace for over five years I’ve never needed to look in any other log file than dspace.log, leave alone one from last year!</li>
|
||||
<li>This will save us a few gigs of backup space we’re paying for on S3</li>
|
||||
<li>Also, I noticed the <code>checker</code> log has some errors we should pay attention to:</li>
|
||||
</ul>
|
||||
|
||||
<p></p>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2016-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-03/">March, 2016</a></h2>
|
||||
@ -265,6 +291,8 @@
|
||||
<h4>Recent Posts</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
|
||||
@ -273,8 +301,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -1,6 +1,7 @@
|
||||
User-agent: *
|
||||
|
||||
|
||||
Disallow: /cgspace-notes/2017-02/
|
||||
Disallow: /cgspace-notes/2017-01/
|
||||
Disallow: /cgspace-notes/2016-12/
|
||||
Disallow: /cgspace-notes/2016-11/
|
||||
|
@ -1,6 +1,11 @@
|
||||
<?xml version="1.0" encoding="utf-8" standalone="yes" ?>
|
||||
<urlset xmlns="http://www.sitemaps.org/schemas/sitemap/0.9">
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2017-02/</loc>
|
||||
<lastmod>2017-02-07T07:04:52-08:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2017-01/</loc>
|
||||
<lastmod>2017-01-02T10:43:00+03:00</lastmod>
|
||||
@ -78,19 +83,19 @@
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/</loc>
|
||||
<lastmod>2017-01-02T10:43:00+03:00</lastmod>
|
||||
<lastmod>2017-02-07T07:04:52-08:00</lastmod>
|
||||
<priority>0</priority>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
|
||||
<lastmod>2017-01-02T10:43:00+03:00</lastmod>
|
||||
<lastmod>2017-02-07T07:04:52-08:00</lastmod>
|
||||
<priority>0</priority>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/post/</loc>
|
||||
<lastmod>2017-01-02T10:43:00+03:00</lastmod>
|
||||
<lastmod>2017-02-07T07:04:52-08:00</lastmod>
|
||||
<priority>0</priority>
|
||||
</url>
|
||||
|
||||
|
@ -13,7 +13,7 @@
|
||||
|
||||
|
||||
|
||||
<meta property="og:updated_time" content="2017-01-02T10:43:00+03:00"/>
|
||||
<meta property="og:updated_time" content="2017-02-07T07:04:52-08:00"/>
|
||||
|
||||
|
||||
|
||||
@ -43,7 +43,7 @@
|
||||
},
|
||||
|
||||
|
||||
"dateModified": "2017-01-02T10:43:00+03:00",
|
||||
"dateModified": "2017-02-07T07:04:52-08:00",
|
||||
|
||||
|
||||
|
||||
@ -105,6 +105,39 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-02/">February, 2017</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2017-02-07T07:04:52-08:00">Tue Feb 07, 2017</time> by Alan Orth in
|
||||
|
||||
<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2017-02-07">2017-02-07</h2>
|
||||
|
||||
<ul>
|
||||
<li>An item was mapped twice erroneously again, so I had to remove one of the mappings manually:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>dspace=# select * from collection2item where item_id = '80278';
|
||||
id | collection_id | item_id
|
||||
-------+---------------+---------
|
||||
92551 | 313 | 80278
|
||||
92550 | 313 | 80278
|
||||
90774 | 1051 | 80278
|
||||
(3 rows)
|
||||
dspace=# delete from collection2item where id = 92551 and item_id = 80278;
|
||||
DELETE 1
|
||||
</code></pre>
|
||||
|
||||
<p></p>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2017-02/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-01/">January, 2017</a></h2>
|
||||
@ -371,32 +404,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-04/">April, 2016</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2016-04-04T11:06:00+03:00">Mon Apr 04, 2016</time> by Alan Orth in
|
||||
|
||||
<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2016-04-04">2016-04-04</h2>
|
||||
|
||||
<ul>
|
||||
<li>Looking at log file use on CGSpace and notice that we need to work on our cron setup a bit</li>
|
||||
<li>We are backing up all logs in the log folder, including useless stuff like solr, cocoon, handle-plugin, etc</li>
|
||||
<li>After running DSpace for over five years I’ve never needed to look in any other log file than dspace.log, leave alone one from last year!</li>
|
||||
<li>This will save us a few gigs of backup space we’re paying for on S3</li>
|
||||
<li>Also, I noticed the <code>checker</code> log has some errors we should pay attention to:</li>
|
||||
</ul>
|
||||
|
||||
<p></p>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2016-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
|
||||
@ -421,6 +428,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
<h4>Recent Posts</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
|
||||
@ -429,8 +438,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -8,6 +8,32 @@
|
||||
<language>en-us</language>
|
||||
<atom:link href="https://alanorth.github.io/cgspace-notes/tags/notes/index.xml" rel="self" type="application/rss+xml" />
|
||||
|
||||
<item>
|
||||
<title>February, 2017</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2017-02/</link>
|
||||
<pubDate>Tue, 07 Feb 2017 07:04:52 -0800</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2017-02/</guid>
|
||||
<description><h2 id="2017-02-07">2017-02-07</h2>
|
||||
|
||||
<ul>
|
||||
<li>An item was mapped twice erroneously again, so I had to remove one of the mappings manually:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>dspace=# select * from collection2item where item_id = '80278';
|
||||
id | collection_id | item_id
|
||||
-------+---------------+---------
|
||||
92551 | 313 | 80278
|
||||
92550 | 313 | 80278
|
||||
90774 | 1051 | 80278
|
||||
(3 rows)
|
||||
dspace=# delete from collection2item where id = 92551 and item_id = 80278;
|
||||
DELETE 1
|
||||
</code></pre>
|
||||
|
||||
<p></p></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>January, 2017</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2017-01/</link>
|
||||
@ -5167,160 +5193,6 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
|
||||
<ul>
|
||||
<li>Switch CGSpace log compression cron jobs from using lzop to xz—the compression isn&rsquo;t as good, but it&rsquo;s much faster and causes less IO/CPU load</li>
|
||||
<li>Since we figured out (and fixed) the cause of the performance issue, I reverted Google Bot&rsquo;s crawl rate to the &ldquo;Let Google optimize&rdquo; setting</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>November, 2015</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2015-11/</link>
|
||||
<pubDate>Mon, 23 Nov 2015 17:00:57 +0300</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2015-11/</guid>
|
||||
<description><h2 id="2015-11-22">2015-11-22</h2>
|
||||
|
||||
<ul>
|
||||
<li>CGSpace went down</li>
|
||||
<li>Looks like DSpace exhausted its PostgreSQL connection pool</li>
|
||||
<li>Last week I had increased the limit from 30 to 60, which seemed to help, but now there are many more idle connections:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
78
|
||||
</code></pre>
|
||||
|
||||
<p></p>
|
||||
|
||||
<ul>
|
||||
<li>For now I have increased the limit from 60 to 90, run updates, and rebooted the server</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-24">2015-11-24</h2>
|
||||
|
||||
<ul>
|
||||
<li>CGSpace went down again</li>
|
||||
<li>Getting emails from uptimeRobot and uptimeButler that it&rsquo;s down, and Google Webmaster Tools is sending emails that there is an increase in crawl errors</li>
|
||||
<li>Looks like there are still a bunch of idle PostgreSQL connections:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
96
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>For some reason the number of idle connections is very high since we upgraded to DSpace 5</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-25">2015-11-25</h2>
|
||||
|
||||
<ul>
|
||||
<li>Troubleshoot the DSpace 5 OAI breakage caused by nginx routing config</li>
|
||||
<li>The OAI application requests stylesheets and javascript files with the path <code>/oai/static/css</code>, which gets matched here:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code># static assets we can load from the file system directly with nginx
|
||||
location ~ /(themes|static|aspects/ReportingSuite) {
|
||||
try_files $uri @tomcat;
|
||||
...
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>The document root is relative to the xmlui app, so this gets a 404—I&rsquo;m not sure why it doesn&rsquo;t pass to <code>@tomcat</code></li>
|
||||
<li>Anyways, I can&rsquo;t find any URIs with path <code>/static</code>, and the more important point is to handle all the static theme assets, so we can just remove <code>static</code> from the regex for now (who cares if we can&rsquo;t use nginx to send Etags for OAI CSS!)</li>
|
||||
<li>Also, I noticed we aren&rsquo;t setting CSP headers on the static assets, because in nginx headers are inherited in child blocks, but if you use <code>add_header</code> in a child block it doesn&rsquo;t inherit the others</li>
|
||||
<li>We simply need to add <code>include extra-security.conf;</code> to the above location block (but research and test first)</li>
|
||||
<li>We should add WOFF assets to the list of things to set expires for:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>location ~* \.(?:ico|css|js|gif|jpe?g|png|woff)$ {
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>We should also add <code>aspects/Statistics</code> to the location block for static assets (minus <code>static</code> from above):</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>location ~ /(themes|aspects/ReportingSuite|aspects/Statistics) {
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Need to check <code>/about</code> on CGSpace, as it&rsquo;s blank on my local test server and we might need to add something there</li>
|
||||
<li>CGSpace has been up and down all day due to PostgreSQL idle connections (current DSpace pool is 90):</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
93
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>I looked closer at the idle connections and saw that many have been idle for hours (current time on server is <code>2015-11-25T20:20:42+0000</code>):</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | less -S
|
||||
datid | datname | pid | usesysid | usename | application_name | client_addr | client_hostname | client_port | backend_start | xact_start |
|
||||
-------+----------+-------+----------+----------+------------------+-------------+-----------------+-------------+-------------------------------+-------------------------------+---
|
||||
20951 | cgspace | 10966 | 18205 | cgspace | | 127.0.0.1 | | 37731 | 2015-11-25 13:13:02.837624+00 | | 20
|
||||
20951 | cgspace | 10967 | 18205 | cgspace | | 127.0.0.1 | | 37737 | 2015-11-25 13:13:03.069421+00 | | 20
|
||||
...
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>There is a relevant Jira issue about this: <a href="https://jira.duraspace.org/browse/DS-1458">https://jira.duraspace.org/browse/DS-1458</a></li>
|
||||
<li>It seems there is some sense changing DSpace&rsquo;s default <code>db.maxidle</code> from unlimited (-1) to something like 8 (Tomcat default) or 10 (Confluence default)</li>
|
||||
<li>Change <code>db.maxidle</code> from -1 to 10, reduce <code>db.maxconnections</code> from 90 to 50, and restart postgres and tomcat7</li>
|
||||
<li>Also redeploy DSpace Test with a clean sync of CGSpace and mirror these database settings there as well</li>
|
||||
<li>Also deploy the nginx fixes for the <code>try_files</code> location block as well as the expires block</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-26">2015-11-26</h2>
|
||||
|
||||
<ul>
|
||||
<li>CGSpace behaving much better since changing <code>db.maxidle</code> yesterday, but still two up/down notices from monitoring this morning (better than 50!)</li>
|
||||
<li>CCAFS colleagues mentioned that the REST API is very slow, 24 seconds for one item</li>
|
||||
<li>Not as bad for me, but still unsustainable if you have to get many:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle/10568/32802?expand=all
|
||||
8.415
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Monitoring e-mailed in the evening to say CGSpace was down</li>
|
||||
<li>Idle connections in PostgreSQL again:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep cgspace | grep -c idle
|
||||
66
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>At the time, the current DSpace pool size was 50&hellip;</li>
|
||||
<li>I reduced the pool back to the default of 30, and reduced the <code>db.maxidle</code> settings from 10 to 8</li>
|
||||
</ul>
|
||||
|
||||
<h2 id="2015-11-29">2015-11-29</h2>
|
||||
|
||||
<ul>
|
||||
<li>Still more alerts that CGSpace has been up and down all day</li>
|
||||
<li>Current database settings for DSpace:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>db.maxconnections = 30
|
||||
db.maxwait = 5000
|
||||
db.maxidle = 8
|
||||
db.statementpool = true
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>And idle connections:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep cgspace | grep -c idle
|
||||
49
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Perhaps I need to start drastically increasing the connection limits—like to 300—to see if DSpace&rsquo;s thirst can ever be quenched</li>
|
||||
<li>On another note, SUNScholar&rsquo;s notes suggest adjusting some other postgres variables: <a href="http://wiki.lib.sun.ac.za/index.php/SUNScholar/Optimisations/Database">http://wiki.lib.sun.ac.za/index.php/SUNScholar/Optimisations/Database</a></li>
|
||||
<li>This might help with REST API speed (which I mentioned above and still need to do real tests)</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
|
@ -13,7 +13,7 @@
|
||||
|
||||
|
||||
|
||||
<meta property="og:updated_time" content="2016-03-02T16:50:00+03:00"/>
|
||||
<meta property="og:updated_time" content="2016-04-04T11:06:00+03:00"/>
|
||||
|
||||
|
||||
|
||||
@ -43,7 +43,7 @@
|
||||
},
|
||||
|
||||
|
||||
"dateModified": "2016-03-02T16:50:00+03:00",
|
||||
"dateModified": "2016-04-04T11:06:00+03:00",
|
||||
|
||||
|
||||
|
||||
@ -105,6 +105,32 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-04/">April, 2016</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2016-04-04T11:06:00+03:00">Mon Apr 04, 2016</time> by Alan Orth in
|
||||
|
||||
<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2016-04-04">2016-04-04</h2>
|
||||
|
||||
<ul>
|
||||
<li>Looking at log file use on CGSpace and notice that we need to work on our cron setup a bit</li>
|
||||
<li>We are backing up all logs in the log folder, including useless stuff like solr, cocoon, handle-plugin, etc</li>
|
||||
<li>After running DSpace for over five years I’ve never needed to look in any other log file than dspace.log, leave alone one from last year!</li>
|
||||
<li>This will save us a few gigs of backup space we’re paying for on S3</li>
|
||||
<li>Also, I noticed the <code>checker</code> log has some errors we should pay attention to:</li>
|
||||
</ul>
|
||||
|
||||
<p></p>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2016-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-03/">March, 2016</a></h2>
|
||||
@ -265,6 +291,8 @@
|
||||
<h4>Recent Posts</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
|
||||
@ -273,8 +301,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2016-10/">October, 2016</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2016-09/">September, 2016</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
Loading…
Reference in New Issue
Block a user