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Add notes for 2022-09-22

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Alan Orth 2022-09-22 21:59:15 +03:00
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content/posts/2022-09.md
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@ -263,4 +263,52 @@ COMMIT
- For now I guess requests that were done two or three times by different clients will be cached and that's a win, and I expect more and more REST API activity soon when initiatives and One CGIAR stuff picks up
## 2022-09-20
- I checked the status of the nginx REST API cache on CGSpace and it was stuck at 7,083 items for hours:
```console
# find /var/cache/nginx/rest_cache/ -type f | wc -l
7083
```
- The proxy cache key zone is currently 1m, which can store ~8,000 keys, so that could be what we're running into
- I increased it to 2m and will keep monitoring it
- CIP webmaster contacted me to say they are having problems harvesting CGSpace from their WordPress
- I am not sure if there are issues due to the REST API caching I enabled...
## 2022-09-21
- Planning the Nairobi DSpace Users meeting with Abenet
- Planning to have a call about MEL submitting to CGSpace on Monday with Mohammed Salem
- I created two collections on DSpace Test: one with a workflow, and one without
- According to my notes from [2020-10]({{< relref "2020-10.md" >}}) the account must be in the admin group in order to submit via the REST API, so I added it to the admin group of each collection
## 2022-09-22
- Nairobi DSpace users meeting at ILRI
- I found a few users that didn't have ORCID iDs and were missing tags on CGSpace so I tagged them:
```console
$ cat 2022-09-22-add-orcids.csv
dc.contributor.author,cg.creator.identifier
"Alonso, Silvia","Silvia Alonso: 0000-0002-0565-536X"
"Goopy, John P.","John Goopy: 0000-0001-7177-1310"
"Korir, Daniel","Daniel Korir: 0000-0002-1356-8039"
"Leitner, Sonja","Sonja Leitner: 0000-0002-1276-8071"
"Fèvre, Eric M.","Eric M. Fèvre: 0000-0001-8931-4986"
"Galiè, Alessandra","Alessandra Galie: 0000-0001-9868-7733"
"Baltenweck, Isabelle","Isabelle Baltenweck: 0000-0002-4147-5921"
"Robinson, Timothy P.","Timothy Robinson: 0000-0002-4266-963X"
"Lannerstad, Mats","Mats Lannerstad: 0000-0002-5116-3198"
"Graham, Michael","Michael Graham: 0000-0002-1189-8640"
"Merbold, Lutz","Lutz Merbold: 0000-0003-4974-170X"
"Rufino, Mariana C.","Mariana Rufino: 0000-0003-4293-3290"
"Wilkes, Andreas","Andreas Wilkes: 0000-0001-7546-991X"
$ ./ilri/add-orcid-identifiers-csv.py -i /tmp/2022-09-22-add-orcids.csv -db dspace -u dspace -p 'fuuu'
```
- This adds almost 800 ORCID tags!
- Some of these authors were not in the controlled vocabulary so I added them
<!-- vim: set sw=2 ts=2: -->

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@ -25,7 +25,7 @@ I also fixed a few bugs and improved the region-matching logic
<meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2022-09/" />
<meta property="article:published_time" content="2022-09-01T09:41:36+03:00" />
<meta property="article:modified_time" content="2022-09-18T21:04:01+03:00" />
<meta property="article:modified_time" content="2022-09-19T15:58:41+03:00" />
@ -56,9 +56,9 @@ I also fixed a few bugs and improved the region-matching logic
"@type": "BlogPosting",
"headline": "September, 2022",
"url": "https://alanorth.github.io/cgspace-notes/2022-09/",
"wordCount": "1660",
"wordCount": "1942",
"datePublished": "2022-09-01T09:41:36+03:00",
"dateModified": "2022-09-18T21:04:01+03:00",
"dateModified": "2022-09-19T15:58:41+03:00",
"author": {
"@type": "Person",
"name": "Alan Orth"
@ -423,6 +423,62 @@ I also fixed a few bugs and improved the region-matching logic
</span></span></code></pre></div><ul>
<li>For now I guess requests that were done two or three times by different clients will be cached and that&rsquo;s a win, and I expect more and more REST API activity soon when initiatives and One CGIAR stuff picks up</li>
</ul>
<h2 id="2022-09-20">2022-09-20</h2>
<ul>
<li>I checked the status of the nginx REST API cache on CGSpace and it was stuck at 7,083 items for hours:</li>
</ul>
<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span># find /var/cache/nginx/rest_cache/ -type f | wc -l
</span></span><span style="display:flex;"><span>7083
</span></span></code></pre></div><ul>
<li>The proxy cache key zone is currently 1m, which can store ~8,000 keys, so that could be what we&rsquo;re running into
<ul>
<li>I increased it to 2m and will keep monitoring it</li>
</ul>
</li>
<li>CIP webmaster contacted me to say they are having problems harvesting CGSpace from their WordPress
<ul>
<li>I am not sure if there are issues due to the REST API caching I enabled&hellip;</li>
</ul>
</li>
</ul>
<h2 id="2022-09-21">2022-09-21</h2>
<ul>
<li>Planning the Nairobi DSpace Users meeting with Abenet</li>
<li>Planning to have a call about MEL submitting to CGSpace on Monday with Mohammed Salem
<ul>
<li>I created two collections on DSpace Test: one with a workflow, and one without</li>
<li>According to my notes from <a href="/cgspace-notes/2020-10/">2020-10</a> the account must be in the admin group in order to submit via the REST API, so I added it to the admin group of each collection</li>
</ul>
</li>
</ul>
<h2 id="2022-09-22">2022-09-22</h2>
<ul>
<li>Nairobi DSpace users meeting at ILRI</li>
<li>I found a few users that didn&rsquo;t have ORCID iDs and were missing tags on CGSpace so I tagged them:</li>
</ul>
<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span>$ cat 2022-09-22-add-orcids.csv
</span></span><span style="display:flex;"><span>dc.contributor.author,cg.creator.identifier
</span></span><span style="display:flex;"><span>&#34;Alonso, Silvia&#34;,&#34;Silvia Alonso: 0000-0002-0565-536X&#34;
</span></span><span style="display:flex;"><span>&#34;Goopy, John P.&#34;,&#34;John Goopy: 0000-0001-7177-1310&#34;
</span></span><span style="display:flex;"><span>&#34;Korir, Daniel&#34;,&#34;Daniel Korir: 0000-0002-1356-8039&#34;
</span></span><span style="display:flex;"><span>&#34;Leitner, Sonja&#34;,&#34;Sonja Leitner: 0000-0002-1276-8071&#34;
</span></span><span style="display:flex;"><span>&#34;Fèvre, Eric M.&#34;,&#34;Eric M. Fèvre: 0000-0001-8931-4986&#34;
</span></span><span style="display:flex;"><span>&#34;Galiè, Alessandra&#34;,&#34;Alessandra Galie: 0000-0001-9868-7733&#34;
</span></span><span style="display:flex;"><span>&#34;Baltenweck, Isabelle&#34;,&#34;Isabelle Baltenweck: 0000-0002-4147-5921&#34;
</span></span><span style="display:flex;"><span>&#34;Robinson, Timothy P.&#34;,&#34;Timothy Robinson: 0000-0002-4266-963X&#34;
</span></span><span style="display:flex;"><span>&#34;Lannerstad, Mats&#34;,&#34;Mats Lannerstad: 0000-0002-5116-3198&#34;
</span></span><span style="display:flex;"><span>&#34;Graham, Michael&#34;,&#34;Michael Graham: 0000-0002-1189-8640&#34;
</span></span><span style="display:flex;"><span>&#34;Merbold, Lutz&#34;,&#34;Lutz Merbold: 0000-0003-4974-170X&#34;
</span></span><span style="display:flex;"><span>&#34;Rufino, Mariana C.&#34;,&#34;Mariana Rufino: 0000-0003-4293-3290&#34;
</span></span><span style="display:flex;"><span>&#34;Wilkes, Andreas&#34;,&#34;Andreas Wilkes: 0000-0001-7546-991X&#34;
</span></span><span style="display:flex;"><span>$ ./ilri/add-orcid-identifiers-csv.py -i /tmp/2022-09-22-add-orcids.csv -db dspace -u dspace -p <span style="color:#e6db74">&#39;fuuu&#39;</span>
</span></span></code></pre></div><ul>
<li>This adds almost 800 ORCID tags!
<ul>
<li>Some of these authors were not in the controlled vocabulary so I added them</li>
</ul>
</li>
</ul>
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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</url><url>
<loc>https://alanorth.github.io/cgspace-notes/2022-08/</loc>
<lastmod>2022-08-31T17:37:28+03:00</lastmod>