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@ -0,0 +1,15 @@
---
title: "November, 2018"
date: 2018-11-01T16:41:30+02:00
author: "Alan Orth"
tags: ["Notes"]
---
## 2018-11-01
- Finalize AReS Phase I and Phase II ToRs
- Send a note about my [dspace-statistics-api](https://github.com/ilri/dspace-statistics-api) to the dspace-tech mailing list
<!--more-->
<!-- vim: set sw=2 ts=2: -->

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@ -282,6 +282,8 @@ db.statementpool = true
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -290,8 +292,6 @@ db.statementpool = true
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

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@ -299,6 +299,8 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -307,8 +309,6 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

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docs/2016-01/index.html
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@ -214,6 +214,8 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} \; | so
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -222,8 +224,6 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} \; | so
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-02/index.html
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@ -467,6 +467,8 @@ Bitstream: tést señora alimentación.pdf
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -475,8 +477,6 @@ Bitstream: tést señora alimentación.pdf
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

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@ -367,6 +367,8 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -375,8 +377,6 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

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@ -584,6 +584,8 @@ dspace.log.2016-04-27:7271
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -592,8 +594,6 @@ dspace.log.2016-04-27:7271
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

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@ -434,6 +434,8 @@ sys 0m20.540s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -442,8 +444,6 @@ sys 0m20.540s
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

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@ -479,6 +479,8 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -487,8 +489,6 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -397,6 +397,8 @@ discovery.index.authority.ignore-variants=true
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -405,8 +407,6 @@ discovery.index.authority.ignore-variants=true
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

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docs/2016-08/index.html
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@ -470,6 +470,8 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -478,8 +480,6 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

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@ -770,6 +770,8 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -778,8 +780,6 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -455,6 +455,8 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -463,8 +465,6 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -672,6 +672,8 @@ org.dspace.discovery.SearchServiceException: Error executing query
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -680,8 +682,6 @@ org.dspace.discovery.SearchServiceException: Error executing query
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -908,6 +908,8 @@ $ exit
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -916,8 +918,6 @@ $ exit
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-01/index.html
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@ -453,6 +453,8 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -461,8 +463,6 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

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@ -525,6 +525,8 @@ COPY 1968
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -533,8 +535,6 @@ COPY 1968
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -439,6 +439,8 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -447,8 +449,6 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -718,6 +718,8 @@ $ gem install compass -v 1.0.3
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -726,8 +728,6 @@ $ gem install compass -v 1.0.3
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -472,6 +472,8 @@ UPDATE 187
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -480,8 +482,6 @@ UPDATE 187
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -290,6 +290,8 @@ $ JAVA_OPTS=&quot;-Xmx1024m -Dfile.encoding=UTF-8&quot; [dspace]/bin/dspace impo
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -298,8 +300,6 @@ $ JAVA_OPTS=&quot;-Xmx1024m -Dfile.encoding=UTF-8&quot; [dspace]/bin/dspace impo
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -325,6 +325,8 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -333,8 +335,6 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -611,6 +611,8 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -619,8 +621,6 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -783,6 +783,8 @@ Cert Status: good
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -791,8 +793,6 @@ Cert Status: good
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-10/index.html
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@ -548,6 +548,8 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -556,8 +558,6 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-11/index.html
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@ -1192,6 +1192,8 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -1200,8 +1202,6 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-12/index.html
View File

@ -957,6 +957,8 @@ DELETE 20
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -965,8 +967,6 @@ DELETE 20
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-01/index.html
View File

@ -1784,6 +1784,8 @@ Catalina:type=Manager,context=/,host=localhost activeSessions 8
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -1792,8 +1794,6 @@ Catalina:type=Manager,context=/,host=localhost activeSessions 8
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-02/index.html
View File

@ -1303,6 +1303,8 @@ UPDATE 3
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -1311,8 +1313,6 @@ UPDATE 3
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-03/index.html
View File

@ -730,6 +730,8 @@ Fixed 5 occurences of: GENEBANKS
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -738,8 +740,6 @@ Fixed 5 occurences of: GENEBANKS
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-04/index.html
View File

@ -727,6 +727,8 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -735,8 +737,6 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-05/index.html
View File

@ -606,6 +606,8 @@ $ psql -h localhost -U postgres dspacetest
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -614,8 +616,6 @@ $ psql -h localhost -U postgres dspacetest
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-06/index.html
View File

@ -586,6 +586,8 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -594,8 +596,6 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-07/index.html
View File

@ -697,6 +697,8 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -705,8 +707,6 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-08/index.html
View File

@ -533,6 +533,8 @@ $ dspace database migrate ignored
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -541,8 +543,6 @@ $ dspace database migrate ignored
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-09/index.html
View File

@ -911,6 +911,8 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -919,8 +921,6 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

33
docs/2018-10/index.html
View File

@ -6,14 +6,28 @@
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"> <meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
<meta property="og:title" content="October, 2018" /> <meta property="og:title" content="October, 2018" />
<meta property="og:description" content="2018-10-01 Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nairobi right now 2018-10-03 I see Moayad was busy collecting item views and downloads from CGSpace yesterday: # zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Oct/2018&quot; | awk &#39;{print $1} &#39; | sort | uniq -c | sort -n | tail -n 10 933 40." /> <meta property="og:description" content="2018-10-01
Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items
I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nairobi right now
" />
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-10/" /><meta property="article:published_time" content="2018-10-01T22:31:54&#43;03:00"/> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-10/" /><meta property="article:published_time" content="2018-10-01T22:31:54&#43;03:00"/>
<meta property="article:modified_time" content="2018-10-30T14:13:08&#43;02:00"/> <meta property="article:modified_time" content="2018-11-01T16:42:20&#43;02:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="October, 2018"/> <meta name="twitter:title" content="October, 2018"/>
<meta name="twitter:description" content="2018-10-01 Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nairobi right now 2018-10-03 I see Moayad was busy collecting item views and downloads from CGSpace yesterday: # zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Oct/2018&quot; | awk &#39;{print $1} &#39; | sort | uniq -c | sort -n | tail -n 10 933 40."/> <meta name="twitter:description" content="2018-10-01
Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items
I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nairobi right now
"/>
<meta name="generator" content="Hugo 0.50" /> <meta name="generator" content="Hugo 0.50" />
@ -26,7 +40,7 @@
"url": "https://alanorth.github.io/cgspace-notes/2018-10/", "url": "https://alanorth.github.io/cgspace-notes/2018-10/",
"wordCount": "4519", "wordCount": "4519",
"datePublished": "2018-10-01T22:31:54&#43;03:00", "datePublished": "2018-10-01T22:31:54&#43;03:00",
"dateModified": "2018-10-30T14:13:08&#43;02:00", "dateModified": "2018-11-01T16:42:20&#43;02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -92,15 +106,15 @@
</p> </p>
</header> </header>
<h2 id="2018-10-01">2018-10-01</h2>
<h2 id="2018-10-01">2018-10-01</h2>
<ul> <ul>
<li>Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items</li> <li>Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items</li>
<li>I created a GitHub issue to track this <a href="https://github.com/ilri/DSpace/issues/389">#389</a>, because I&rsquo;m super busy in Nairobi right now</li> <li>I created a GitHub issue to track this <a href="https://github.com/ilri/DSpace/issues/389">#389</a>, because I&rsquo;m super busy in Nairobi right now</li>
</ul> </ul>
<p></p>
<h2 id="2018-10-03">2018-10-03</h2> <h2 id="2018-10-03">2018-10-03</h2>
<ul> <ul>
@ -785,7 +799,6 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
</article> </article>
@ -801,6 +814,8 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -809,8 +824,6 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

190
docs/2018-11/index.html Normal file
View File

@ -0,0 +1,190 @@
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
<meta property="og:title" content="November, 2018" />
<meta property="og:description" content="2018-11-01
Finalize AReS Phase I and Phase II ToRs
Send a note about my dspace-statistics-api to the dspace-tech mailing list
" />
<meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-11/" /><meta property="article:published_time" content="2018-11-01T16:41:30&#43;02:00"/>
<meta property="article:modified_time" content="2018-11-01T16:41:30&#43;02:00"/>
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="November, 2018"/>
<meta name="twitter:description" content="2018-11-01
Finalize AReS Phase I and Phase II ToRs
Send a note about my dspace-statistics-api to the dspace-tech mailing list
"/>
<meta name="generator" content="Hugo 0.50" />
<script type="application/ld+json">
{
"@context": "http://schema.org",
"@type": "BlogPosting",
"headline": "November, 2018",
"url": "https://alanorth.github.io/cgspace-notes/2018-11/",
"wordCount": "20",
"datePublished": "2018-11-01T16:41:30&#43;02:00",
"dateModified": "2018-11-01T16:41:30&#43;02:00",
"author": {
"@type": "Person",
"name": "Alan Orth"
},
"keywords": "Notes"
}
</script>
<link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2018-11/">
<title>November, 2018 | CGSpace Notes</title>
<!-- combined, minified CSS -->
<link href="https://alanorth.github.io/cgspace-notes/css/style.css" rel="stylesheet" integrity="sha384-Upm5uY/SXdvbjuIGH6fBjF5vOYUr9DguqBskM&#43;EQpLBzO9U&#43;9fMVmWEt&#43;TTlGrWQ" crossorigin="anonymous">
</head>
<body>
<div class="blog-masthead">
<div class="container">
<nav class="nav blog-nav">
<a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
</nav>
</div>
</div>
<header class="blog-header">
<div class="container">
<h1 class="blog-title"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
<p class="lead blog-description">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
</div>
</header>
<div class="container">
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<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-11-01">2018-11-01</h2>
<ul>
<li>Finalize AReS Phase I and Phase II ToRs</li>
<li>Send a note about my <a href="https://github.com/ilri/dspace-statistics-api">dspace-statistics-api</a> to the dspace-tech mailing list</li>
</ul>
<p></p>
<!-- vim: set sw=2 ts=2: -->
</article>
</div> <!-- /.blog-main -->
<aside class="col-sm-3 ml-auto blog-sidebar">
<section class="sidebar-module">
<h4>Recent Posts</h4>
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
<li><a href="/cgspace-notes/2018-08/">August, 2018</a></li>
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
</ol>
</section>
<section class="sidebar-module">
<h4>Links</h4>
<ol class="list-unstyled">
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
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<footer class="blog-footer">
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4
docs/404.html
View File

@ -85,6 +85,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -93,8 +95,6 @@
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

134
docs/categories/index.html
View File

@ -87,6 +87,31 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-11-01">2018-11-01</h2>
<ul>
<li>Finalize AReS Phase I and Phase II ToRs</li>
<li>Send a note about my <a href="https://github.com/ilri/dspace-statistics-api">dspace-statistics-api</a> to the dspace-tech mailing list</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-11/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
@ -96,7 +121,14 @@
</p> </p>
</header> </header>
2018-10-01 Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nairobi right now 2018-10-03 I see Moayad was busy collecting item views and downloads from CGSpace yesterday: # zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Oct/2018&quot; | awk '{print $1} ' | sort | uniq -c | sort -n | tail -n 10 933 40. <h2 id="2018-10-01">2018-10-01</h2>
<ul>
<li>Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items</li>
<li>I created a GitHub issue to track this <a href="https://github.com/ilri/DSpace/issues/389">#389</a>, because I&rsquo;m super busy in Nairobi right now</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a>
</article> </article>
@ -355,102 +387,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-01-02">2018-01-02</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li>And just before that I see this:</li>
</ul>
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
</code></pre>
<ul>
<li>Ah hah! So the pool was actually empty!</li>
<li>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</li>
<li>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</li>
<li>I notice this error quite a few times in dspace.log:</li>
</ul>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre>
<ul>
<li>And there are many of these errors every day for the past month:</li>
</ul>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre>
<ul>
<li>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -475,6 +411,8 @@ dspace.log.2018-01-02:34
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -483,8 +421,6 @@ dspace.log.2018-01-02:34
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/categories/notes/index.html
View File

@ -107,6 +107,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -115,8 +117,6 @@
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

139
docs/categories/page/2/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2017-12-01T13:53:54&#43;03:00"/> <meta property="og:updated_time" content="2018-01-02T08:35:54-08:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-12-01T13:53:54&#43;03:00", "dateModified": "2018-01-02T08:35:54-08:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,102 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-01-02">2018-01-02</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li>And just before that I see this:</li>
</ul>
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
</code></pre>
<ul>
<li>Ah hah! So the pool was actually empty!</li>
<li>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</li>
<li>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</li>
<li>I notice this error quite a few times in dspace.log:</li>
</ul>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre>
<ul>
<li>And there are many of these errors every day for the past month:</li>
</ul>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre>
<ul>
<li>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
@ -349,41 +445,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52&#43;02:00">Sun Apr 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-04-02">2017-04-02</h2>
<ul>
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (&ldquo;MANAGING CLIMATE RISK&rdquo;): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
</ul>
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
<ul>
<li>Remove redundant/duplicate text in the DSpace submission license</li>
<li>Testing the CMYK patch on a collection with 650 items:</li>
</ul>
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Thumbnail&quot; -v &gt;&amp; /tmp/filter-media-cmyk.txt
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2017-04/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/categories/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/categories/" rel="prev" role="button">Previous page</a>
@ -408,6 +469,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -416,8 +479,6 @@ COPY 54701
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

72
docs/categories/page/3/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2017-03-01T17:08:52&#43;02:00"/> <meta property="og:updated_time" content="2017-04-02T17:08:52&#43;02:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-03-01T17:08:52&#43;02:00", "dateModified": "2017-04-02T17:08:52&#43;02:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,41 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52&#43;02:00">Sun Apr 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-04-02">2017-04-02</h2>
<ul>
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (&ldquo;MANAGING CLIMATE RISK&rdquo;): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
</ul>
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
<ul>
<li>Remove redundant/duplicate text in the DSpace submission license</li>
<li>Testing the CMYK patch on a collection with 650 items:</li>
</ul>
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Thumbnail&quot; -v &gt;&amp; /tmp/filter-media-cmyk.txt
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2017-04/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2>
@ -395,35 +430,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-06-01T10:53:00&#43;03:00">Wed Jun 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-06-01">2016-06-01</h2>
<ul>
<li>Experimenting with IFPRI OAI (we want to harvest their publications)</li>
<li>After reading the <a href="https://www.oclc.org/support/services/contentdm/help/server-admin-help/oai-support.en.html">ContentDM documentation</a> I found IFPRI&rsquo;s OAI endpoint: <a href="http://ebrary.ifpri.org/oai/oai.php">http://ebrary.ifpri.org/oai/oai.php</a></li>
<li>After reading the <a href="https://www.openarchives.org/OAI/openarchivesprotocol.html">OAI documentation</a> and testing with an <a href="http://validator.oaipmh.com/">OAI validator</a> I found out how to get their publications</li>
<li>This is their publications set: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc">http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc</a></li>
<li>You can see the others by using the OAI <code>ListSets</code> verb: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListSets">http://ebrary.ifpri.org/oai/oai.php?verb=ListSets</a></li>
<li>Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in <code>dc.identifier.fund</code> to <code>cg.identifier.cpwfproject</code> and then the rest to <code>dc.description.sponsorship</code></li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-06/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/2/" rel="prev" role="button">Previous page</a>
@ -448,6 +454,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -456,8 +464,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

39
docs/categories/page/4/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2016-05-01T23:06:00&#43;03:00"/> <meta property="og:updated_time" content="2016-06-01T10:53:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2016-05-01T23:06:00&#43;03:00", "dateModified": "2016-06-01T10:53:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-06-01T10:53:00&#43;03:00">Wed Jun 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-06-01">2016-06-01</h2>
<ul>
<li>Experimenting with IFPRI OAI (we want to harvest their publications)</li>
<li>After reading the <a href="https://www.oclc.org/support/services/contentdm/help/server-admin-help/oai-support.en.html">ContentDM documentation</a> I found IFPRI&rsquo;s OAI endpoint: <a href="http://ebrary.ifpri.org/oai/oai.php">http://ebrary.ifpri.org/oai/oai.php</a></li>
<li>After reading the <a href="https://www.openarchives.org/OAI/openarchivesprotocol.html">OAI documentation</a> and testing with an <a href="http://validator.oaipmh.com/">OAI validator</a> I found out how to get their publications</li>
<li>This is their publications set: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc">http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc</a></li>
<li>You can see the others by using the OAI <code>ListSets</code> verb: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListSets">http://ebrary.ifpri.org/oai/oai.php?verb=ListSets</a></li>
<li>Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in <code>dc.identifier.fund</code> to <code>cg.identifier.cpwfproject</code> and then the rest to <code>dc.description.sponsorship</code></li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-06/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2>
@ -296,7 +325,7 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/posts/">Posts</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/posts/">Posts</a></h2>
<p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth</p> <p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth</p>
</header> </header>
<a href='https://alanorth.github.io/cgspace-notes/posts/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/posts/'>Read more →</a>
@ -330,6 +359,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -338,8 +369,6 @@
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/cgiar-library-migration/index.html
View File

@ -325,6 +325,8 @@ dspace=# select setval('handle_seq',86873);
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -333,8 +335,6 @@ dspace=# select setval('handle_seq',86873);
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

138
docs/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2018-10-01T22:31:54&#43;03:00"/> <meta property="og:updated_time" content="2018-11-01T16:41:30&#43;02:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2018-10-01T22:31:54&#43;03:00", "dateModified": "2018-11-01T16:41:30&#43;02:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,31 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-11-01">2018-11-01</h2>
<ul>
<li>Finalize AReS Phase I and Phase II ToRs</li>
<li>Send a note about my <a href="https://github.com/ilri/dspace-statistics-api">dspace-statistics-api</a> to the dspace-tech mailing list</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-11/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
@ -98,7 +123,14 @@
</p> </p>
</header> </header>
2018-10-01 Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nairobi right now 2018-10-03 I see Moayad was busy collecting item views and downloads from CGSpace yesterday: # zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Oct/2018&quot; | awk '{print $1} ' | sort | uniq -c | sort -n | tail -n 10 933 40. <h2 id="2018-10-01">2018-10-01</h2>
<ul>
<li>Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items</li>
<li>I created a GitHub issue to track this <a href="https://github.com/ilri/DSpace/issues/389">#389</a>, because I&rsquo;m super busy in Nairobi right now</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a>
</article> </article>
@ -357,102 +389,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-01-02">2018-01-02</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li>And just before that I see this:</li>
</ul>
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
</code></pre>
<ul>
<li>Ah hah! So the pool was actually empty!</li>
<li>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</li>
<li>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</li>
<li>I notice this error quite a few times in dspace.log:</li>
</ul>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre>
<ul>
<li>And there are many of these errors every day for the past month:</li>
</ul>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre>
<ul>
<li>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -477,6 +413,8 @@ dspace.log.2018-01-02:34
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -485,8 +423,6 @@ dspace.log.2018-01-02:34
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

27
docs/index.xml
View File

@ -6,18 +6,41 @@
<description>Recent content on CGSpace Notes</description> <description>Recent content on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
<lastBuildDate>Mon, 01 Oct 2018 22:31:54 +0300</lastBuildDate> <lastBuildDate>Thu, 01 Nov 2018 16:41:30 +0200</lastBuildDate>
<atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" /> <atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" />
<item>
<title>November, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-11/</link>
<pubDate>Thu, 01 Nov 2018 16:41:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-11/</guid>
<description>&lt;h2 id=&#34;2018-11-01&#34;&gt;2018-11-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Finalize AReS Phase I and Phase II ToRs&lt;/li&gt;
&lt;li&gt;Send a note about my &lt;a href=&#34;https://github.com/ilri/dspace-statistics-api&#34;&gt;dspace-statistics-api&lt;/a&gt; to the dspace-tech mailing list&lt;/li&gt;
&lt;/ul&gt;
&lt;p&gt;&lt;/p&gt;</description>
</item>
<item> <item>
<title>October, 2018</title> <title>October, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-10/</link> <link>https://alanorth.github.io/cgspace-notes/2018-10/</link>
<pubDate>Mon, 01 Oct 2018 22:31:54 +0300</pubDate> <pubDate>Mon, 01 Oct 2018 22:31:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-10/</guid> <guid>https://alanorth.github.io/cgspace-notes/2018-10/</guid>
<description>2018-10-01 Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I&amp;rsquo;m super busy in Nairobi right now 2018-10-03 I see Moayad was busy collecting item views and downloads from CGSpace yesterday: # zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &amp;quot;02/Oct/2018&amp;quot; | awk &#39;{print $1} &#39; | sort | uniq -c | sort -n | tail -n 10 933 40.</description> <description>&lt;h2 id=&#34;2018-10-01&#34;&gt;2018-10-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items&lt;/li&gt;
&lt;li&gt;I created a GitHub issue to track this &lt;a href=&#34;https://github.com/ilri/DSpace/issues/389&#34;&gt;#389&lt;/a&gt;, because I&amp;rsquo;m super busy in Nairobi right now&lt;/li&gt;
&lt;/ul&gt;
&lt;p&gt;&lt;/p&gt;</description>
</item> </item>
<item> <item>

139
docs/page/2/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2017-12-01T13:53:54&#43;03:00"/> <meta property="og:updated_time" content="2018-01-02T08:35:54-08:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-12-01T13:53:54&#43;03:00", "dateModified": "2018-01-02T08:35:54-08:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,102 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-01-02">2018-01-02</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li>And just before that I see this:</li>
</ul>
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
</code></pre>
<ul>
<li>Ah hah! So the pool was actually empty!</li>
<li>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</li>
<li>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</li>
<li>I notice this error quite a few times in dspace.log:</li>
</ul>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre>
<ul>
<li>And there are many of these errors every day for the past month:</li>
</ul>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre>
<ul>
<li>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
@ -349,41 +445,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52&#43;02:00">Sun Apr 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-04-02">2017-04-02</h2>
<ul>
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (&ldquo;MANAGING CLIMATE RISK&rdquo;): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
</ul>
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
<ul>
<li>Remove redundant/duplicate text in the DSpace submission license</li>
<li>Testing the CMYK patch on a collection with 650 items:</li>
</ul>
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Thumbnail&quot; -v &gt;&amp; /tmp/filter-media-cmyk.txt
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2017-04/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/" rel="prev" role="button">Previous page</a>
@ -408,6 +469,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -416,8 +479,6 @@ COPY 54701
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

72
docs/page/3/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2017-03-01T17:08:52&#43;02:00"/> <meta property="og:updated_time" content="2017-04-02T17:08:52&#43;02:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-03-01T17:08:52&#43;02:00", "dateModified": "2017-04-02T17:08:52&#43;02:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,41 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52&#43;02:00">Sun Apr 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-04-02">2017-04-02</h2>
<ul>
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (&ldquo;MANAGING CLIMATE RISK&rdquo;): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
</ul>
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
<ul>
<li>Remove redundant/duplicate text in the DSpace submission license</li>
<li>Testing the CMYK patch on a collection with 650 items:</li>
</ul>
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Thumbnail&quot; -v &gt;&amp; /tmp/filter-media-cmyk.txt
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2017-04/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2>
@ -395,35 +430,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-06-01T10:53:00&#43;03:00">Wed Jun 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-06-01">2016-06-01</h2>
<ul>
<li>Experimenting with IFPRI OAI (we want to harvest their publications)</li>
<li>After reading the <a href="https://www.oclc.org/support/services/contentdm/help/server-admin-help/oai-support.en.html">ContentDM documentation</a> I found IFPRI&rsquo;s OAI endpoint: <a href="http://ebrary.ifpri.org/oai/oai.php">http://ebrary.ifpri.org/oai/oai.php</a></li>
<li>After reading the <a href="https://www.openarchives.org/OAI/openarchivesprotocol.html">OAI documentation</a> and testing with an <a href="http://validator.oaipmh.com/">OAI validator</a> I found out how to get their publications</li>
<li>This is their publications set: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc">http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc</a></li>
<li>You can see the others by using the OAI <code>ListSets</code> verb: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListSets">http://ebrary.ifpri.org/oai/oai.php?verb=ListSets</a></li>
<li>Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in <code>dc.identifier.fund</code> to <code>cg.identifier.cpwfproject</code> and then the rest to <code>dc.description.sponsorship</code></li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-06/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/page/2/" rel="prev" role="button">Previous page</a>
@ -448,6 +454,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -456,8 +464,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

39
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@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2016-05-01T23:06:00&#43;03:00"/> <meta property="og:updated_time" content="2016-06-01T10:53:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2016-05-01T23:06:00&#43;03:00", "dateModified": "2016-06-01T10:53:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-06-01T10:53:00&#43;03:00">Wed Jun 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-06-01">2016-06-01</h2>
<ul>
<li>Experimenting with IFPRI OAI (we want to harvest their publications)</li>
<li>After reading the <a href="https://www.oclc.org/support/services/contentdm/help/server-admin-help/oai-support.en.html">ContentDM documentation</a> I found IFPRI&rsquo;s OAI endpoint: <a href="http://ebrary.ifpri.org/oai/oai.php">http://ebrary.ifpri.org/oai/oai.php</a></li>
<li>After reading the <a href="https://www.openarchives.org/OAI/openarchivesprotocol.html">OAI documentation</a> and testing with an <a href="http://validator.oaipmh.com/">OAI validator</a> I found out how to get their publications</li>
<li>This is their publications set: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc">http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc</a></li>
<li>You can see the others by using the OAI <code>ListSets</code> verb: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListSets">http://ebrary.ifpri.org/oai/oai.php?verb=ListSets</a></li>
<li>Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in <code>dc.identifier.fund</code> to <code>cg.identifier.cpwfproject</code> and then the rest to <code>dc.description.sponsorship</code></li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-06/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2>
@ -296,7 +325,7 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/posts/">Posts</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/posts/">Posts</a></h2>
<p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth</p> <p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth</p>
</header> </header>
<a href='https://alanorth.github.io/cgspace-notes/posts/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/posts/'>Read more →</a>
@ -330,6 +359,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -338,8 +369,6 @@
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

138
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@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2018-10-01T22:31:54&#43;03:00"/> <meta property="og:updated_time" content="2018-11-01T16:41:30&#43;02:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2018-10-01T22:31:54&#43;03:00", "dateModified": "2018-11-01T16:41:30&#43;02:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,31 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-11-01">2018-11-01</h2>
<ul>
<li>Finalize AReS Phase I and Phase II ToRs</li>
<li>Send a note about my <a href="https://github.com/ilri/dspace-statistics-api">dspace-statistics-api</a> to the dspace-tech mailing list</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-11/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
@ -98,7 +123,14 @@
</p> </p>
</header> </header>
2018-10-01 Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nairobi right now 2018-10-03 I see Moayad was busy collecting item views and downloads from CGSpace yesterday: # zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Oct/2018&quot; | awk '{print $1} ' | sort | uniq -c | sort -n | tail -n 10 933 40. <h2 id="2018-10-01">2018-10-01</h2>
<ul>
<li>Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items</li>
<li>I created a GitHub issue to track this <a href="https://github.com/ilri/DSpace/issues/389">#389</a>, because I&rsquo;m super busy in Nairobi right now</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a>
</article> </article>
@ -357,102 +389,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-01-02">2018-01-02</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li>And just before that I see this:</li>
</ul>
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
</code></pre>
<ul>
<li>Ah hah! So the pool was actually empty!</li>
<li>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</li>
<li>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</li>
<li>I notice this error quite a few times in dspace.log:</li>
</ul>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre>
<ul>
<li>And there are many of these errors every day for the past month:</li>
</ul>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre>
<ul>
<li>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -477,6 +413,8 @@ dspace.log.2018-01-02:34
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -485,8 +423,6 @@ dspace.log.2018-01-02:34
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

27
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@ -6,18 +6,41 @@
<description>Recent content in Posts on CGSpace Notes</description> <description>Recent content in Posts on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
<lastBuildDate>Mon, 01 Oct 2018 22:31:54 +0300</lastBuildDate> <lastBuildDate>Thu, 01 Nov 2018 16:41:30 +0200</lastBuildDate>
<atom:link href="https://alanorth.github.io/cgspace-notes/posts/index.xml" rel="self" type="application/rss+xml" /> <atom:link href="https://alanorth.github.io/cgspace-notes/posts/index.xml" rel="self" type="application/rss+xml" />
<item>
<title>November, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-11/</link>
<pubDate>Thu, 01 Nov 2018 16:41:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-11/</guid>
<description>&lt;h2 id=&#34;2018-11-01&#34;&gt;2018-11-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Finalize AReS Phase I and Phase II ToRs&lt;/li&gt;
&lt;li&gt;Send a note about my &lt;a href=&#34;https://github.com/ilri/dspace-statistics-api&#34;&gt;dspace-statistics-api&lt;/a&gt; to the dspace-tech mailing list&lt;/li&gt;
&lt;/ul&gt;
&lt;p&gt;&lt;/p&gt;</description>
</item>
<item> <item>
<title>October, 2018</title> <title>October, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-10/</link> <link>https://alanorth.github.io/cgspace-notes/2018-10/</link>
<pubDate>Mon, 01 Oct 2018 22:31:54 +0300</pubDate> <pubDate>Mon, 01 Oct 2018 22:31:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-10/</guid> <guid>https://alanorth.github.io/cgspace-notes/2018-10/</guid>
<description>2018-10-01 Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I&amp;rsquo;m super busy in Nairobi right now 2018-10-03 I see Moayad was busy collecting item views and downloads from CGSpace yesterday: # zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &amp;quot;02/Oct/2018&amp;quot; | awk &#39;{print $1} &#39; | sort | uniq -c | sort -n | tail -n 10 933 40.</description> <description>&lt;h2 id=&#34;2018-10-01&#34;&gt;2018-10-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items&lt;/li&gt;
&lt;li&gt;I created a GitHub issue to track this &lt;a href=&#34;https://github.com/ilri/DSpace/issues/389&#34;&gt;#389&lt;/a&gt;, because I&amp;rsquo;m super busy in Nairobi right now&lt;/li&gt;
&lt;/ul&gt;
&lt;p&gt;&lt;/p&gt;</description>
</item> </item>
<item> <item>

139
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View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2017-12-01T13:53:54&#43;03:00"/> <meta property="og:updated_time" content="2018-01-02T08:35:54-08:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-12-01T13:53:54&#43;03:00", "dateModified": "2018-01-02T08:35:54-08:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,102 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-01-02">2018-01-02</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li>And just before that I see this:</li>
</ul>
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
</code></pre>
<ul>
<li>Ah hah! So the pool was actually empty!</li>
<li>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</li>
<li>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</li>
<li>I notice this error quite a few times in dspace.log:</li>
</ul>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre>
<ul>
<li>And there are many of these errors every day for the past month:</li>
</ul>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre>
<ul>
<li>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
@ -349,41 +445,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52&#43;02:00">Sun Apr 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-04-02">2017-04-02</h2>
<ul>
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (&ldquo;MANAGING CLIMATE RISK&rdquo;): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
</ul>
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
<ul>
<li>Remove redundant/duplicate text in the DSpace submission license</li>
<li>Testing the CMYK patch on a collection with 650 items:</li>
</ul>
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Thumbnail&quot; -v &gt;&amp; /tmp/filter-media-cmyk.txt
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2017-04/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/posts/" rel="prev" role="button">Previous page</a>
@ -408,6 +469,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -416,8 +479,6 @@ COPY 54701
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

72
docs/posts/page/3/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2017-03-01T17:08:52&#43;02:00"/> <meta property="og:updated_time" content="2017-04-02T17:08:52&#43;02:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-03-01T17:08:52&#43;02:00", "dateModified": "2017-04-02T17:08:52&#43;02:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,41 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52&#43;02:00">Sun Apr 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-04-02">2017-04-02</h2>
<ul>
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (&ldquo;MANAGING CLIMATE RISK&rdquo;): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
</ul>
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
<ul>
<li>Remove redundant/duplicate text in the DSpace submission license</li>
<li>Testing the CMYK patch on a collection with 650 items:</li>
</ul>
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Thumbnail&quot; -v &gt;&amp; /tmp/filter-media-cmyk.txt
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2017-04/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2>
@ -395,35 +430,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-06-01T10:53:00&#43;03:00">Wed Jun 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-06-01">2016-06-01</h2>
<ul>
<li>Experimenting with IFPRI OAI (we want to harvest their publications)</li>
<li>After reading the <a href="https://www.oclc.org/support/services/contentdm/help/server-admin-help/oai-support.en.html">ContentDM documentation</a> I found IFPRI&rsquo;s OAI endpoint: <a href="http://ebrary.ifpri.org/oai/oai.php">http://ebrary.ifpri.org/oai/oai.php</a></li>
<li>After reading the <a href="https://www.openarchives.org/OAI/openarchivesprotocol.html">OAI documentation</a> and testing with an <a href="http://validator.oaipmh.com/">OAI validator</a> I found out how to get their publications</li>
<li>This is their publications set: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc">http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc</a></li>
<li>You can see the others by using the OAI <code>ListSets</code> verb: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListSets">http://ebrary.ifpri.org/oai/oai.php?verb=ListSets</a></li>
<li>Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in <code>dc.identifier.fund</code> to <code>cg.identifier.cpwfproject</code> and then the rest to <code>dc.description.sponsorship</code></li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-06/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/2/" rel="prev" role="button">Previous page</a>
@ -448,6 +454,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -456,8 +464,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

39
docs/posts/page/4/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2016-05-01T23:06:00&#43;03:00"/> <meta property="og:updated_time" content="2016-06-01T10:53:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2016-05-01T23:06:00&#43;03:00", "dateModified": "2016-06-01T10:53:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-06-01T10:53:00&#43;03:00">Wed Jun 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-06-01">2016-06-01</h2>
<ul>
<li>Experimenting with IFPRI OAI (we want to harvest their publications)</li>
<li>After reading the <a href="https://www.oclc.org/support/services/contentdm/help/server-admin-help/oai-support.en.html">ContentDM documentation</a> I found IFPRI&rsquo;s OAI endpoint: <a href="http://ebrary.ifpri.org/oai/oai.php">http://ebrary.ifpri.org/oai/oai.php</a></li>
<li>After reading the <a href="https://www.openarchives.org/OAI/openarchivesprotocol.html">OAI documentation</a> and testing with an <a href="http://validator.oaipmh.com/">OAI validator</a> I found out how to get their publications</li>
<li>This is their publications set: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc">http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc</a></li>
<li>You can see the others by using the OAI <code>ListSets</code> verb: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListSets">http://ebrary.ifpri.org/oai/oai.php?verb=ListSets</a></li>
<li>Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in <code>dc.identifier.fund</code> to <code>cg.identifier.cpwfproject</code> and then the rest to <code>dc.description.sponsorship</code></li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-06/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2>
@ -296,7 +325,7 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/posts/">Posts</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/posts/">Posts</a></h2>
<p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth</p> <p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth</p>
</header> </header>
<a href='https://alanorth.github.io/cgspace-notes/posts/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/posts/'>Read more →</a>
@ -330,6 +359,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -338,8 +369,6 @@
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

1
docs/robots.txt
View File

@ -1,6 +1,7 @@
User-agent: * User-agent: *
Disallow: /cgspace-notes/2018-11/
Disallow: /cgspace-notes/2018-10/ Disallow: /cgspace-notes/2018-10/
Disallow: /cgspace-notes/2018-09/ Disallow: /cgspace-notes/2018-09/
Disallow: /cgspace-notes/2018-08/ Disallow: /cgspace-notes/2018-08/

15
docs/sitemap.xml
View File

@ -2,9 +2,14 @@
<urlset xmlns="http://www.sitemaps.org/schemas/sitemap/0.9" <urlset xmlns="http://www.sitemaps.org/schemas/sitemap/0.9"
xmlns:xhtml="http://www.w3.org/1999/xhtml"> xmlns:xhtml="http://www.w3.org/1999/xhtml">
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-11/</loc>
<lastmod>2018-11-01T16:41:30+02:00</lastmod>
</url>
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/2018-10/</loc> <loc>https://alanorth.github.io/cgspace-notes/2018-10/</loc>
<lastmod>2018-10-30T14:13:08+02:00</lastmod> <lastmod>2018-11-01T16:42:20+02:00</lastmod>
</url> </url>
<url> <url>
@ -189,7 +194,7 @@
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/</loc> <loc>https://alanorth.github.io/cgspace-notes/</loc>
<lastmod>2018-10-30T14:13:08+02:00</lastmod> <lastmod>2018-11-01T16:41:30+02:00</lastmod>
<priority>0</priority> <priority>0</priority>
</url> </url>
@ -200,7 +205,7 @@
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc> <loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
<lastmod>2018-10-30T14:13:08+02:00</lastmod> <lastmod>2018-11-01T16:41:30+02:00</lastmod>
<priority>0</priority> <priority>0</priority>
</url> </url>
@ -212,13 +217,13 @@
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc> <loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
<lastmod>2018-10-30T14:13:08+02:00</lastmod> <lastmod>2018-11-01T16:41:30+02:00</lastmod>
<priority>0</priority> <priority>0</priority>
</url> </url>
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/tags/</loc> <loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
<lastmod>2018-10-30T14:13:08+02:00</lastmod> <lastmod>2018-11-01T16:41:30+02:00</lastmod>
<priority>0</priority> <priority>0</priority>
</url> </url>

138
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View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2018-10-01T22:31:54&#43;03:00"/> <meta property="og:updated_time" content="2018-11-01T16:41:30&#43;02:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2018-10-01T22:31:54&#43;03:00", "dateModified": "2018-11-01T16:41:30&#43;02:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,31 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-11-01">2018-11-01</h2>
<ul>
<li>Finalize AReS Phase I and Phase II ToRs</li>
<li>Send a note about my <a href="https://github.com/ilri/dspace-statistics-api">dspace-statistics-api</a> to the dspace-tech mailing list</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-11/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
@ -98,7 +123,14 @@
</p> </p>
</header> </header>
2018-10-01 Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nairobi right now 2018-10-03 I see Moayad was busy collecting item views and downloads from CGSpace yesterday: # zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Oct/2018&quot; | awk '{print $1} ' | sort | uniq -c | sort -n | tail -n 10 933 40. <h2 id="2018-10-01">2018-10-01</h2>
<ul>
<li>Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items</li>
<li>I created a GitHub issue to track this <a href="https://github.com/ilri/DSpace/issues/389">#389</a>, because I&rsquo;m super busy in Nairobi right now</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a>
</article> </article>
@ -357,102 +389,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-01-02">2018-01-02</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li>And just before that I see this:</li>
</ul>
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
</code></pre>
<ul>
<li>Ah hah! So the pool was actually empty!</li>
<li>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</li>
<li>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</li>
<li>I notice this error quite a few times in dspace.log:</li>
</ul>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre>
<ul>
<li>And there are many of these errors every day for the past month:</li>
</ul>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre>
<ul>
<li>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -477,6 +413,8 @@ dspace.log.2018-01-02:34
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -485,8 +423,6 @@ dspace.log.2018-01-02:34
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/tags/index.xml
View File

@ -6,7 +6,7 @@
<description>Recent content in Tags on CGSpace Notes</description> <description>Recent content in Tags on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
<lastBuildDate>Mon, 01 Oct 2018 22:31:54 +0300</lastBuildDate> <lastBuildDate>Thu, 01 Nov 2018 16:41:30 +0200</lastBuildDate>
<atom:link href="https://alanorth.github.io/cgspace-notes/tags/index.xml" rel="self" type="application/rss+xml" /> <atom:link href="https://alanorth.github.io/cgspace-notes/tags/index.xml" rel="self" type="application/rss+xml" />
@ -14,7 +14,7 @@
<item> <item>
<title>Notes</title> <title>Notes</title>
<link>https://alanorth.github.io/cgspace-notes/tags/notes/</link> <link>https://alanorth.github.io/cgspace-notes/tags/notes/</link>
<pubDate>Mon, 01 Oct 2018 22:31:54 +0300</pubDate> <pubDate>Thu, 01 Nov 2018 16:41:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/tags/notes/</guid> <guid>https://alanorth.github.io/cgspace-notes/tags/notes/</guid>
<description></description> <description></description>

136
docs/tags/notes/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
<meta property="og:updated_time" content="2018-10-01T22:31:54&#43;03:00"/> <meta property="og:updated_time" content="2018-11-01T16:41:30&#43;02:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -74,6 +74,31 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-11-01">2018-11-01</h2>
<ul>
<li>Finalize AReS Phase I and Phase II ToRs</li>
<li>Send a note about my <a href="https://github.com/ilri/dspace-statistics-api">dspace-statistics-api</a> to the dspace-tech mailing list</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-11/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
@ -83,7 +108,14 @@
</p> </p>
</header> </header>
2018-10-01 Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nairobi right now 2018-10-03 I see Moayad was busy collecting item views and downloads from CGSpace yesterday: # zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Oct/2018&quot; | awk '{print $1} ' | sort | uniq -c | sort -n | tail -n 10 933 40. <h2 id="2018-10-01">2018-10-01</h2>
<ul>
<li>Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items</li>
<li>I created a GitHub issue to track this <a href="https://github.com/ilri/DSpace/issues/389">#389</a>, because I&rsquo;m super busy in Nairobi right now</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a>
</article> </article>
@ -342,102 +374,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-01-02">2018-01-02</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li>And just before that I see this:</li>
</ul>
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
</code></pre>
<ul>
<li>Ah hah! So the pool was actually empty!</li>
<li>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</li>
<li>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</li>
<li>I notice this error quite a few times in dspace.log:</li>
</ul>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre>
<ul>
<li>And there are many of these errors every day for the past month:</li>
</ul>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre>
<ul>
<li>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -462,6 +398,8 @@ dspace.log.2018-01-02:34
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -470,8 +408,6 @@ dspace.log.2018-01-02:34
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

27
docs/tags/notes/index.xml
View File

@ -6,18 +6,41 @@
<description>Recent content in Notes on CGSpace Notes</description> <description>Recent content in Notes on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
<lastBuildDate>Mon, 01 Oct 2018 22:31:54 +0300</lastBuildDate> <lastBuildDate>Thu, 01 Nov 2018 16:41:30 +0200</lastBuildDate>
<atom:link href="https://alanorth.github.io/cgspace-notes/tags/notes/index.xml" rel="self" type="application/rss+xml" /> <atom:link href="https://alanorth.github.io/cgspace-notes/tags/notes/index.xml" rel="self" type="application/rss+xml" />
<item>
<title>November, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-11/</link>
<pubDate>Thu, 01 Nov 2018 16:41:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-11/</guid>
<description>&lt;h2 id=&#34;2018-11-01&#34;&gt;2018-11-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Finalize AReS Phase I and Phase II ToRs&lt;/li&gt;
&lt;li&gt;Send a note about my &lt;a href=&#34;https://github.com/ilri/dspace-statistics-api&#34;&gt;dspace-statistics-api&lt;/a&gt; to the dspace-tech mailing list&lt;/li&gt;
&lt;/ul&gt;
&lt;p&gt;&lt;/p&gt;</description>
</item>
<item> <item>
<title>October, 2018</title> <title>October, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-10/</link> <link>https://alanorth.github.io/cgspace-notes/2018-10/</link>
<pubDate>Mon, 01 Oct 2018 22:31:54 +0300</pubDate> <pubDate>Mon, 01 Oct 2018 22:31:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-10/</guid> <guid>https://alanorth.github.io/cgspace-notes/2018-10/</guid>
<description>2018-10-01 Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I&amp;rsquo;m super busy in Nairobi right now 2018-10-03 I see Moayad was busy collecting item views and downloads from CGSpace yesterday: # zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &amp;quot;02/Oct/2018&amp;quot; | awk &#39;{print $1} &#39; | sort | uniq -c | sort -n | tail -n 10 933 40.</description> <description>&lt;h2 id=&#34;2018-10-01&#34;&gt;2018-10-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items&lt;/li&gt;
&lt;li&gt;I created a GitHub issue to track this &lt;a href=&#34;https://github.com/ilri/DSpace/issues/389&#34;&gt;#389&lt;/a&gt;, because I&amp;rsquo;m super busy in Nairobi right now&lt;/li&gt;
&lt;/ul&gt;
&lt;p&gt;&lt;/p&gt;</description>
</item> </item>
<item> <item>

144
docs/tags/notes/page/2/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
<meta property="og:updated_time" content="2017-12-01T13:53:54&#43;03:00"/> <meta property="og:updated_time" content="2018-01-02T08:35:54-08:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -74,6 +74,102 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-01-02">2018-01-02</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li>And just before that I see this:</li>
</ul>
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
</code></pre>
<ul>
<li>Ah hah! So the pool was actually empty!</li>
<li>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</li>
<li>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</li>
<li>I notice this error quite a few times in dspace.log:</li>
</ul>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre>
<ul>
<li>And there are many of these errors every day for the past month:</li>
</ul>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre>
<ul>
<li>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
@ -349,48 +445,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-03-01T17:08:52&#43;02:00">Wed Mar 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-03-01">2017-03-01</h2>
<ul>
<li>Run the 279 CIAT author corrections on CGSpace</li>
</ul>
<h2 id="2017-03-02">2017-03-02</h2>
<ul>
<li>Skype with Michael and Peter, discussing moving the CGIAR Library to CGSpace</li>
<li>CGIAR people possibly open to moving content, redirecting library.cgiar.org to CGSpace and letting CGSpace resolve their handles</li>
<li>They might come in at the top level in one &ldquo;CGIAR System&rdquo; community, or with several communities</li>
<li>I need to spend a bit of time looking at the multiple handle support in DSpace and see if new content can be minted in both handles, or just one?</li>
<li>Need to send Peter and Michael some notes about this in a few days</li>
<li>Also, need to consider talking to Atmire about hiring them to bring ORCiD metadata to REST / OAI</li>
<li>Filed an issue on DSpace issue tracker for the <code>filter-media</code> bug that causes it to process JPGs even when limiting to the PDF thumbnail plugin: <a href="https://jira.duraspace.org/browse/DS-3516">DS-3516</a></li>
<li>Discovered that the ImageMagic <code>filter-media</code> plugin creates JPG thumbnails with the CMYK colorspace when the source PDF is using CMYK</li>
<li>Interestingly, it seems DSpace 4.x&rsquo;s thumbnails were sRGB, but forcing regeneration using DSpace 5.x&rsquo;s ImageMagick plugin creates CMYK JPGs if the source PDF was CMYK (see <a href="https://cgspace.cgiar.org/handle/10568/51999"><sup>10568</sup>&frasl;<sub>51999</sub></a>):</li>
</ul>
<pre><code>$ identify ~/Desktop/alc_contrastes_desafios.jpg
/Users/aorth/Desktop/alc_contrastes_desafios.jpg JPEG 464x600 464x600+0+0 8-bit CMYK 168KB 0.000u 0:00.000
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2017-03/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/" rel="prev" role="button">Previous page</a>
@ -415,6 +469,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -423,8 +479,6 @@ COPY 54701
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

78
docs/tags/notes/page/3/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
<meta property="og:updated_time" content="2017-02-07T07:04:52-08:00"/> <meta property="og:updated_time" content="2017-03-01T17:08:52&#43;02:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -74,6 +74,48 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-03-01T17:08:52&#43;02:00">Wed Mar 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-03-01">2017-03-01</h2>
<ul>
<li>Run the 279 CIAT author corrections on CGSpace</li>
</ul>
<h2 id="2017-03-02">2017-03-02</h2>
<ul>
<li>Skype with Michael and Peter, discussing moving the CGIAR Library to CGSpace</li>
<li>CGIAR people possibly open to moving content, redirecting library.cgiar.org to CGSpace and letting CGSpace resolve their handles</li>
<li>They might come in at the top level in one &ldquo;CGIAR System&rdquo; community, or with several communities</li>
<li>I need to spend a bit of time looking at the multiple handle support in DSpace and see if new content can be minted in both handles, or just one?</li>
<li>Need to send Peter and Michael some notes about this in a few days</li>
<li>Also, need to consider talking to Atmire about hiring them to bring ORCiD metadata to REST / OAI</li>
<li>Filed an issue on DSpace issue tracker for the <code>filter-media</code> bug that causes it to process JPGs even when limiting to the PDF thumbnail plugin: <a href="https://jira.duraspace.org/browse/DS-3516">DS-3516</a></li>
<li>Discovered that the ImageMagic <code>filter-media</code> plugin creates JPG thumbnails with the CMYK colorspace when the source PDF is using CMYK</li>
<li>Interestingly, it seems DSpace 4.x&rsquo;s thumbnails were sRGB, but forcing regeneration using DSpace 5.x&rsquo;s ImageMagick plugin creates CMYK JPGs if the source PDF was CMYK (see <a href="https://cgspace.cgiar.org/handle/10568/51999"><sup>10568</sup>&frasl;<sub>51999</sub></a>):</li>
</ul>
<pre><code>$ identify ~/Desktop/alc_contrastes_desafios.jpg
/Users/aorth/Desktop/alc_contrastes_desafios.jpg JPEG 464x600 464x600+0+0 8-bit CMYK 168KB 0.000u 0:00.000
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2017-03/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-02/">February, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-02/">February, 2017</a></h2>
@ -367,36 +409,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-05-01T23:06:00&#43;03:00">Sun May 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-05-01">2016-05-01</h2>
<ul>
<li>Since yesterday there have been 10,000 REST errors and the site has been unstable again</li>
<li>I have blocked access to the API now</li>
<li>There are 3,000 IPs accessing the REST API in a 24-hour period!</li>
</ul>
<pre><code># awk '{print $1}' /var/log/nginx/rest.log | uniq | wc -l
3168
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-05/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/page/2/" rel="prev" role="button">Previous page</a>
@ -421,6 +433,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -429,8 +443,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

36
docs/tags/notes/page/4/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
<meta property="og:updated_time" content="2016-04-04T11:06:00&#43;03:00"/> <meta property="og:updated_time" content="2016-05-01T23:06:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -74,6 +74,36 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-05-01T23:06:00&#43;03:00">Sun May 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-05-01">2016-05-01</h2>
<ul>
<li>Since yesterday there have been 10,000 REST errors and the site has been unstable again</li>
<li>I have blocked access to the API now</li>
<li>There are 3,000 IPs accessing the REST API in a 24-hour period!</li>
</ul>
<pre><code># awk '{print $1}' /var/log/nginx/rest.log | uniq | wc -l
3168
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-05/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-04/">April, 2016</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-04/">April, 2016</a></h2>
@ -271,6 +301,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -279,8 +311,6 @@
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

139
docs/tags/page/2/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2017-12-01T13:53:54&#43;03:00"/> <meta property="og:updated_time" content="2018-01-02T08:35:54-08:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-12-01T13:53:54&#43;03:00", "dateModified": "2018-01-02T08:35:54-08:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,102 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-01-02">2018-01-02</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li>And just before that I see this:</li>
</ul>
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
</code></pre>
<ul>
<li>Ah hah! So the pool was actually empty!</li>
<li>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</li>
<li>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</li>
<li>I notice this error quite a few times in dspace.log:</li>
</ul>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre>
<ul>
<li>And there are many of these errors every day for the past month:</li>
</ul>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre>
<ul>
<li>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
@ -349,41 +445,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52&#43;02:00">Sun Apr 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-04-02">2017-04-02</h2>
<ul>
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (&ldquo;MANAGING CLIMATE RISK&rdquo;): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
</ul>
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
<ul>
<li>Remove redundant/duplicate text in the DSpace submission license</li>
<li>Testing the CMYK patch on a collection with 650 items:</li>
</ul>
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Thumbnail&quot; -v &gt;&amp; /tmp/filter-media-cmyk.txt
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2017-04/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/" rel="prev" role="button">Previous page</a>
@ -408,6 +469,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -416,8 +479,6 @@ COPY 54701
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

72
docs/tags/page/3/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2017-03-01T17:08:52&#43;02:00"/> <meta property="og:updated_time" content="2017-04-02T17:08:52&#43;02:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-03-01T17:08:52&#43;02:00", "dateModified": "2017-04-02T17:08:52&#43;02:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,41 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52&#43;02:00">Sun Apr 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-04-02">2017-04-02</h2>
<ul>
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (&ldquo;MANAGING CLIMATE RISK&rdquo;): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
</ul>
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
<ul>
<li>Remove redundant/duplicate text in the DSpace submission license</li>
<li>Testing the CMYK patch on a collection with 650 items:</li>
</ul>
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Thumbnail&quot; -v &gt;&amp; /tmp/filter-media-cmyk.txt
</code></pre>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2017-04/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2>
@ -395,35 +430,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-06-01T10:53:00&#43;03:00">Wed Jun 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-06-01">2016-06-01</h2>
<ul>
<li>Experimenting with IFPRI OAI (we want to harvest their publications)</li>
<li>After reading the <a href="https://www.oclc.org/support/services/contentdm/help/server-admin-help/oai-support.en.html">ContentDM documentation</a> I found IFPRI&rsquo;s OAI endpoint: <a href="http://ebrary.ifpri.org/oai/oai.php">http://ebrary.ifpri.org/oai/oai.php</a></li>
<li>After reading the <a href="https://www.openarchives.org/OAI/openarchivesprotocol.html">OAI documentation</a> and testing with an <a href="http://validator.oaipmh.com/">OAI validator</a> I found out how to get their publications</li>
<li>This is their publications set: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc">http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc</a></li>
<li>You can see the others by using the OAI <code>ListSets</code> verb: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListSets">http://ebrary.ifpri.org/oai/oai.php?verb=ListSets</a></li>
<li>Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in <code>dc.identifier.fund</code> to <code>cg.identifier.cpwfproject</code> and then the rest to <code>dc.description.sponsorship</code></li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-06/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/2/" rel="prev" role="button">Previous page</a>
@ -448,6 +454,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -456,8 +464,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>

39
docs/tags/page/4/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." /> <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2016-05-01T23:06:00&#43;03:00"/> <meta property="og:updated_time" content="2016-06-01T10:53:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -28,7 +28,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2016-05-01T23:06:00&#43;03:00", "dateModified": "2016-06-01T10:53:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -89,6 +89,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-06-01T10:53:00&#43;03:00">Wed Jun 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-06-01">2016-06-01</h2>
<ul>
<li>Experimenting with IFPRI OAI (we want to harvest their publications)</li>
<li>After reading the <a href="https://www.oclc.org/support/services/contentdm/help/server-admin-help/oai-support.en.html">ContentDM documentation</a> I found IFPRI&rsquo;s OAI endpoint: <a href="http://ebrary.ifpri.org/oai/oai.php">http://ebrary.ifpri.org/oai/oai.php</a></li>
<li>After reading the <a href="https://www.openarchives.org/OAI/openarchivesprotocol.html">OAI documentation</a> and testing with an <a href="http://validator.oaipmh.com/">OAI validator</a> I found out how to get their publications</li>
<li>This is their publications set: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc">http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc</a></li>
<li>You can see the others by using the OAI <code>ListSets</code> verb: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListSets">http://ebrary.ifpri.org/oai/oai.php?verb=ListSets</a></li>
<li>Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in <code>dc.identifier.fund</code> to <code>cg.identifier.cpwfproject</code> and then the rest to <code>dc.description.sponsorship</code></li>
</ul>
<p></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-06/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2>
@ -296,7 +325,7 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/posts/">Posts</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/posts/">Posts</a></h2>
<p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth</p> <p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth</p>
</header> </header>
<a href='https://alanorth.github.io/cgspace-notes/posts/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/posts/'>Read more →</a>
@ -330,6 +359,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li> <li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li> <li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
@ -338,8 +369,6 @@
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li> <li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
</ol> </ol>
</section> </section>