Add notes for 2020-11-30
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@ -502,4 +502,38 @@ facet=true&f.owningComm.facet.limit=5&f.owningComm.facet.offset=5&f.countryCode.
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- Peter told me that he can't find the [CGIAR Research Program on Livestock](https://cgspace.cgiar.org/handle/10568/80099) community in the community filters on AReS
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- I looked briefly and couldn't find it either so I filed an issue on OpenRXV: https://github.com/ilri/OpenRXV/issues/62
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## 2020-11-30
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- Ben Hack asked for the ILRI subject we are using on CGSpace
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- I linked him the input-forms.xml file and also sent him a list of 112 terms extracted with `xml` from the xmlstarlet package:
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```
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$ xml sel -t -m '//value-pairs[@value-pairs-name="ilrisubject"]/pair/displayed-value/text()' -c '.' -n dspace/config/input-forms.xml
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```
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- IWMI sent me a few new ORCID identifiers so I combined them with our existing ones as well as another ILRI one that Tezira asked me to update, filtered the unique ones, and then resolved their names using my `resolve-orcids.py` script:
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```
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$ cat ~/src/git/DSpace/dspace/config/controlled-vocabularies/cg-creator-id.xml /tmp/iwmi-orcids.txt /tmp/hung.txt | grep -oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort | uniq > /tmp/2020-11-30-combined-orcids.txt
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$ ./resolve-orcids.py -i /tmp/2020-11-30-combined-orcids.txt -o /tmp/2020-11-30-combined-orcids-names.txt -d
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# sort names, copy to cg-creator-id.xml, add XML formatting, and then format with tidy (preserving accents)
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$ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-id.xml
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```
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- I used my `fix-metadata-values.py` script to update the old occurences of Hung's ORCID and some others that I see have changed:
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```
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$ cat 2020-11-30-fix-hung-orcid.csv
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cg.creator.id,correct
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"Hung Nguyen-Viet: 0000-0001-9877-0596","Hung Nguyen-Viet: 0000-0003-1549-2733"
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"Adriana Tofiño: 0000-0001-7115-7169","Adriana Tofiño Rivera: 0000-0001-7115-7169"
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"Cristhian Puerta Rodriguez: 0000-0001-5992-1697","David Puerta: 0000-0001-5992-1697"
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"Ermias Betemariam: 0000-0002-1955-6995","Ermias Aynekulu: 0000-0002-1955-6995"
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"Hirut Betaw: 0000-0002-1205-3711","Betaw Hirut: 0000-0002-1205-3711"
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"Megan Zandstra: 0000-0002-3326-6492","Megan McNeil Zandstra: 0000-0002-3326-6492"
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"Tolu Eyinla: 0000-0003-1442-4392","Toluwalope Emmanuel: 0000-0003-1442-4392"
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"VInay Nangia: 0000-0001-5148-8614","Vinay Nangia: 0000-0001-5148-8614"
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$ ./fix-metadata-values.py -i 2020-11-30-fix-hung-orcid.csv -db dspace63 -u dspacetest -p 'dom@in34sniper' -f cg.creator.id -t 'correct' -m 240
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```
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<!-- vim: set sw=2 ts=2: -->
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@ -18,7 +18,7 @@ Working on second phase of metadata migration, looks like this will work for mov
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<meta property="og:type" content="article" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2016-06/" />
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<meta property="article:published_time" content="2016-06-01T10:53:00+03:00" />
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<meta property="article:modified_time" content="2020-04-13T15:30:24+03:00" />
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<meta property="article:modified_time" content="2020-11-30T12:10:20+02:00" />
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<meta name="twitter:card" content="summary"/>
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<meta name="twitter:title" content="June, 2016"/>
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@ -41,9 +41,9 @@ Working on second phase of metadata migration, looks like this will work for mov
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"@type": "BlogPosting",
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"headline": "June, 2016",
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"url": "https://alanorth.github.io/cgspace-notes/2016-06/",
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"wordCount": "1549",
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"wordCount": "1551",
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"datePublished": "2016-06-01T10:53:00+03:00",
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"dateModified": "2020-04-13T15:30:24+03:00",
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"dateModified": "2020-11-30T12:10:20+02:00",
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"author": {
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"@type": "Person",
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"name": "Alan Orth"
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@ -239,7 +239,7 @@ UPDATE 960
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<ul>
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<li>Discuss controlled vocabularies for ~28 fields</li>
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<li>Looks like this is all we need: <a href="https://wiki.lyrasis.org/display/DSDOC5x/Submission+User+Interface#SubmissionUserInterface-ConfiguringControlledVocabularies">https://wiki.lyrasis.org/display/DSDOC5x/Submission+User+Interface#SubmissionUserInterface-ConfiguringControlledVocabularies</a></li>
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<li>I wrote an XPath expression to extract the ILRI subjects from <code>input-forms.xml</code> (uses xmlstartlet):</li>
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<li>I wrote an XPath expression to extract the ILRI subjects from <code>input-forms.xml</code> (from the xmlstarlet package):</li>
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</ul>
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<pre><code>$ xml sel -t -m '//value-pairs[@value-pairs-name="ilrisubject"]/pair/displayed-value/text()' -c '.' -n dspace/config/input-forms.xml
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</code></pre><ul>
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@ -17,7 +17,7 @@ So far we’ve spent at least fifty hours to process the statistics and stat
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<meta property="og:type" content="article" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2020-11/" />
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<meta property="article:published_time" content="2020-11-01T13:11:54+02:00" />
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<meta property="article:modified_time" content="2020-11-29T08:40:58+02:00" />
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<meta property="article:modified_time" content="2020-11-29T14:50:02+02:00" />
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<meta name="twitter:card" content="summary"/>
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<meta name="twitter:title" content="November, 2020"/>
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@ -39,9 +39,9 @@ So far we’ve spent at least fifty hours to process the statistics and stat
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"@type": "BlogPosting",
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"headline": "November, 2020",
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"url": "https://alanorth.github.io/cgspace-notes/2020-11/",
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"wordCount": "3438",
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"wordCount": "3655",
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"datePublished": "2020-11-01T13:11:54+02:00",
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"dateModified": "2020-11-29T08:40:58+02:00",
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"dateModified": "2020-11-29T14:50:02+02:00",
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"author": {
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"@type": "Person",
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"name": "Alan Orth"
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@ -677,7 +677,37 @@ COPY 87411
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</ul>
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</li>
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</ul>
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<!-- raw HTML omitted -->
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<h2 id="2020-11-30">2020-11-30</h2>
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<ul>
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<li>Ben Hack asked for the ILRI subject we are using on CGSpace
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<ul>
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<li>I linked him the input-forms.xml file and also sent him a list of 112 terms extracted with <code>xml</code> from the xmlstarlet package:</li>
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</ul>
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</li>
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</ul>
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<pre><code>$ xml sel -t -m '//value-pairs[@value-pairs-name="ilrisubject"]/pair/displayed-value/text()' -c '.' -n dspace/config/input-forms.xml
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</code></pre><ul>
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<li>IWMI sent me a few new ORCID identifiers so I combined them with our existing ones as well as another ILRI one that Tezira asked me to update, filtered the unique ones, and then resolved their names using my <code>resolve-orcids.py</code> script:</li>
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</ul>
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<pre><code>$ cat ~/src/git/DSpace/dspace/config/controlled-vocabularies/cg-creator-id.xml /tmp/iwmi-orcids.txt /tmp/hung.txt | grep -oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort | uniq > /tmp/2020-11-30-combined-orcids.txt
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$ ./resolve-orcids.py -i /tmp/2020-11-30-combined-orcids.txt -o /tmp/2020-11-30-combined-orcids-names.txt -d
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# sort names, copy to cg-creator-id.xml, add XML formatting, and then format with tidy (preserving accents)
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$ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-id.xml
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</code></pre><ul>
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<li>I used my <code>fix-metadata-values.py</code> script to update the old occurences of Hung’s ORCID and some others that I see have changed:</li>
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</ul>
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<pre><code>$ cat 2020-11-30-fix-hung-orcid.csv
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cg.creator.id,correct
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"Hung Nguyen-Viet: 0000-0001-9877-0596","Hung Nguyen-Viet: 0000-0003-1549-2733"
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"Adriana Tofiño: 0000-0001-7115-7169","Adriana Tofiño Rivera: 0000-0001-7115-7169"
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"Cristhian Puerta Rodriguez: 0000-0001-5992-1697","David Puerta: 0000-0001-5992-1697"
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"Ermias Betemariam: 0000-0002-1955-6995","Ermias Aynekulu: 0000-0002-1955-6995"
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"Hirut Betaw: 0000-0002-1205-3711","Betaw Hirut: 0000-0002-1205-3711"
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"Megan Zandstra: 0000-0002-3326-6492","Megan McNeil Zandstra: 0000-0002-3326-6492"
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"Tolu Eyinla: 0000-0003-1442-4392","Toluwalope Emmanuel: 0000-0003-1442-4392"
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"VInay Nangia: 0000-0001-5148-8614","Vinay Nangia: 0000-0001-5148-8614"
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$ ./fix-metadata-values.py -i 2020-11-30-fix-hung-orcid.csv -db dspace63 -u dspacetest -p 'dom@in34sniper' -f cg.creator.id -t 'correct' -m 240
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</code></pre><!-- raw HTML omitted -->
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:type" content="website" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
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<meta property="og:updated_time" content="2020-11-29T08:40:58+02:00" />
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<meta property="og:updated_time" content="2020-11-29T14:50:02+02:00" />
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<meta name="twitter:card" content="summary"/>
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<meta name="twitter:title" content="Categories"/>
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2020-11-29T08:40:58+02:00" />
|
||||
<meta property="og:updated_time" content="2020-11-30T12:10:20+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
|
|
|
@ -9,7 +9,7 @@
|
|||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2020-11-29T08:40:58+02:00" />
|
||||
<meta property="og:updated_time" content="2020-11-30T12:10:20+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
|
|
|
@ -9,7 +9,7 @@
|
|||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2020-11-29T08:40:58+02:00" />
|
||||
<meta property="og:updated_time" content="2020-11-30T12:10:20+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
|
|
|
@ -9,7 +9,7 @@
|
|||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2020-11-29T08:40:58+02:00" />
|
||||
<meta property="og:updated_time" content="2020-11-30T12:10:20+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
|
|
|
@ -4,7 +4,7 @@
|
|||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
|
||||
<lastmod>2020-11-29T08:40:58+02:00</lastmod>
|
||||
<lastmod>2020-11-29T14:50:02+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
|
@ -14,7 +14,7 @@
|
|||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/</loc>
|
||||
<lastmod>2020-11-29T08:40:58+02:00</lastmod>
|
||||
<lastmod>2020-11-30T12:10:20+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
|
@ -24,22 +24,22 @@
|
|||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
|
||||
<lastmod>2020-11-29T08:40:58+02:00</lastmod>
|
||||
<lastmod>2020-11-29T14:50:02+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
|
||||
<lastmod>2020-11-29T08:40:58+02:00</lastmod>
|
||||
<lastmod>2020-11-30T12:10:20+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
|
||||
<lastmod>2020-11-29T08:40:58+02:00</lastmod>
|
||||
<lastmod>2020-11-30T12:10:20+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2020-11/</loc>
|
||||
<lastmod>2020-11-29T08:40:58+02:00</lastmod>
|
||||
<lastmod>2020-11-29T14:50:02+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
|
@ -239,7 +239,7 @@
|
|||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
|
||||
<lastmod>2020-04-13T15:30:24+03:00</lastmod>
|
||||
<lastmod>2020-11-30T12:10:20+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
|
@ -319,7 +319,7 @@
|
|||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2016-06/</loc>
|
||||
<lastmod>2020-04-13T15:30:24+03:00</lastmod>
|
||||
<lastmod>2020-11-30T12:10:20+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
|
|
|
@ -9,7 +9,7 @@
|
|||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
|
||||
<meta property="og:updated_time" content="2020-11-29T08:40:58+02:00" />
|
||||
<meta property="og:updated_time" content="2020-11-30T12:10:20+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Tags"/>
|
||||
|
|
|
@ -9,7 +9,7 @@
|
|||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
|
||||
<meta property="og:updated_time" content="2020-04-13T15:30:24+03:00" />
|
||||
<meta property="og:updated_time" content="2020-11-30T12:10:20+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Notes"/>
|
||||
|
|
|
@ -9,7 +9,7 @@
|
|||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
|
||||
<meta property="og:updated_time" content="2020-04-13T15:30:24+03:00" />
|
||||
<meta property="og:updated_time" content="2020-11-30T12:10:20+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Notes"/>
|
||||
|
|
|
@ -9,7 +9,7 @@
|
|||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
|
||||
<meta property="og:updated_time" content="2020-04-13T15:30:24+03:00" />
|
||||
<meta property="og:updated_time" content="2020-11-30T12:10:20+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Notes"/>
|
||||
|
|
Loading…
Reference in New Issue