mirror of
https://github.com/alanorth/cgspace-notes.git
synced 2024-11-22 06:35:03 +01:00
Update notes for 2018-12-20
This commit is contained in:
parent
5ca656ee15
commit
568aa854d3
GPG Key ID:
0FB860CC9C45B1B9
@ -421,5 +421,68 @@ $ ls -lh cgspace_2018-12-19.backup*
|
||||
```
|
||||
|
||||
- Looks like it's really not worth it...
|
||||
- Peter pointed out that Discovery filters for CTA subjects on item pages were not working
|
||||
- It looks like there were some mismatches in the Discovery index names and the XMLUI configuration, so I fixed them ([#406](https://github.com/ilri/DSpace/pull/406))
|
||||
- Peter asked if we could create a controlled vocabulary for publishers (`dc.publisher`)
|
||||
- I see we have about 3500 distinct publishers:
|
||||
|
||||
```
|
||||
# SELECT COUNT(DISTINCT(text_value)) FROM metadatavalue WHERE resource_type_id=2 AND metadata_field_id=39;
|
||||
count
|
||||
-------
|
||||
3522
|
||||
(1 row)
|
||||
```
|
||||
|
||||
- I reverted the metadata changes related to "Unrestricted Access" and "Restricted Access" on DSpace Test because we're not pushing forward with the new status terms for now
|
||||
- Purge remaining Oracle Java 8 stuff from CGSpace (linode18) since we migrated to OpenJDK a few months ago:
|
||||
|
||||
```
|
||||
# dpkg -P oracle-java8-installer oracle-java8-set-default
|
||||
```
|
||||
|
||||
- Update usage rights on CGSpace as we agreed with Maria Garruccio and Peter last month:
|
||||
|
||||
```
|
||||
$ ./fix-metadata-values.py -i /tmp/2018-11-27-update-rights.csv -f dc.rights -t correct -m 53 -db dspace -u dspace -p 'fuu' -d
|
||||
Connected to database.
|
||||
Fixed 466 occurences of: Copyrighted; Any re-use allowed
|
||||
```
|
||||
|
||||
- Upgrade PostgreSQL on CGSpace (linode18) from 9.5 to 9.6:
|
||||
|
||||
```
|
||||
# apt install postgresql-9.6 postgresql-client-9.6 postgresql-contrib-9.6 postgresql-server-dev-9.6
|
||||
# pg_ctlcluster 9.5 main stop
|
||||
# tar -cvzpf var-lib-postgresql-9.5.tar.gz /var/lib/postgresql/9.5
|
||||
# tar -cvzpf etc-postgresql-9.5.tar.gz /etc/postgresql/9.5
|
||||
# pg_ctlcluster 9.6 main stop
|
||||
# pg_dropcluster 9.6 main
|
||||
# pg_upgradecluster 9.5 main
|
||||
# pg_dropcluster 9.5 main
|
||||
# dpkg -l | grep postgresql | grep 9.5 | awk '{print $2}' | xargs dpkg -r
|
||||
```
|
||||
|
||||
- I've been running PostgreSQL 9.6 for months on my local development and public DSpace Test (linode19) environments
|
||||
- Run all system updates on CGSpace (linode18) and restart the server
|
||||
- Try to run the DSpace cleanup script on CGSpace (linode18), but I get some errors about foreign key constraints:
|
||||
|
||||
```
|
||||
$ dspace cleanup -v
|
||||
- Deleting bitstream information (ID: 158227)
|
||||
- Deleting bitstream record from database (ID: 158227)
|
||||
Error: ERROR: update or delete on table "bitstream" violates foreign key constraint "bundle_primary_bitstream_id_fkey" on table "bundle"
|
||||
Detail: Key (bitstream_id)=(158227) is still referenced from table "bundle".
|
||||
...
|
||||
```
|
||||
|
||||
- As always, the solution is to delete those IDs manually in PostgreSQL:
|
||||
|
||||
```
|
||||
$ psql dspace -c 'update bundle set primary_bitstream_id=NULL where primary_bitstream_id in (158227, 158251);'
|
||||
UPDATE 1
|
||||
```
|
||||
|
||||
- After all that I started a full Discovery reindex to get the index name changes and rights updates
|
||||
|
||||
<!-- vim: set sw=2 ts=2: -->
|
||||
|
||||
@ -21,7 +21,7 @@ I noticed that there is another issue with PDF thumbnails on CGSpace, and I see
|
||||
" />
|
||||
<meta property="og:type" content="article" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-12/" /><meta property="article:published_time" content="2018-12-02T02:09:30+02:00"/>
|
||||
<meta property="article:modified_time" content="2018-12-19T11:05:04+02:00"/>
|
||||
<meta property="article:modified_time" content="2018-12-20T12:56:16+02:00"/>
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="December, 2018"/>
|
||||
@ -48,9 +48,9 @@ I noticed that there is another issue with PDF thumbnails on CGSpace, and I see
|
||||
"@type": "BlogPosting",
|
||||
"headline": "December, 2018",
|
||||
"url": "https://alanorth.github.io/cgspace-notes/2018-12/",
|
||||
"wordCount": "2576",
|
||||
"wordCount": "2940",
|
||||
"datePublished": "2018-12-02T02:09:30+02:00",
|
||||
"dateModified": "2018-12-19T11:05:04+02:00",
|
||||
"dateModified": "2018-12-20T12:56:16+02:00",
|
||||
"author": {
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
@ -599,6 +599,75 @@ $ ls -lh cgspace_2018-12-19.backup*
|
||||
|
||||
<ul>
|
||||
<li>Looks like it’s really not worth it…</li>
|
||||
<li>Peter pointed out that Discovery filters for CTA subjects on item pages were not working</li>
|
||||
<li>It looks like there were some mismatches in the Discovery index names and the XMLUI configuration, so I fixed them (<a href="https://github.com/ilri/DSpace/pull/406">#406</a>)</li>
|
||||
<li>Peter asked if we could create a controlled vocabulary for publishers (<code>dc.publisher</code>)</li>
|
||||
<li>I see we have about 3500 distinct publishers:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code># SELECT COUNT(DISTINCT(text_value)) FROM metadatavalue WHERE resource_type_id=2 AND metadata_field_id=39;
|
||||
count
|
||||
-------
|
||||
3522
|
||||
(1 row)
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>I reverted the metadata changes related to “Unrestricted Access” and “Restricted Access” on DSpace Test because we’re not pushing forward with the new status terms for now</li>
|
||||
<li>Purge remaining Oracle Java 8 stuff from CGSpace (linode18) since we migrated to OpenJDK a few months ago:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code># dpkg -P oracle-java8-installer oracle-java8-set-default
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Update usage rights on CGSpace as we agreed with Maria Garruccio and Peter last month:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2018-11-27-update-rights.csv -f dc.rights -t correct -m 53 -db dspace -u dspace -p 'fuu' -d
|
||||
Connected to database.
|
||||
Fixed 466 occurences of: Copyrighted; Any re-use allowed
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>Upgrade PostgreSQL on CGSpace (linode18) from 9.5 to 9.6:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code># apt install postgresql-9.6 postgresql-client-9.6 postgresql-contrib-9.6 postgresql-server-dev-9.6
|
||||
# pg_ctlcluster 9.5 main stop
|
||||
# tar -cvzpf var-lib-postgresql-9.5.tar.gz /var/lib/postgresql/9.5
|
||||
# tar -cvzpf etc-postgresql-9.5.tar.gz /etc/postgresql/9.5
|
||||
# pg_ctlcluster 9.6 main stop
|
||||
# pg_dropcluster 9.6 main
|
||||
# pg_upgradecluster 9.5 main
|
||||
# pg_dropcluster 9.5 main
|
||||
# dpkg -l | grep postgresql | grep 9.5 | awk '{print $2}' | xargs dpkg -r
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>I’ve been running PostgreSQL 9.6 for months on my local development and public DSpace Test (linode19) environments</li>
|
||||
<li>Run all system updates on CGSpace (linode18) and restart the server</li>
|
||||
<li>Try to run the DSpace cleanup script on CGSpace (linode18), but I get some errors about foreign key constraints:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ dspace cleanup -v
|
||||
- Deleting bitstream information (ID: 158227)
|
||||
- Deleting bitstream record from database (ID: 158227)
|
||||
Error: ERROR: update or delete on table "bitstream" violates foreign key constraint "bundle_primary_bitstream_id_fkey" on table "bundle"
|
||||
Detail: Key (bitstream_id)=(158227) is still referenced from table "bundle".
|
||||
...
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>As always, the solution is to delete those IDs manually in PostgreSQL:</li>
|
||||
</ul>
|
||||
|
||||
<pre><code>$ psql dspace -c 'update bundle set primary_bitstream_id=NULL where primary_bitstream_id in (158227, 158251);'
|
||||
UPDATE 1
|
||||
</code></pre>
|
||||
|
||||
<ul>
|
||||
<li>After all that I started a full Discovery reindex to get the index name changes and rights updates</li>
|
||||
</ul>
|
||||
|
||||
<!-- vim: set sw=2 ts=2: -->
|
||||
|
||||
@ -4,7 +4,7 @@
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2018-12/</loc>
|
||||
<lastmod>2018-12-19T11:05:04+02:00</lastmod>
|
||||
<lastmod>2018-12-20T12:56:16+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
@ -199,7 +199,7 @@
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/</loc>
|
||||
<lastmod>2018-12-19T11:05:04+02:00</lastmod>
|
||||
<lastmod>2018-12-20T12:56:16+02:00</lastmod>
|
||||
<priority>0</priority>
|
||||
</url>
|
||||
|
||||
@ -210,7 +210,7 @@
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
|
||||
<lastmod>2018-12-19T11:05:04+02:00</lastmod>
|
||||
<lastmod>2018-12-20T12:56:16+02:00</lastmod>
|
||||
<priority>0</priority>
|
||||
</url>
|
||||
|
||||
@ -222,13 +222,13 @@
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
|
||||
<lastmod>2018-12-19T11:05:04+02:00</lastmod>
|
||||
<lastmod>2018-12-20T12:56:16+02:00</lastmod>
|
||||
<priority>0</priority>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
|
||||
<lastmod>2018-12-19T11:05:04+02:00</lastmod>
|
||||
<lastmod>2018-12-20T12:56:16+02:00</lastmod>
|
||||
<priority>0</priority>
|
||||
</url>
|
||||
|
||||
|
||||
Loading…
Reference in New Issue
Block a user