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Update notes for 2017-01-24
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@ -194,8 +194,7 @@ value + "__description:" + cells["dc.type"].value
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- Test importing of the new CIAT records (actually there are 232, not 234):
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```
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$ JAVA_OPTS="-Xmx512m -Dfile.encoding=UTF-8" /home/dspacetest.cgiar.org/bin/dspace import --add --eperson=aorth@mjanja.ch --collection=10568
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/79042 --source /home/aorth/CIAT_234/SimpleArchiveFormat/ --mapfile=/tmp/ciat.map &> /tmp/ciat.log
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$ JAVA_OPTS="-Xmx512m -Dfile.encoding=UTF-8" /home/dspacetest.cgiar.org/bin/dspace import --add --eperson=aorth@mjanja.ch --collection=10568/79042 --source /home/aorth/CIAT_234/SimpleArchiveFormat/ --mapfile=/tmp/ciat.map &> /tmp/ciat.log
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```
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- Many of the PDFs are 20, 30, 40, 50+ MB, which makes a total of 4GB
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@ -246,3 +245,12 @@ $ for community in 10568/171 10568/27868 10568/231 10568/27869 10568/150 10568/2
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```
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$ ./fix-metadata-values.py -i /tmp/fix-49-journal-titles.csv -f dc.source -t correct -m 55 -d dspace -u dspace -p 'password'
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```
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- Create a new list of the top 500 journal titles from the database:
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```
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dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by count desc limit 500) to /tmp/journal-titles.csv with csv;
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```
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- Then sort them in OpenRefine and create a controlled vocabulary by manually adding the XML markup, pull request ([#298](https://github.com/ilri/DSpace/pull/298))
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- This would be the last issue remaining to close the meta issue about switching to controlled vocabularies ([#69](https://github.com/ilri/DSpace/pull/69))
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@ -59,7 +59,7 @@ I asked on the dspace-tech mailing list because it seems to be broken, and actua
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"headline": "January, 2017",
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"url": "https://alanorth.github.io/cgspace-notes/2017-01/",
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"wordCount": "1327",
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"wordCount": "1400",
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"datePublished": "2017-01-02T10:43:00+03:00",
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@ -299,8 +299,7 @@ UnicodeEncodeError: 'ascii' codec can't encode character u'\xe4' in position 15:
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<li>Now get the top 500 journal titles:</li>
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</ul>
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by cou
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nt desc limit 500) to /tmp/journal-titles.csv with csv;
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by count desc limit 500) to /tmp/journal-titles.csv with csv;
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</code></pre>
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<ul>
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@ -351,8 +350,7 @@ delete from collection2item where id = '91082';
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<li>Test importing of the new CIAT records (actually there are 232, not 234):</li>
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</ul>
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<pre><code>$ JAVA_OPTS="-Xmx512m -Dfile.encoding=UTF-8" /home/dspacetest.cgiar.org/bin/dspace import --add --eperson=aorth@mjanja.ch --collection=10568
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/79042 --source /home/aorth/CIAT_234/SimpleArchiveFormat/ --mapfile=/tmp/ciat.map &> /tmp/ciat.log
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<pre><code>$ JAVA_OPTS="-Xmx512m -Dfile.encoding=UTF-8" /home/dspacetest.cgiar.org/bin/dspace import --add --eperson=aorth@mjanja.ch --collection=10568/79042 --source /home/aorth/CIAT_234/SimpleArchiveFormat/ --mapfile=/tmp/ciat.map &> /tmp/ciat.log
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</code></pre>
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<ul>
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@ -413,6 +411,18 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
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<pre><code>$ ./fix-metadata-values.py -i /tmp/fix-49-journal-titles.csv -f dc.source -t correct -m 55 -d dspace -u dspace -p 'password'
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</code></pre>
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<ul>
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<li>Create a new list of the top 500 journal titles from the database:</li>
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</ul>
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by count desc limit 500) to /tmp/journal-titles.csv with csv;
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</code></pre>
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<ul>
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<li>Then sort them in OpenRefine and create a controlled vocabulary by manually adding the XML markup, pull request (<a href="https://github.com/ilri/DSpace/pull/298">#298</a>)</li>
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<li>This would be the last issue remaining to close the meta issue about switching to controlled vocabularies (<a href="https://github.com/ilri/DSpace/pull/69">#69</a>)</li>
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</ul>
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@ -180,8 +180,7 @@ UnicodeEncodeError: 'ascii' codec can't encode character u'\xe4&
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<li>Now get the top 500 journal titles:</li>
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</ul>
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by cou
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nt desc limit 500) to /tmp/journal-titles.csv with csv;
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by count desc limit 500) to /tmp/journal-titles.csv with csv;
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</code></pre>
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<ul>
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@ -232,8 +231,7 @@ delete from collection2item where id = '91082';
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<li>Test importing of the new CIAT records (actually there are 232, not 234):</li>
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</ul>
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<pre><code>$ JAVA_OPTS=&quot;-Xmx512m -Dfile.encoding=UTF-8&quot; /home/dspacetest.cgiar.org/bin/dspace import --add --eperson=aorth@mjanja.ch --collection=10568
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/79042 --source /home/aorth/CIAT_234/SimpleArchiveFormat/ --mapfile=/tmp/ciat.map &amp;&gt; /tmp/ciat.log
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<pre><code>$ JAVA_OPTS=&quot;-Xmx512m -Dfile.encoding=UTF-8&quot; /home/dspacetest.cgiar.org/bin/dspace import --add --eperson=aorth@mjanja.ch --collection=10568/79042 --source /home/aorth/CIAT_234/SimpleArchiveFormat/ --mapfile=/tmp/ciat.map &amp;&gt; /tmp/ciat.log
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</code></pre>
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<ul>
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@ -292,7 +290,19 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
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</ul>
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<pre><code>$ ./fix-metadata-values.py -i /tmp/fix-49-journal-titles.csv -f dc.source -t correct -m 55 -d dspace -u dspace -p 'password'
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</code></pre></description>
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</code></pre>
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<ul>
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<li>Create a new list of the top 500 journal titles from the database:</li>
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</ul>
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by count desc limit 500) to /tmp/journal-titles.csv with csv;
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</code></pre>
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<ul>
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<li>Then sort them in OpenRefine and create a controlled vocabulary by manually adding the XML markup, pull request (<a href="https://github.com/ilri/DSpace/pull/298">#298</a>)</li>
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<li>This would be the last issue remaining to close the meta issue about switching to controlled vocabularies (<a href="https://github.com/ilri/DSpace/pull/69">#69</a>)</li>
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</ul></description>
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</item>
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<item>
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@ -180,8 +180,7 @@ UnicodeEncodeError: 'ascii' codec can't encode character u'\xe4&
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<li>Now get the top 500 journal titles:</li>
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</ul>
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by cou
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nt desc limit 500) to /tmp/journal-titles.csv with csv;
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by count desc limit 500) to /tmp/journal-titles.csv with csv;
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</code></pre>
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<ul>
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@ -232,8 +231,7 @@ delete from collection2item where id = '91082';
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<li>Test importing of the new CIAT records (actually there are 232, not 234):</li>
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</ul>
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<pre><code>$ JAVA_OPTS=&quot;-Xmx512m -Dfile.encoding=UTF-8&quot; /home/dspacetest.cgiar.org/bin/dspace import --add --eperson=aorth@mjanja.ch --collection=10568
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/79042 --source /home/aorth/CIAT_234/SimpleArchiveFormat/ --mapfile=/tmp/ciat.map &amp;&gt; /tmp/ciat.log
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<pre><code>$ JAVA_OPTS=&quot;-Xmx512m -Dfile.encoding=UTF-8&quot; /home/dspacetest.cgiar.org/bin/dspace import --add --eperson=aorth@mjanja.ch --collection=10568/79042 --source /home/aorth/CIAT_234/SimpleArchiveFormat/ --mapfile=/tmp/ciat.map &amp;&gt; /tmp/ciat.log
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</code></pre>
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<ul>
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@ -292,7 +290,19 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
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</ul>
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<pre><code>$ ./fix-metadata-values.py -i /tmp/fix-49-journal-titles.csv -f dc.source -t correct -m 55 -d dspace -u dspace -p 'password'
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</code></pre></description>
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</code></pre>
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<ul>
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<li>Create a new list of the top 500 journal titles from the database:</li>
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</ul>
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by count desc limit 500) to /tmp/journal-titles.csv with csv;
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</code></pre>
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<ul>
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<li>Then sort them in OpenRefine and create a controlled vocabulary by manually adding the XML markup, pull request (<a href="https://github.com/ilri/DSpace/pull/298">#298</a>)</li>
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<li>This would be the last issue remaining to close the meta issue about switching to controlled vocabularies (<a href="https://github.com/ilri/DSpace/pull/69">#69</a>)</li>
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</ul></description>
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</item>
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<item>
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@ -179,8 +179,7 @@ UnicodeEncodeError: 'ascii' codec can't encode character u'\xe4&
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<li>Now get the top 500 journal titles:</li>
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</ul>
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by cou
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nt desc limit 500) to /tmp/journal-titles.csv with csv;
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by count desc limit 500) to /tmp/journal-titles.csv with csv;
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</code></pre>
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<ul>
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@ -231,8 +230,7 @@ delete from collection2item where id = '91082';
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<li>Test importing of the new CIAT records (actually there are 232, not 234):</li>
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</ul>
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<pre><code>$ JAVA_OPTS=&quot;-Xmx512m -Dfile.encoding=UTF-8&quot; /home/dspacetest.cgiar.org/bin/dspace import --add --eperson=aorth@mjanja.ch --collection=10568
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/79042 --source /home/aorth/CIAT_234/SimpleArchiveFormat/ --mapfile=/tmp/ciat.map &amp;&gt; /tmp/ciat.log
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<pre><code>$ JAVA_OPTS=&quot;-Xmx512m -Dfile.encoding=UTF-8&quot; /home/dspacetest.cgiar.org/bin/dspace import --add --eperson=aorth@mjanja.ch --collection=10568/79042 --source /home/aorth/CIAT_234/SimpleArchiveFormat/ --mapfile=/tmp/ciat.map &amp;&gt; /tmp/ciat.log
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</code></pre>
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<ul>
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@ -291,7 +289,19 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
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</ul>
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<pre><code>$ ./fix-metadata-values.py -i /tmp/fix-49-journal-titles.csv -f dc.source -t correct -m 55 -d dspace -u dspace -p 'password'
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</code></pre></description>
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</code></pre>
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<ul>
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<li>Create a new list of the top 500 journal titles from the database:</li>
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</ul>
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<pre><code>dspace-# \copy (select distinct text_value, count(*) from metadatavalue where resource_type_id=2 and metadata_field_id=55 group by text_value order by count desc limit 500) to /tmp/journal-titles.csv with csv;
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</code></pre>
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<ul>
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<li>Then sort them in OpenRefine and create a controlled vocabulary by manually adding the XML markup, pull request (<a href="https://github.com/ilri/DSpace/pull/298">#298</a>)</li>
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<li>This would be the last issue remaining to close the meta issue about switching to controlled vocabularies (<a href="https://github.com/ilri/DSpace/pull/69">#69</a>)</li>
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</ul></description>
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</item>
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<item>
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