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Add notes for 2024-10-08
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@ -21,4 +21,31 @@ $ csvcut -c 'id,dc.title[en_US],dcterms.abstract[en_US],cg.identifier.doi[en_US]
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- Then wrote a script to get them from OpenAlex
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- After inspecting and cleaning a few dozen up in OpenRefine (removing "Keywords:" and copyright, and HTML entities, etc) I managed to get about 440
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## 2024-10-06
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- Since I increase Solr's heap from 2 to 3G a few weeks ago it seems like Solr is always using 100% CPU
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- I don't understand this because it was running well before, and I only increased it in anticipation of running the dspace-statistics-api-js, though never got around to it
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- I just realized that this may be related to the JMX monitoring, as I've seen gaps in the Grafana dashboards and remember that it took surprisingly long to scrape the metrics
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- Maybe I need to change the scrape interval
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## 2024-10-08
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- I checked the VictoriaMetrics vmagent dashboard and saw that there were thousands of errors scraping the `jvm_solr` target from Solr
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- So it seems like I do need to change the scrape interval
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- I will increase it from 15s (global) to 20s for that job
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- Reading some documentation I found [this reference from Brian Brazil that discusses this very problem](https://www.robustperception.io/keep-it-simple-scrape_interval-id/)
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- He recommends keeping a single scrape interval for all targets, but also checking the slow exporter (`jmx_exporter` in this case) and seeing if we can limit the data we scrape
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- To keep things simple for now I will increase the global scrape interval to 20s
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- Long term I should limit the metrics...
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- Oh wow, I found out that [Solr ships with a Prometheus exporter!](https://solr.apache.org/guide/8_11/monitoring-solr-with-prometheus-and-grafana.html) and even includes a Grafana dashboard
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- I'm trying to run the Solr prometheus-exporter as a one-off systemd unit to test it:
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```console
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# cd /opt/solr-8.11.3/contrib/prometheus-exporter
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# systemd-run --uid=victoriametrics --gid=victoriametrics --working-directory=/opt/solr-8.11.3/contrib/prometheus-exporter ./bin/solr-exporter -p 9854 -b http://localhost:8983/solr -f ./conf/solr-exporter-config.xml -s 20
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```
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- The default scrape interval is 60 seconds, so if we scrape it more than that the metrics will be stale
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- From what I've seen this returns in less than one second so it should be safe to reduce the scrape interval
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<!-- vim: set sw=2 ts=2: -->
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@ -18,7 +18,7 @@ For copyright reasons they don’t include plain abstracts, but the pyalex l
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<meta property="og:type" content="article" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2024-10/" />
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<meta property="article:published_time" content="2024-10-03T11:01:00+03:00" />
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<meta property="article:modified_time" content="2024-10-03T11:01:00+03:00" />
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<meta property="article:modified_time" content="2024-10-03T11:51:44+03:00" />
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@ -42,9 +42,9 @@ For copyright reasons they don’t include plain abstracts, but the pyalex l
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"@type": "BlogPosting",
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"headline": "October, 2024",
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"url": "https://alanorth.github.io/cgspace-notes/2024-10/",
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"wordCount": "125",
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"wordCount": "417",
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"datePublished": "2024-10-03T11:01:00+03:00",
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"dateModified": "2024-10-03T11:01:00+03:00",
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"dateModified": "2024-10-03T11:51:44+03:00",
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"author": {
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"@type": "Person",
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"name": "Alan Orth"
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@ -137,6 +137,40 @@ For copyright reasons they don’t include plain abstracts, but the pyalex l
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</ul>
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</li>
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</ul>
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<h2 id="2024-10-06">2024-10-06</h2>
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<ul>
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<li>Since I increase Solr’s heap from 2 to 3G a few weeks ago it seems like Solr is always using 100% CPU
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<ul>
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<li>I don’t understand this because it was running well before, and I only increased it in anticipation of running the dspace-statistics-api-js, though never got around to it</li>
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<li>I just realized that this may be related to the JMX monitoring, as I’ve seen gaps in the Grafana dashboards and remember that it took surprisingly long to scrape the metrics</li>
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<li>Maybe I need to change the scrape interval</li>
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</ul>
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</li>
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</ul>
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<h2 id="2024-10-08">2024-10-08</h2>
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<ul>
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<li>I checked the VictoriaMetrics vmagent dashboard and saw that there were thousands of errors scraping the <code>jvm_solr</code> target from Solr
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<ul>
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<li>So it seems like I do need to change the scrape interval</li>
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<li>I will increase it from 15s (global) to 20s for that job</li>
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<li>Reading some documentation I found <a href="https://www.robustperception.io/keep-it-simple-scrape_interval-id/">this reference from Brian Brazil that discusses this very problem</a></li>
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<li>He recommends keeping a single scrape interval for all targets, but also checking the slow exporter (<code>jmx_exporter</code> in this case) and seeing if we can limit the data we scrape</li>
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<li>To keep things simple for now I will increase the global scrape interval to 20s</li>
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<li>Long term I should limit the metrics…</li>
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<li>Oh wow, I found out that <a href="https://solr.apache.org/guide/8_11/monitoring-solr-with-prometheus-and-grafana.html">Solr ships with a Prometheus exporter!</a> and even includes a Grafana dashboard</li>
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</ul>
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</li>
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<li>I’m trying to run the Solr prometheus-exporter as a one-off systemd unit to test it:</li>
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</ul>
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<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span># cd /opt/solr-8.11.3/contrib/prometheus-exporter
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</span></span><span style="display:flex;"><span># systemd-run --uid<span style="color:#f92672">=</span>victoriametrics --gid<span style="color:#f92672">=</span>victoriametrics --working-directory<span style="color:#f92672">=</span>/opt/solr-8.11.3/contrib/prometheus-exporter ./bin/solr-exporter -p <span style="color:#ae81ff">9854</span> -b http://localhost:8983/solr -f ./conf/solr-exporter-config.xml -s <span style="color:#ae81ff">20</span>
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</span></span></code></pre></div><ul>
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<li>The default scrape interval is 60 seconds, so if we scrape it more than that the metrics will be stale
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<ul>
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<li>From what I’ve seen this returns in less than one second so it should be safe to reduce the scrape interval</li>
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</ul>
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</li>
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</ul>
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<!-- raw HTML omitted -->
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:type" content="website" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
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<meta property="og:updated_time" content="2024-10-03T11:01:00+03:00" />
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@ -6,7 +6,7 @@
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<description>Recent content in Categories on CGSpace Notes</description>
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<generator>Hugo</generator>
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<item>
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<title>Notes</title>
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<description>Recent content in Notes on CGSpace Notes</description>
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<title>October, 2024</title>
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<title>October, 2024</title>
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:type" content="website" />
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<description>Recent content in Posts on CGSpace Notes</description>
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<generator>Hugo</generator>
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<language>en-us</language>
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<lastBuildDate>Thu, 03 Oct 2024 11:01:00 +0300</lastBuildDate>
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<atom:link href="https://alanorth.github.io/cgspace-notes/posts/index.xml" rel="self" type="application/rss+xml" />
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<item>
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<title>October, 2024</title>
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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@ -10,7 +10,7 @@
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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@ -10,7 +10,7 @@
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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@ -10,7 +10,7 @@
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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@ -10,7 +10,7 @@
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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|
@ -3,19 +3,19 @@
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|
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<lastmod>2024-09-30T07:56:53+03:00</lastmod>
|
||||
|
Loading…
Reference in New Issue
Block a user