Update notes for 2021-02-21

2021-02-21 20:37:27 +02:00 · 2021-02-21 20:37:27 +02:00 · 3be27df78e
parent a1ae013b45
commit 3be27df78e
23 changed files with 58 additions and 29 deletions
--- a/content/posts/2021-02.md
+++ b/content/posts/2021-02.md
@ -490,6 +490,17 @@ $ ./ilri/add-orcid-identifiers-csv.py -i 2021-02-17-add-tom-orcid.csv -db dspace

 ```console
 $ time chrt -b 0 ionice -c2 -n7 nice -n19 dspace index-discovery -b
+
+real    311m12.617s
+user    217m3.102s
+sys     2m37.363s
+```
+
+- Then update OAI:
+
+```console
+$ dspace oai import -c
+$ export JAVA_OPTS="-Dfile.encoding=UTF-8 -Xmx2048m"
 ```

 - Ben Hack was asking if there is a REST API query that will give him all ILRI outputs for their new Sharepoint intranet
@ -510,5 +521,11 @@ $ dspace metadata-import -e aorth@mjanja.ch -f /tmp/cifor.csv

 - The process took an hour or so!
 - I added colorized output to the csv-metadata-quality tool and tagged [version 0.4.4 on GitHub](https://github.com/ilri/csv-metadata-quality/releases/tag/v0.4.4)
+- I updated the fields in AReS Explorer and then removed the old temp index so I can start a fresh re-harvest of CGSpace:
+
+```console
+$ curl -XDELETE 'http://localhost:9200/openrxv-items-temp'
+# start indexing in AReS
+```

 <!-- vim: set sw=2 ts=2: -->
--- a/docs/2021-02/index.html
+++ b/docs/2021-02/index.html
@ -32,7 +32,7 @@ $ curl -s &#39;http://localhost:9200/openrxv-items-temp/_count?q=*&amp;pretty&#3
 <meta property="og:type" content="article" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2021-02/" />
 <meta property="article:published_time" content="2021-02-01T10:13:54+02:00" />
-<meta property="article:modified_time" content="2021-02-16T20:19:14+02:00" />
+<meta property="article:modified_time" content="2021-02-21T18:20:37+02:00" />



@ -70,9 +70,9 @@ $ curl -s &#39;http://localhost:9200/openrxv-items-temp/_count?q=*&amp;pretty&#3
  "@type": "BlogPosting",
  "headline": "February, 2021",
  "url": "https://alanorth.github.io/cgspace-notes/2021-02/",
-  "wordCount": "3061",
+  "wordCount": "3111",
  "datePublished": "2021-02-01T10:13:54+02:00",
-  "dateModified": "2021-02-16T20:19:14+02:00",
+  "dateModified": "2021-02-21T18:20:37+02:00",
  "author": {
    "@type": "Person",
    "name": "Alan Orth"
@ -642,6 +642,15 @@ $ ./ilri/add-orcid-identifiers-csv.py -i 2021-02-17-add-tom-orcid.csv -db dspace
 <li>After deploying the latest <code>6_x-prod</code> branch and running <code>migrate-fields.sh</code> I started a full Discovery reindex:</li>
 </ul>
 <pre><code class="language-console" data-lang="console">$ time chrt -b 0 ionice -c2 -n7 nice -n19 dspace index-discovery -b
+
+real    311m12.617s
+user    217m3.102s
+sys     2m37.363s
+</code></pre><ul>
+<li>Then update OAI:</li>
+</ul>
+<pre><code class="language-console" data-lang="console">$ dspace oai import -c
+$ export JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx2048m&quot;
 </code></pre><ul>
 <li>Ben Hack was asking if there is a REST API query that will give him all ILRI outputs for their new Sharepoint intranet
 <ul>
@ -665,8 +674,11 @@ $ dspace metadata-import -e aorth@mjanja.ch -f /tmp/cifor.csv
 </code></pre><ul>
 <li>The process took an hour or so!</li>
 <li>I added colorized output to the csv-metadata-quality tool and tagged <a href="https://github.com/ilri/csv-metadata-quality/releases/tag/v0.4.4">version 0.4.4 on GitHub</a></li>
+<li>I updated the fields in AReS Explorer and then removed the old temp index so I can start a fresh re-harvest of CGSpace:</li>
 </ul>
-<!-- raw HTML omitted -->
+<pre><code class="language-console" data-lang="console">$ curl -XDELETE 'http://localhost:9200/openrxv-items-temp'
+# start indexing in AReS
+</code></pre><!-- raw HTML omitted -->

  

--- a/docs/categories/index.html
+++ b/docs/categories/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2021-02-16T20:19:14+02:00" />
+<meta property="og:updated_time" content="2021-02-21T18:20:37+02:00" />



--- a/docs/categories/notes/index.html
+++ b/docs/categories/notes/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2021-02-16T20:19:14+02:00" />
+<meta property="og:updated_time" content="2021-02-21T18:20:37+02:00" />



--- a/docs/categories/notes/page/2/index.html
+++ b/docs/categories/notes/page/2/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2021-02-16T20:19:14+02:00" />
+<meta property="og:updated_time" content="2021-02-21T18:20:37+02:00" />



--- a/docs/categories/notes/page/3/index.html
+++ b/docs/categories/notes/page/3/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2021-02-16T20:19:14+02:00" />
+<meta property="og:updated_time" content="2021-02-21T18:20:37+02:00" />



--- a/docs/categories/notes/page/4/index.html
+++ b/docs/categories/notes/page/4/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2021-02-16T20:19:14+02:00" />
+<meta property="og:updated_time" content="2021-02-21T18:20:37+02:00" />



--- a/docs/categories/notes/page/5/index.html
+++ b/docs/categories/notes/page/5/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2021-02-16T20:19:14+02:00" />
+<meta property="og:updated_time" content="2021-02-21T18:20:37+02:00" />



--- a/docs/index.html
+++ b/docs/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2021-02-16T20:19:14+02:00" />
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--- a/docs/page/2/index.html
+++ b/docs/page/2/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2021-02-16T20:19:14+02:00" />
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--- a/docs/page/3/index.html
+++ b/docs/page/3/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2021-02-16T20:19:14+02:00" />
+<meta property="og:updated_time" content="2021-02-21T18:20:37+02:00" />



--- a/docs/page/4/index.html
+++ b/docs/page/4/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
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--- a/docs/page/5/index.html
+++ b/docs/page/5/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
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--- a/docs/page/6/index.html
+++ b/docs/page/6/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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--- a/docs/page/7/index.html
+++ b/docs/page/7/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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--- a/docs/posts/index.html
+++ b/docs/posts/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
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--- a/docs/posts/page/2/index.html
+++ b/docs/posts/page/2/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
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--- a/docs/posts/page/3/index.html
+++ b/docs/posts/page/3/index.html
@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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--- a/docs/posts/page/4/index.html
+++ b/docs/posts/page/4/index.html
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--- a/docs/posts/page/5/index.html
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 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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--- a/docs/posts/page/6/index.html
+++ b/docs/posts/page/6/index.html
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 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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--- a/docs/posts/page/7/index.html
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 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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--- a/docs/sitemap.xml
+++ b/docs/sitemap.xml
@ -4,27 +4,27 @@
  
  <url>
    <loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
-    <lastmod>2021-02-16T20:19:14+02:00</lastmod>
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  <url>
    <loc>https://alanorth.github.io/cgspace-notes/</loc>
-    <lastmod>2021-02-16T20:19:14+02:00</lastmod>
+    <lastmod>2021-02-21T18:20:37+02:00</lastmod>
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  <url>
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-    <lastmod>2021-02-16T20:19:14+02:00</lastmod>
+    <lastmod>2021-02-21T18:20:37+02:00</lastmod>
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