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Add notes for 2017-08-08

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Alan Orth 2017-08-08 12:04:22 +03:00
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6
content/post/2017-08.md
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@ -48,3 +48,9 @@ tags = ["Notes"]
- Apply Abenet's corrections for the CGIAR Library's Consortium subcommunity (697 records)
- I had to fix a few small things, like moving the `dc.title` column away from the beginning of the row, delete blank spaces in the abstract in vim using `:g/^$/d`, add the `dc.subject[en_US]` column back, as she had deleted it and DSpace didn't detect the changes made there (we needed to blank the values instead)
## 2017-08-08
- Apply Abenet's corrections for the CGIAR Library's historic archive subcommunity (2415 records)
- I had to add the `dc.subject[en_US]` column back with blank values so that DSpace could detect the changes
- I applied the changes in 500 item batches

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public/2015-11/index.html
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@ -37,14 +37,7 @@ $ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspac
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="November, 2015"/>
<meta name="twitter:title" content="November, 2015"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="November, 2015"/>
<meta name="twitter:description" content="2015-11-22
@ -58,8 +51,7 @@ $ psql -c &#39;SELECT * from pg_stat_activity;&#39; | grep idle | grep -c cgspac
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />

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@ -38,14 +38,7 @@ Replace lzop with xz in log compression cron jobs on DSpace Test—it uses less
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="December, 2015"/>
<meta name="twitter:title" content="December, 2015"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="December, 2015"/>
<meta name="twitter:description" content="2015-12-02
@ -60,8 +53,7 @@ Replace lzop with xz in log compression cron jobs on DSpace Test—it uses less
"/>
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public/2016-01/index.html
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@ -33,14 +33,7 @@ Update GitHub wiki for documentation of maintenance tasks.
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="January, 2016"/>
<meta name="twitter:title" content="January, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="January, 2016"/>
<meta name="twitter:description" content="2016-01-13
@ -50,8 +43,7 @@ Update GitHub wiki for documentation of maintenance tasks.
"/>
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public/2016-02/index.html
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@ -40,14 +40,7 @@ Also, lots of things like &ldquo;COTE D`LVOIRE&rdquo; and &ldquo;COTE D IVOIRE&r
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="February, 2016"/>
<meta name="twitter:title" content="February, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="February, 2016"/>
<meta name="twitter:description" content="2016-02-05
@ -64,8 +57,7 @@ Also, lots of things like &ldquo;COTE D`LVOIRE&rdquo; and &ldquo;COTE D IVOIRE&r
"/>
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public/2016-03/index.html
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@ -33,14 +33,7 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="March, 2016"/>
<meta name="twitter:title" content="March, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="March, 2016"/>
<meta name="twitter:description" content="2016-03-02
@ -50,8 +43,7 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
"/>
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<meta name="generator" content="Hugo 0.26" />

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public/2016-04/index.html
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@ -35,14 +35,7 @@ Also, I noticed the checker log has some errors we should pay attention to:
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="April, 2016"/>
<meta name="twitter:title" content="April, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="April, 2016"/>
<meta name="twitter:description" content="2016-04-04
@ -54,8 +47,7 @@ Also, I noticed the checker log has some errors we should pay attention to:
"/>
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<meta name="generator" content="Hugo 0.26" />

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public/2016-05/index.html
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@ -37,14 +37,7 @@ There are 3,000 IPs accessing the REST API in a 24-hour period!
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="May, 2016"/>
<meta name="twitter:title" content="May, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="May, 2016"/>
<meta name="twitter:description" content="2016-05-01
@ -58,8 +51,7 @@ There are 3,000 IPs accessing the REST API in a 24-hour period!
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />

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public/2016-06/index.html
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@ -36,14 +36,7 @@ Working on second phase of metadata migration, looks like this will work for mov
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="June, 2016"/>
<meta name="twitter:title" content="June, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="June, 2016"/>
<meta name="twitter:description" content="2016-06-01
@ -56,8 +49,7 @@ Working on second phase of metadata migration, looks like this will work for mov
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />

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@ -44,14 +44,7 @@ In this case the select query was showing 95 results before the update
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="July, 2016"/>
<meta name="twitter:title" content="July, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="July, 2016"/>
<meta name="twitter:description" content="2016-07-01
@ -72,8 +65,7 @@ In this case the select query was showing 95 results before the update
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />

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public/2016-08/index.html
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@ -41,14 +41,7 @@ $ git rebase -i dspace-5.5
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="August, 2016"/>
<meta name="twitter:title" content="August, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="August, 2016"/>
<meta name="twitter:description" content="2016-08-01
@ -66,8 +59,7 @@ $ git rebase -i dspace-5.5
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />

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@ -37,14 +37,7 @@ $ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b &quot;dc=cgiarad,dc=or
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="September, 2016"/>
<meta name="twitter:title" content="September, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="September, 2016"/>
<meta name="twitter:description" content="2016-09-01
@ -58,8 +51,7 @@ $ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b &quot;dc=cgiarad,dc=or
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />

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@ -41,14 +41,7 @@ I exported a random item&rsquo;s metadata as CSV, deleted all columns except id
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="October, 2016"/>
<meta name="twitter:title" content="October, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="October, 2016"/>
<meta name="twitter:description" content="2016-10-03
@ -66,8 +59,7 @@ I exported a random item&rsquo;s metadata as CSV, deleted all columns except id
"/>
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public/2016-11/index.html
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@ -33,14 +33,7 @@ Add dc.type to the output options for Atmire&rsquo;s Listings and Reports module
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="November, 2016"/>
<meta name="twitter:title" content="November, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="November, 2016"/>
<meta name="twitter:description" content="2016-11-01
@ -50,8 +43,7 @@ Add dc.type to the output options for Atmire&rsquo;s Listings and Reports module
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />

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public/2016-12/index.html
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@ -45,14 +45,7 @@ Another worrying error from dspace.log is:
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="December, 2016"/>
<meta name="twitter:title" content="December, 2016"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="December, 2016"/>
<meta name="twitter:description" content="2016-12-02
@ -74,8 +67,7 @@ Another worrying error from dspace.log is:
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />

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public/2017-01/index.html
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@ -33,14 +33,7 @@ I asked on the dspace-tech mailing list because it seems to be broken, and actua
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="January, 2017"/>
<meta name="twitter:title" content="January, 2017"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="January, 2017"/>
<meta name="twitter:description" content="2017-01-02
@ -50,8 +43,7 @@ I asked on the dspace-tech mailing list because it seems to be broken, and actua
"/>
<meta name="generator" content="Hugo 0.25.1" />
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public/2017-02/index.html
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@ -47,14 +47,7 @@ Looks like we&rsquo;ll be using cg.identifier.ccafsprojectpii as the field name
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="February, 2017"/>
<meta name="twitter:title" content="February, 2017"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="February, 2017"/>
<meta name="twitter:description" content="2017-02-07
@ -78,8 +71,7 @@ Looks like we&rsquo;ll be using cg.identifier.ccafsprojectpii as the field name
"/>
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<meta name="generator" content="Hugo 0.26" />

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public/2017-03/index.html
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@ -49,14 +49,7 @@ $ identify ~/Desktop/alc_contrastes_desafios.jpg
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="March, 2017"/>
<meta name="twitter:title" content="March, 2017"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="March, 2017"/>
<meta name="twitter:description" content="2017-03-01
@ -82,8 +75,7 @@ $ identify ~/Desktop/alc_contrastes_desafios.jpg
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />

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public/2017-04/index.html
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@ -42,14 +42,7 @@ $ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Th
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="April, 2017"/>
<meta name="twitter:title" content="April, 2017"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="April, 2017"/>
<meta name="twitter:description" content="2017-04-02
@ -68,8 +61,7 @@ $ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Th
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />

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public/2017-05/index.html
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@ -25,17 +25,9 @@
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="May, 2017"/>
<meta name="twitter:title" content="May, 2017"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="May, 2017"/>
<meta name="twitter:description" content="2017-05-01 ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items: https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683 2017-05-02 Atmire got back about the Workflow Statistics issue, and apparently it&rsquo;s a bug in the CUA module so they will send us a pull request 2017-05-04 Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire&rsquo;s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace."/>
<meta name="generator" content="Hugo 0.25.1" />
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public/2017-06/index.html
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@ -25,17 +25,9 @@
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="June, 2017"/>
<meta name="twitter:title" content="June, 2017"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="June, 2017"/>
<meta name="twitter:description" content="2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg."/>
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@ -39,14 +39,7 @@ We can use PostgreSQL&rsquo;s extended output format (-x) plus sed to format the
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="July, 2017"/>
<meta name="twitter:title" content="July, 2017"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="July, 2017"/>
<meta name="twitter:description" content="2017-07-01
@ -62,8 +55,7 @@ We can use PostgreSQL&rsquo;s extended output format (-x) plus sed to format the
"/>
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public/2017-08/index.html
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@ -37,7 +37,7 @@ Then I cleaned up the author authorities and HTML characters in OpenRefine and s
<meta property="article:published_time" content="2017-08-01T11:51:52&#43;03:00"/>
<meta property="article:modified_time" content="2017-08-05T17:24:05&#43;03:00"/>
<meta property="article:modified_time" content="2017-08-07T16:09:11&#43;03:00"/>
@ -49,14 +49,7 @@ Then I cleaned up the author authorities and HTML characters in OpenRefine and s
<meta name="twitter:card" content="summary"/>
<meta name="twitter:text:title" content="August, 2017"/>
<meta name="twitter:title" content="August, 2017"/>
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="August, 2017"/>
<meta name="twitter:description" content="2017-08-01
@ -82,8 +75,7 @@ Then I cleaned up the author authorities and HTML characters in OpenRefine and s
"/>
<meta name="generator" content="Hugo 0.25.1" />
<meta name="generator" content="Hugo 0.26" />
@ -93,9 +85,9 @@ Then I cleaned up the author authorities and HTML characters in OpenRefine and s
"@type": "BlogPosting",
"headline": "August, 2017",
"url": "https://alanorth.github.io/cgspace-notes/2017-08/",
"wordCount": "557",
"wordCount": "596",
"datePublished": "2017-08-01T11:51:52&#43;03:00",
"dateModified": "2017-08-05T17:24:05&#43;03:00",
"dateModified": "2017-08-07T16:09:11&#43;03:00",
"author": {
"@type": "Person",
"name": "Alan Orth"
@ -215,6 +207,14 @@ Then I cleaned up the author authorities and HTML characters in OpenRefine and s
<li>I had to fix a few small things, like moving the <code>dc.title</code> column away from the beginning of the row, delete blank spaces in the abstract in vim using <code>:g/^$/d</code>, add the <code>dc.subject[en_US]</code> column back, as she had deleted it and DSpace didn&rsquo;t detect the changes made there (we needed to blank the values instead)</li>
</ul>
<h2 id="2017-08-08">2017-08-08</h2>
<ul>
<li>Apply Abenet&rsquo;s corrections for the CGIAR Library&rsquo;s historic archive subcommunity (2415 records)</li>
<li>I had to add the <code>dc.subject[en_US]</code> column back with blank values so that DSpace could detect the changes</li>
<li>I applied the changes in 500 item batches</li>
</ul>

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@ -23,7 +23,9 @@
<meta name="generator" content="Hugo 0.25.1" />
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="CGSpace Notes"/>
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
<meta name="generator" content="Hugo 0.26" />

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@ -23,7 +23,9 @@
<meta name="generator" content="Hugo 0.25.1" />
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="CGSpace Notes"/>
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
<meta name="generator" content="Hugo 0.26" />

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@ -23,7 +23,9 @@
<meta name="generator" content="Hugo 0.25.1" />
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="CGSpace Notes"/>
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
<meta name="generator" content="Hugo 0.26" />

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@ -23,7 +23,9 @@
<meta name="generator" content="Hugo 0.25.1" />
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="Posts"/>
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
<meta name="generator" content="Hugo 0.26" />

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@ -23,7 +23,9 @@
<meta name="generator" content="Hugo 0.25.1" />
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="Posts"/>
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
<meta name="generator" content="Hugo 0.26" />

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@ -23,7 +23,9 @@
<meta name="generator" content="Hugo 0.25.1" />
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="Posts"/>
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
<meta name="generator" content="Hugo 0.26" />

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@ -4,7 +4,7 @@
<url>
<loc>https://alanorth.github.io/cgspace-notes/2017-08/</loc>
<lastmod>2017-08-05T17:24:05+03:00</lastmod>
<lastmod>2017-08-07T16:09:11+03:00</lastmod>
</url>
<url>
@ -114,7 +114,7 @@
<url>
<loc>https://alanorth.github.io/cgspace-notes/</loc>
<lastmod>2017-08-05T17:24:05+03:00</lastmod>
<lastmod>2017-08-07T16:09:11+03:00</lastmod>
<priority>0</priority>
</url>
@ -125,19 +125,19 @@
<url>
<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
<lastmod>2017-08-05T17:24:05+03:00</lastmod>
<lastmod>2017-08-07T16:09:11+03:00</lastmod>
<priority>0</priority>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/post/</loc>
<lastmod>2017-08-05T17:24:05+03:00</lastmod>
<lastmod>2017-08-07T16:09:11+03:00</lastmod>
<priority>0</priority>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
<lastmod>2017-08-05T17:24:05+03:00</lastmod>
<lastmod>2017-08-07T16:09:11+03:00</lastmod>
<priority>0</priority>
</url>

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@ -23,7 +23,9 @@
<meta name="generator" content="Hugo 0.25.1" />
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="Notes"/>
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
<meta name="generator" content="Hugo 0.26" />

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@ -23,7 +23,9 @@
<meta name="generator" content="Hugo 0.25.1" />
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="Notes"/>
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
<meta name="generator" content="Hugo 0.26" />

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@ -23,7 +23,9 @@
<meta name="generator" content="Hugo 0.25.1" />
<meta name="twitter:card" content="summary"/><meta name="twitter:title" content="Notes"/>
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
<meta name="generator" content="Hugo 0.26" />