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Add notes for 2020-06-02

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Alan Orth 2020-06-02 15:12:32 +03:00
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46
content/posts/2020-06.md
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@ -1,6 +1,6 @@
---
title: "June, 2020"
date: 2020-05-01T13:55:39+03:00
date: 2020-06-01T13:55:39+03:00
author: "Alan Orth"
categories: ["Notes"]
---
@ -38,4 +38,48 @@ java.lang.NullPointerException
at org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:81)
```
## 2020-06-02
- I noticed that I was able to do a partial OAI import (ie, without `-c`)
- Then I tried to clear the OAI Solr core and import, but I get the same error:
```
$ curl http://localhost:8080/solr/oai/update -H "Content-type: text/xml" --data-binary '<delete><query>*:*</query></delete>'
$ curl http://localhost:8080/solr/oai/update -H "Content-type: text/xml" --data-binary '<commit />'
$ ~/dspace63/bin/dspace oai import
OAI 2.0 manager action started
...
There are no indexed documents, using full import.
Full import
java.lang.NullPointerException
at org.dspace.xoai.app.XOAI.willChangeStatus(XOAI.java:438)
at org.dspace.xoai.app.XOAI.index(XOAI.java:368)
at org.dspace.xoai.app.XOAI.index(XOAI.java:280)
at org.dspace.xoai.app.XOAI.indexAll(XOAI.java:227)
at org.dspace.xoai.app.XOAI.index(XOAI.java:143)
at org.dspace.xoai.app.XOAI.main(XOAI.java:560)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.java:229)
at org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:81)
```
- I found a [bug report on DSpace Jira](https://jira.lyrasis.org/browse/DS-4363) describing this issue affecting someone else running DSpace 6.3
- They suspect it has to do with the item having some missing group names in its authorization policies
- I added some debugging to `dspace-oai/src/main/java/org/dspace/xoai/app/XOAI.java` to print the Handle of the item that causes the crash and then I looked at its authorization policies
- Indeed there are some blank group names:
![Missing group names in DSpace 6.3 item authorization policy](/cgspace-notes/2020/06/item-authorizations-dspace63.png)
- The same item on CGSpace (DSpace 5.8) also has groups with no name:
![Missing group names in DSpace 5.8 item authorization policy](/cgspace-notes/2020/06/item-authorizations-dspace58.png)
- I added some debugging and found exactly where this happens
- As it turns out we can just check if the group policy is null there and it allows the OAI import to proceed
- Aaaaand as it turns out, this was fixed in `dspace-6_x` in 2018 after DSpace 6.3 was released (see [DS-4019](https://jira.lyrasis.org/browse/DS-4019)), so that was a waste of three hours.
- I cherry picked 150e83558103ed7f50e8f323b6407b9cbdf33717 into our current `6_x-dev-atmire-modules` branch
<!-- vim: set sw=2 ts=2: -->

4
docs/2015-11/index.html
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@ -239,9 +239,9 @@ db.statementpool = true
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2015-12/index.html
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@ -261,9 +261,9 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-01/index.html
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@ -197,9 +197,9 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} ; | sor
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-02/index.html
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@ -375,9 +375,9 @@ Bitstream: tést señora alimentación.pdf
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-03/index.html
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@ -313,9 +313,9 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-04/index.html
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@ -492,9 +492,9 @@ dspace.log.2016-04-27:7271
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-05/index.html
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@ -368,9 +368,9 @@ sys 0m20.540s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-06/index.html
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@ -406,9 +406,9 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-07/index.html
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@ -322,9 +322,9 @@ discovery.index.authority.ignore-variants=true
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-08/index.html
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@ -386,9 +386,9 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-09/index.html
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@ -603,9 +603,9 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-10/index.html
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@ -369,9 +369,9 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-11/index.html
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@ -545,9 +545,9 @@ org.dspace.discovery.SearchServiceException: Error executing query
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2016-12/index.html
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@ -781,9 +781,9 @@ $ exit
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-01/index.html
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@ -366,9 +366,9 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-02/index.html
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@ -421,9 +421,9 @@ COPY 1968
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-03/index.html
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@ -352,9 +352,9 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-04/index.html
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@ -582,9 +582,9 @@ $ gem install compass -v 1.0.3
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-05/index.html
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@ -388,9 +388,9 @@ UPDATE 187
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-06/index.html
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@ -267,9 +267,9 @@ $ JAVA_OPTS=&quot;-Xmx1024m -Dfile.encoding=UTF-8&quot; [dspace]/bin/dspace impo
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-07/index.html
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@ -272,9 +272,9 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-08/index.html
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@ -514,9 +514,9 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-09/index.html
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@ -656,9 +656,9 @@ Cert Status: good
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-10/index.html
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@ -440,9 +440,9 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-11/index.html
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@ -941,9 +941,9 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2017-12/index.html
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@ -780,9 +780,9 @@ DELETE 20
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-01/index.html
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@ -1449,9 +1449,9 @@ Catalina:type=Manager,context=/,host=localhost activeSessions 8
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-02/index.html
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@ -1036,9 +1036,9 @@ UPDATE 3
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-03/index.html
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@ -582,9 +582,9 @@ Fixed 5 occurences of: GENEBANKS
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-04/index.html
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@ -591,9 +591,9 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-05/index.html
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@ -520,9 +520,9 @@ $ psql -h localhost -U postgres dspacetest
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-06/index.html
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@ -514,9 +514,9 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-07/index.html
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@ -566,9 +566,9 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-08/index.html
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@ -439,9 +439,9 @@ $ dspace database migrate ignored
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-09/index.html
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@ -745,9 +745,9 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-10/index.html
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@ -653,9 +653,9 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-11/index.html
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@ -550,9 +550,9 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2018-12/index.html
View File

@ -591,9 +591,9 @@ UPDATE 1
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-01/index.html
View File

@ -1261,9 +1261,9 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-02/index.html
View File

@ -1341,9 +1341,9 @@ Please see the DSpace documentation for assistance.
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-03/index.html
View File

@ -1205,9 +1205,9 @@ sys 0m2.551s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-04/index.html
View File

@ -1296,9 +1296,9 @@ UPDATE 14
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-05/index.html
View File

@ -628,9 +628,9 @@ COPY 64871
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-06/index.html
View File

@ -314,9 +314,9 @@ UPDATE 2
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-07/index.html
View File

@ -551,9 +551,9 @@ issn.validate('1020-3362')
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-08/index.html
View File

@ -570,9 +570,9 @@ sys 2m27.496s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-09/index.html
View File

@ -578,9 +578,9 @@ $ csv-metadata-quality -i /tmp/clarisa-institutions.csv -o /tmp/clarisa-institut
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-10/index.html
View File

@ -382,9 +382,9 @@ $ dspace import -a -c 10568/104057 -e fuu@cgiar.org -m 2019-10-15-Bioversity.map
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-11/index.html
View File

@ -689,9 +689,9 @@ $ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-i
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2019-12/index.html
View File

@ -401,9 +401,9 @@ UPDATE 1
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2020-01/index.html
View File

@ -601,9 +601,9 @@ COPY 2900
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2020-02/index.html
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@ -1272,9 +1272,9 @@ Moving: 21993 into core statistics-2019
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2020-03/index.html
View File

@ -481,9 +481,9 @@ $ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-i
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2020-04/index.html
View File

@ -655,9 +655,9 @@ $ psql -c 'select * from pg_stat_activity' | wc -l
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/2020-05/index.html
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@ -474,9 +474,9 @@ Caused by: java.lang.NullPointerException
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

276
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@ -0,0 +1,276 @@
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<meta property="og:description" content="2020-06-01
I tried to run the AtomicStatisticsUpdateCLI CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
I sent Atmire the dspace.log from today and told them to log into the server to debug the process
In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working
I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:
" />
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<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="June, 2020"/>
<meta name="twitter:description" content="2020-06-01
I tried to run the AtomicStatisticsUpdateCLI CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
I sent Atmire the dspace.log from today and told them to log into the server to debug the process
In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working
I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:
"/>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-06/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-06-01T13:55:39+03:00">Mon Jun 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<pre><code>$ dspace oai import -c
OAI 2.0 manager action started
Loading @mire database changes for module MQM
Changes have been processed
Clearing index
Index cleared
Using full import.
Full import
java.lang.NullPointerException
at org.dspace.xoai.app.XOAI.willChangeStatus(XOAI.java:438)
at org.dspace.xoai.app.XOAI.index(XOAI.java:368)
at org.dspace.xoai.app.XOAI.index(XOAI.java:280)
at org.dspace.xoai.app.XOAI.indexAll(XOAI.java:227)
at org.dspace.xoai.app.XOAI.index(XOAI.java:134)
at org.dspace.xoai.app.XOAI.main(XOAI.java:560)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.java:229)
at org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:81)
</code></pre><h2 id="2020-06-02">2020-06-02</h2>
<ul>
<li>I noticed that I was able to do a partial OAI import (ie, without <code>-c</code>)
<ul>
<li>Then I tried to clear the OAI Solr core and import, but I get the same error:</li>
</ul>
</li>
</ul>
<pre><code>$ curl http://localhost:8080/solr/oai/update -H &quot;Content-type: text/xml&quot; --data-binary '&lt;delete&gt;&lt;query&gt;*:*&lt;/query&gt;&lt;/delete&gt;'
$ curl http://localhost:8080/solr/oai/update -H &quot;Content-type: text/xml&quot; --data-binary '&lt;commit /&gt;'
$ ~/dspace63/bin/dspace oai import
OAI 2.0 manager action started
...
There are no indexed documents, using full import.
Full import
java.lang.NullPointerException
at org.dspace.xoai.app.XOAI.willChangeStatus(XOAI.java:438)
at org.dspace.xoai.app.XOAI.index(XOAI.java:368)
at org.dspace.xoai.app.XOAI.index(XOAI.java:280)
at org.dspace.xoai.app.XOAI.indexAll(XOAI.java:227)
at org.dspace.xoai.app.XOAI.index(XOAI.java:143)
at org.dspace.xoai.app.XOAI.main(XOAI.java:560)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.java:229)
at org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:81)
</code></pre><ul>
<li>I found a <a href="https://jira.lyrasis.org/browse/DS-4363">bug report on DSpace Jira</a> describing this issue affecting someone else running DSpace 6.3
<ul>
<li>They suspect it has to do with the item having some missing group names in its authorization policies</li>
<li>I added some debugging to <code>dspace-oai/src/main/java/org/dspace/xoai/app/XOAI.java</code> to print the Handle of the item that causes the crash and then I looked at its authorization policies</li>
<li>Indeed there are some blank group names:</li>
</ul>
</li>
</ul>
<p><img src="/cgspace-notes/2020/06/item-authorizations-dspace63.png" alt="Missing group names in DSpace 6.3 item authorization policy"></p>
<ul>
<li>The same item on CGSpace (DSpace 5.8) also has groups with no name:</li>
</ul>
<p><img src="/cgspace-notes/2020/06/item-authorizations-dspace58.png" alt="Missing group names in DSpace 5.8 item authorization policy"></p>
<ul>
<li>I added some debugging and found exactly where this happens
<ul>
<li>As it turns out we can just check if the group policy is null there and it allows the OAI import to proceed</li>
<li>Aaaaand as it turns out, this was fixed in <code>dspace-6_x</code> in 2018 after DSpace 6.3 was released (see <a href="https://jira.lyrasis.org/browse/DS-4019">DS-4019</a>), so that was a waste of three hours.</li>
<li>I cherry picked 150e83558103ed7f50e8f323b6407b9cbdf33717 into our current <code>6_x-dev-atmire-modules</code> branch</li>
</ul>
</li>
</ul>
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<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>
<li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
<li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
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<h4>Links</h4>
<ol class="list-unstyled">
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
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<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
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@ -94,9 +94,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

62
docs/categories/index.html
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@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
"@type": "Person",
"name": "Alan Orth"
},
"dateModified": "2020-05-02T09:52:04+03:00",
"dateModified": "2020-06-01T13:55:39+03:00",
"keywords": "notes,""migration,""notes,",
"description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
}
@ -95,6 +95,33 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-06/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-06-01T13:55:39+03:00">Mon Jun 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2020-06/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-05/">May, 2020</a></h2>
@ -121,33 +148,6 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-05/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-05-01T13:55:39+03:00">Fri May 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2020-05/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-04/">April, 2020</a></h2>
@ -408,9 +408,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/categories/index.xml
View File

@ -6,7 +6,7 @@
<description>Recent content in Categories on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator>
<language>en-us</language>
<lastBuildDate>Sat, 02 May 2020 09:52:04 +0300</lastBuildDate>
<lastBuildDate>Mon, 01 Jun 2020 13:55:39 +0300</lastBuildDate>
<atom:link href="https://alanorth.github.io/cgspace-notes/categories/index.xml" rel="self" type="application/rss+xml" />
@ -14,7 +14,7 @@
<item>
<title>Notes</title>
<link>https://alanorth.github.io/cgspace-notes/categories/notes/</link>
<pubDate>Sat, 02 May 2020 09:52:04 +0300</pubDate>
<pubDate>Mon, 01 Jun 2020 13:55:39 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/categories/notes/</guid>
<description></description>

60
docs/categories/notes/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/>
@ -80,6 +80,33 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-06/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-06-01T13:55:39+03:00">Mon Jun 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2020-06/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-05/">May, 2020</a></h2>
@ -106,33 +133,6 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-05/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-05-01T13:55:39+03:00">Fri May 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2020-05/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-04/">April, 2020</a></h2>
@ -393,9 +393,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

38
docs/categories/notes/index.xml
View File

@ -6,11 +6,29 @@
<description>Recent content in Notes on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator>
<language>en-us</language>
<lastBuildDate>Sat, 02 May 2020 09:52:04 +0300</lastBuildDate>
<lastBuildDate>Mon, 01 Jun 2020 13:55:39 +0300</lastBuildDate>
<atom:link href="https://alanorth.github.io/cgspace-notes/categories/notes/index.xml" rel="self" type="application/rss+xml" />
<item>
<title>June, 2020</title>
<link>https://alanorth.github.io/cgspace-notes/2020-06/</link>
<pubDate>Mon, 01 Jun 2020 13:55:39 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2020-06/</guid>
<description>&lt;h2 id=&#34;2020-06-01&#34;&gt;2020-06-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I tried to run the &lt;code&gt;AtomicStatisticsUpdateCLI&lt;/code&gt; CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
&lt;ul&gt;
&lt;li&gt;I sent Atmire the dspace.log from today and told them to log into the server to debug the process&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;li&gt;In other news, I checked the statistics API on DSpace 6 and it&amp;rsquo;s working&lt;/li&gt;
&lt;li&gt;I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>May, 2020</title>
<link>https://alanorth.github.io/cgspace-notes/2020-05/</link>
@ -28,24 +46,6 @@
&lt;/ul&gt;</description>
</item>
<item>
<title>June, 2020</title>
<link>https://alanorth.github.io/cgspace-notes/2020-05/</link>
<pubDate>Fri, 01 May 2020 13:55:39 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2020-05/</guid>
<description>&lt;h2 id=&#34;2020-06-01&#34;&gt;2020-06-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I tried to run the &lt;code&gt;AtomicStatisticsUpdateCLI&lt;/code&gt; CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
&lt;ul&gt;
&lt;li&gt;I sent Atmire the dspace.log from today and told them to log into the server to debug the process&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;li&gt;In other news, I checked the statistics API on DSpace 6 and it&amp;rsquo;s working&lt;/li&gt;
&lt;li&gt;I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>April, 2020</title>
<link>https://alanorth.github.io/cgspace-notes/2020-04/</link>

6
docs/categories/notes/page/2/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/>
@ -446,9 +446,9 @@ sys 0m1.979s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

6
docs/categories/notes/page/3/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/>
@ -368,9 +368,9 @@ sys 2m7.289s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

6
docs/categories/notes/page/4/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/>
@ -290,9 +290,9 @@ COPY 54701
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/categories/page/2/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
"@type": "Person",
"name": "Alan Orth"
},
"dateModified": "2020-05-02T09:52:04+03:00",
"dateModified": "2020-06-01T13:55:39+03:00",
"keywords": "notes,""migration,""notes,",
"description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
}
@ -461,9 +461,9 @@ sys 0m1.979s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/categories/page/3/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
"@type": "Person",
"name": "Alan Orth"
},
"dateModified": "2020-05-02T09:52:04+03:00",
"dateModified": "2020-06-01T13:55:39+03:00",
"keywords": "notes,""migration,""notes,",
"description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
}
@ -383,9 +383,9 @@ sys 2m7.289s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/categories/page/4/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
"@type": "Person",
"name": "Alan Orth"
},
"dateModified": "2020-05-02T09:52:04+03:00",
"dateModified": "2020-06-01T13:55:39+03:00",
"keywords": "notes,""migration,""notes,",
"description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
}
@ -432,9 +432,9 @@ COPY 54701
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/categories/page/5/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
"@type": "Person",
"name": "Alan Orth"
},
"dateModified": "2020-05-02T09:52:04+03:00",
"dateModified": "2020-06-01T13:55:39+03:00",
"keywords": "notes,""migration,""notes,",
"description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
}
@ -411,9 +411,9 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/categories/page/6/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/>
@ -28,7 +28,7 @@
"@type": "Person",
"name": "Alan Orth"
},
"dateModified": "2020-05-02T09:52:04+03:00",
"dateModified": "2020-06-01T13:55:39+03:00",
"keywords": "notes,""migration,""notes,",
"description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
}
@ -322,9 +322,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/cgiar-library-migration/index.html
View File

@ -279,9 +279,9 @@ dspace=# select setval('handle_seq',86873);
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/cgspace-cgcorev2-migration/index.html
View File

@ -451,9 +451,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

62
docs/index.html
View File

@ -9,7 +9,7 @@
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
<meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2020-06-01T13:55:08+03:00" />
<meta property="og:updated_time" content="2020-06-01T17:08:25+03:00" />
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
"@type": "Person",
"name": "Alan Orth"
},
"dateModified": "2020-05-02T09:52:04+03:00",
"dateModified": "2020-06-01T13:55:39+03:00",
"keywords": "notes,""migration,""notes,",
"description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
}
@ -95,6 +95,33 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-06/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-06-01T13:55:39+03:00">Mon Jun 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2020-06/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-05/">May, 2020</a></h2>
@ -121,33 +148,6 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-05/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-05-01T13:55:39+03:00">Fri May 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2020-05/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-04/">April, 2020</a></h2>
@ -408,9 +408,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

38
docs/index.xml
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@ -6,11 +6,29 @@
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<description>&lt;h2 id=&#34;2020-06-01&#34;&gt;2020-06-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I tried to run the &lt;code&gt;AtomicStatisticsUpdateCLI&lt;/code&gt; CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
&lt;ul&gt;
&lt;li&gt;I sent Atmire the dspace.log from today and told them to log into the server to debug the process&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;li&gt;In other news, I checked the statistics API on DSpace 6 and it&amp;rsquo;s working&lt;/li&gt;
&lt;li&gt;I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:&lt;/li&gt;
&lt;/ul&gt;</description>
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<item>
<title>May, 2020</title>
<link>https://alanorth.github.io/cgspace-notes/2020-05/</link>
@ -28,24 +46,6 @@
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<item>
<title>June, 2020</title>
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<description>&lt;h2 id=&#34;2020-06-01&#34;&gt;2020-06-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I tried to run the &lt;code&gt;AtomicStatisticsUpdateCLI&lt;/code&gt; CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
&lt;ul&gt;
&lt;li&gt;I sent Atmire the dspace.log from today and told them to log into the server to debug the process&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;li&gt;In other news, I checked the statistics API on DSpace 6 and it&amp;rsquo;s working&lt;/li&gt;
&lt;li&gt;I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>April, 2020</title>
<link>https://alanorth.github.io/cgspace-notes/2020-04/</link>

8
docs/page/2/index.html
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@ -461,9 +461,9 @@ sys 0m1.979s
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<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/page/3/index.html
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@ -9,7 +9,7 @@
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@ -383,9 +383,9 @@ sys 2m7.289s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/page/4/index.html
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@ -9,7 +9,7 @@
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@ -432,9 +432,9 @@ COPY 54701
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/page/5/index.html
View File

@ -9,7 +9,7 @@
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@ -28,7 +28,7 @@
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@ -411,9 +411,9 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/page/6/index.html
View File

@ -9,7 +9,7 @@
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@ -322,9 +322,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

62
docs/posts/index.html
View File

@ -9,7 +9,7 @@
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@ -95,6 +95,33 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-06/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-06-01T13:55:39+03:00">Mon Jun 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2020-06/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-05/">May, 2020</a></h2>
@ -121,33 +148,6 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-05/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-05-01T13:55:39+03:00">Fri May 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2020-05/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-04/">April, 2020</a></h2>
@ -408,9 +408,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

38
docs/posts/index.xml
View File

@ -6,11 +6,29 @@
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&lt;li&gt;I tried to run the &lt;code&gt;AtomicStatisticsUpdateCLI&lt;/code&gt; CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
&lt;ul&gt;
&lt;li&gt;I sent Atmire the dspace.log from today and told them to log into the server to debug the process&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;li&gt;In other news, I checked the statistics API on DSpace 6 and it&amp;rsquo;s working&lt;/li&gt;
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<title>May, 2020</title>
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@ -28,24 +46,6 @@
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<item>
<title>June, 2020</title>
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<pubDate>Fri, 01 May 2020 13:55:39 +0300</pubDate>
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<description>&lt;h2 id=&#34;2020-06-01&#34;&gt;2020-06-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I tried to run the &lt;code&gt;AtomicStatisticsUpdateCLI&lt;/code&gt; CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
&lt;ul&gt;
&lt;li&gt;I sent Atmire the dspace.log from today and told them to log into the server to debug the process&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;li&gt;In other news, I checked the statistics API on DSpace 6 and it&amp;rsquo;s working&lt;/li&gt;
&lt;li&gt;I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>April, 2020</title>
<link>https://alanorth.github.io/cgspace-notes/2020-04/</link>

8
docs/posts/page/2/index.html
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@ -461,9 +461,9 @@ sys 0m1.979s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
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View File

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@ -383,9 +383,9 @@ sys 2m7.289s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/posts/page/4/index.html
View File

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@ -432,9 +432,9 @@ COPY 54701
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/posts/page/5/index.html
View File

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@ -411,9 +411,9 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
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<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

8
docs/posts/page/6/index.html
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},
"dateModified": "2020-05-02T09:52:04+03:00",
"dateModified": "2020-06-01T13:55:39+03:00",
"keywords": "notes,""migration,""notes,",
"description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
}
@ -322,9 +322,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

2
docs/robots.txt
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@ -3,7 +3,7 @@ User-agent: *
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Disallow: /cgspace-notes/
Disallow: /cgspace-notes/2020-05/
Disallow: /cgspace-notes/2020-06/
Disallow: /cgspace-notes/categories/notes/
Disallow: /cgspace-notes/posts/
Disallow: /cgspace-notes/2020-05/

14
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@ -4,32 +4,32 @@
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<loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
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<lastmod>2020-06-01T17:08:25+03:00</lastmod>
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<url>
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58
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@ -95,6 +95,33 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-06/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-06-01T13:55:39+03:00">Mon Jun 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2020-06/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-05/">May, 2020</a></h2>
@ -121,33 +148,6 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-05/">June, 2020</a></h2>
<p class="blog-post-meta"><time datetime="2020-05-01T13:55:39+03:00">Fri May 01, 2020</time> by Alan Orth in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2020-06-01">2020-06-01</h2>
<ul>
<li>I tried to run the <code>AtomicStatisticsUpdateCLI</code> CUA migration script on DSpace Test (linode26) again and it is still going very slowly and has tons of errors like I noticed yesterday
<ul>
<li>I sent Atmire the dspace.log from today and told them to log into the server to debug the process</li>
</ul>
</li>
<li>In other news, I checked the statistics API on DSpace 6 and it&rsquo;s working</li>
<li>I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Test and I get an error:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2020-05/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-04/">April, 2020</a></h2>
@ -408,9 +408,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
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@ -134,9 +134,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
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@ -384,9 +384,9 @@ DELETE 1
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
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@ -370,9 +370,9 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
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@ -179,9 +179,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/tags/page/2/index.html
View File

@ -461,9 +461,9 @@ sys 0m1.979s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/tags/page/3/index.html
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@ -383,9 +383,9 @@ sys 2m7.289s
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
docs/tags/page/4/index.html
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@ -432,9 +432,9 @@ COPY 54701
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
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@ -411,9 +411,9 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

4
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@ -322,9 +322,9 @@
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">June, 2020</a></li>
<li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
<li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>

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