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Add notes for 2018-02-06
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parent
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GPG Key ID:
0FB860CC9C45B1B9
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@ -83,3 +83,49 @@ UPDATE 20
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dspace=# \copy (select distinct text_value, count(*) as count from metadatavalue where metadata_field_id = (select metadata_field_id from metadatafieldregistry where element = 'contributor' and qualifier = 'author') AND resource_type_id = 2 group by text_value order by count desc) to /tmp/authors-2018-02-05.csv with csv;
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COPY 55630
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```
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## 2018-02-06
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- UptimeRobot says CGSpace is down this morning around 9:15
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- I see 308 PostgreSQL connections in `pg_stat_activity`
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- The usage otherwise seemed low for REST/OAI as well as XMLUI in the last hour:
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```
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# date
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Tue Feb 6 09:30:32 UTC 2018
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# cat /var/log/nginx/rest.log /var/log/nginx/rest.log.1 /var/log/nginx/oai.log /var/log/nginx/oai.log.1 | grep -E "6/Feb/2018:(08|09)" | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
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2 223.185.41.40
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2 66.249.64.14
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2 77.246.52.40
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4 157.55.39.82
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4 193.205.105.8
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5 207.46.13.63
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5 207.46.13.64
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6 154.68.16.34
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7 207.46.13.66
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1548 50.116.102.77
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# cat /var/log/nginx/access.log /var/log/nginx/access.log.1 /var/log/nginx/library-access.log /var/log/nginx/library-access.log.1 /var/log/nginx/error.log /var/log/nginx/error.log.1 | grep -E "6/Feb/2018:(08|09)" | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
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77 213.55.99.121
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86 66.249.64.14
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101 104.196.152.243
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103 207.46.13.64
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118 157.55.39.82
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133 207.46.13.66
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136 207.46.13.63
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156 68.180.228.157
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295 197.210.168.174
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752 144.76.64.79
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```
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- I did notice in `/var/log/tomcat7/catalina.out` that Atmire's update thing was running though
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- So I restarted Tomcat and now everything is fine
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- Next time I see that many database connections I need to save the output so I can analyze it later
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- I'm going to re-schedule the taskUpdateSolrStatsMetadata task as [Bram detailed in ticket 566](https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=566) to see if it makes CGSpace stop crashing every morning
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- If I move the task from 3AM to 3PM, deally CGSpace will stop crashing in the morning, or start crashing ~12 hours later
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- Eventually Atmire has said that there will be a fix for this high load caused by their script, but it will come with the 5.8 compatability they are already working on
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- I re-deployed CGSpace with the new task time of 3PM, ran all system updates, and restarted the server
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- Also, I changed the name of the DSpace fallback pool on DSpace Test and CGSpace to be called 'dspaceCli' so that I can distinguish it in `pg_stat_activity`
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- I implemented some changes to the pooling in the [Ansible infrastructure scripts](https://github.com/ilri/rmg-ansible-public) so that each DSpace web application can use its own pool (web, api, and solr)
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- Each pool uses its own name and hopefully this should help me figure out which one is using too many connections next time CGSpace goes down
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- Also, this will mean that when a search bot comes along and hammers the XMLUI, the REST and OAI applications will be fine
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- I'm not actually sure if the Solr web application uses the database though, so I'll have to check later and remove it if necessary
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@ -23,7 +23,7 @@ I copied the logic in the jmx_tomcat_dbpools provided by Ubuntu’s munin-pl
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<meta property="article:published_time" content="2018-02-01T16:28:54+02:00"/>
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<meta property="article:modified_time" content="2018-02-04T11:26:07+02:00"/>
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<meta property="article:modified_time" content="2018-02-05T19:08:05+02:00"/>
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@ -57,9 +57,9 @@ I copied the logic in the jmx_tomcat_dbpools provided by Ubuntu’s munin-pl
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"@type": "BlogPosting",
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"headline": "February, 2018",
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"url": "https://alanorth.github.io/cgspace-notes/2018-02/",
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"wordCount": "459",
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"wordCount": "856",
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"datePublished": "2018-02-01T16:28:54+02:00",
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"dateModified": "2018-02-04T11:26:07+02:00",
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"dateModified": "2018-02-05T19:08:05+02:00",
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"author": {
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"@type": "Person",
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"name": "Alan Orth"
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@ -215,6 +215,55 @@ UPDATE 20
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COPY 55630
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</code></pre>
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<h2 id="2018-02-06">2018-02-06</h2>
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<ul>
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<li>UptimeRobot says CGSpace is down this morning around 9:15</li>
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<li>I see 308 PostgreSQL connections in <code>pg_stat_activity</code></li>
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<li>The usage otherwise seemed low for REST/OAI as well as XMLUI in the last hour:</li>
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</ul>
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<pre><code># date
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Tue Feb 6 09:30:32 UTC 2018
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# cat /var/log/nginx/rest.log /var/log/nginx/rest.log.1 /var/log/nginx/oai.log /var/log/nginx/oai.log.1 | grep -E "6/Feb/2018:(08|09)" | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
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2 223.185.41.40
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2 66.249.64.14
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2 77.246.52.40
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4 157.55.39.82
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4 193.205.105.8
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5 207.46.13.63
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5 207.46.13.64
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6 154.68.16.34
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7 207.46.13.66
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1548 50.116.102.77
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# cat /var/log/nginx/access.log /var/log/nginx/access.log.1 /var/log/nginx/library-access.log /var/log/nginx/library-access.log.1 /var/log/nginx/error.log /var/log/nginx/error.log.1 | grep -E "6/Feb/2018:(08|09)" | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
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77 213.55.99.121
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86 66.249.64.14
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101 104.196.152.243
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103 207.46.13.64
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118 157.55.39.82
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133 207.46.13.66
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136 207.46.13.63
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156 68.180.228.157
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295 197.210.168.174
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752 144.76.64.79
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</code></pre>
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<ul>
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<li>I did notice in <code>/var/log/tomcat7/catalina.out</code> that Atmire’s update thing was running though</li>
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<li>So I restarted Tomcat and now everything is fine</li>
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<li>Next time I see that many database connections I need to save the output so I can analyze it later</li>
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<li>I’m going to re-schedule the taskUpdateSolrStatsMetadata task as <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=566">Bram detailed in ticket 566</a> to see if it makes CGSpace stop crashing every morning</li>
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<li>If I move the task from 3AM to 3PM, deally CGSpace will stop crashing in the morning, or start crashing ~12 hours later</li>
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<li>Eventually Atmire has said that there will be a fix for this high load caused by their script, but it will come with the 5.8 compatability they are already working on</li>
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<li>I re-deployed CGSpace with the new task time of 3PM, ran all system updates, and restarted the server</li>
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<li>Also, I changed the name of the DSpace fallback pool on DSpace Test and CGSpace to be called ‘dspaceCli’ so that I can distinguish it in <code>pg_stat_activity</code></li>
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<li>I implemented some changes to the pooling in the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> so that each DSpace web application can use its own pool (web, api, and solr)</li>
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<li>Each pool uses its own name and hopefully this should help me figure out which one is using too many connections next time CGSpace goes down</li>
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<li>Also, this will mean that when a search bot comes along and hammers the XMLUI, the REST and OAI applications will be fine</li>
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<li>I’m not actually sure if the Solr web application uses the database though, so I’ll have to check later and remove it if necessary</li>
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</ul>
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@ -32,7 +32,7 @@ Disallow: /cgspace-notes/2015-12/
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Disallow: /cgspace-notes/2015-11/
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Disallow: /cgspace-notes/
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Disallow: /cgspace-notes/categories/
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Disallow: /cgspace-notes/tags/notes/
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Disallow: /cgspace-notes/categories/notes/
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Disallow: /cgspace-notes/tags/notes/
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Disallow: /cgspace-notes/post/
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Disallow: /cgspace-notes/tags/
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@ -4,7 +4,7 @@
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/2018-02/</loc>
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<lastmod>2018-02-04T11:26:07+02:00</lastmod>
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<lastmod>2018-02-05T19:08:05+02:00</lastmod>
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</url>
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<url>
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@ -149,7 +149,7 @@
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/</loc>
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<lastmod>2018-02-04T11:26:07+02:00</lastmod>
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<lastmod>2018-02-05T19:08:05+02:00</lastmod>
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<priority>0</priority>
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</url>
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@ -158,27 +158,27 @@
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<priority>0</priority>
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</url>
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
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<lastmod>2018-02-04T11:26:07+02:00</lastmod>
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<priority>0</priority>
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</url>
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
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<lastmod>2017-09-28T12:00:49+03:00</lastmod>
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<priority>0</priority>
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</url>
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
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<lastmod>2018-02-05T19:08:05+02:00</lastmod>
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<priority>0</priority>
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</url>
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/post/</loc>
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<lastmod>2018-02-04T11:26:07+02:00</lastmod>
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<lastmod>2018-02-05T19:08:05+02:00</lastmod>
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<priority>0</priority>
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</url>
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
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<lastmod>2018-02-04T11:26:07+02:00</lastmod>
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<lastmod>2018-02-05T19:08:05+02:00</lastmod>
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<priority>0</priority>
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</url>
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