2019-12-01 10:29:49 +01:00
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Upgrade CGSpace (linode18) to Ubuntu 18.04:
Check any packages that have residual configs and purge them:
# dpkg -l | grep -E ‘ ^rc’ | awk ‘ {print $2}’ | xargs dpkg -P
Make sure all packages are up to date and the package manager is up to date, then reboot:
# apt update & & apt full-upgrade
# apt-get autoremove & & apt-get autoclean
# dpkg -C
# reboot
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< meta name = "twitter:description" content = "2019-12-01
Upgrade CGSpace (linode18) to Ubuntu 18.04:
Check any packages that have residual configs and purge them:
# dpkg -l | grep -E ‘ ^rc’ | awk ‘ {print $2}’ | xargs dpkg -P
Make sure all packages are up to date and the package manager is up to date, then reboot:
# apt update & & apt full-upgrade
# apt-get autoremove & & apt-get autoclean
# dpkg -C
# reboot
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2019-12-01 10:29:49 +01:00
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< h1 class = "blog-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/" rel = "home" > CGSpace Notes< / a > < / h1 >
< p class = "lead blog-description" dir = "auto" > Documenting day-to-day work on the < a href = "https://cgspace.cgiar.org" > CGSpace< / a > repository.< / p >
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< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2019-12/" > December, 2019< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2019-12-01T11:22:30+02:00" > Sun Dec 01, 2019< / time > by Alan Orth in
< i class = "fa fa-folder" aria-hidden = "true" > < / i > < a href = "/cgspace-notes/categories/notes" rel = "category tag" > Notes< / a >
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< h2 id = "20191201" > 2019-12-01< / h2 >
< ul >
< li > Upgrade CGSpace (linode18) to Ubuntu 18.04:
< ul >
< li > Check any packages that have residual configs and purge them:< / li >
< li > <!-- raw HTML omitted --> # dpkg -l | grep -E ‘ ^rc’ | awk ‘ {print $2}’ | xargs dpkg -P<!-- raw HTML omitted --> < / li >
< li > Make sure all packages are up to date and the package manager is up to date, then reboot:< / li >
< / ul >
< / li >
< / ul >
< pre > < code > # apt update & & apt full-upgrade
# apt-get autoremove & & apt-get autoclean
# dpkg -C
# reboot
< / code > < / pre > < ul >
< li > Take some backups:< / li >
< / ul >
< pre > < code > # dpkg -l > 2019-12-01-linode18-dpkg.txt
# tar czf 2019-12-01-linode18-etc.tar.gz /etc
< / code > < / pre > < ul >
< li > Then check all third-party repositories in /etc/apt to see if everything using “ xenial” has packages available for “ bionic” and then update the sources:< / li >
< li > <!-- raw HTML omitted --> # sed -i ‘ s/xenial/bionic/’ /etc/apt/sources.list.d/*.list<!-- raw HTML omitted --> < / li >
< li > Pause the Uptime Robot monitoring for CGSpace< / li >
< li > Make sure the update manager is installed and do the upgrade:< / li >
< / ul >
< pre > < code > # apt install update-manager-core
# do-release-upgrade
< / code > < / pre > < ul >
< li > After the upgrade finishes, remove Java 11, force the installation of bionic nginx, and reboot the server:< / li >
< / ul >
< pre > < code > # apt purge openjdk-11-jre-headless
# apt install 'nginx=1.16.1-1~bionic'
# reboot
< / code > < / pre > < ul >
< li > After the server comes back up, remove Python virtualenvs that were created with Python 3.5 and re-run certbot to make sure it's working:< / li >
< / ul >
< pre > < code > # rm -rf /opt/eff.org/certbot/venv/bin/letsencrypt
# rm -rf /opt/ilri/dspace-statistics-api/venv
# /opt/certbot-auto
< / code > < / pre > < ul >
< li > Clear Ansible's fact cache and re-run the playbooks to update the system's firewalls, SSH config, etc< / li >
2019-12-01 15:58:13 +01:00
< li > Altmetric finally responded to my question about Dublin Core fields
< ul >
< li > They shared a < a href = "https://help.altmetric.com/support/solutions/articles/6000141419-what-metadata-is-required-to-track-our-content-" > list of fields they use for tracking< / a > , but it only mentions HTML meta tags, and not fields considered when harvesting via OAI< / li >
< li > Anyways, there might be some areas we can improve on the HTML meta tags, if I look at one < a href = "https://hdl.handle.net/10568/101623" > item with a DOI, ISSN, etc< / a > I see that we could at least add status (Open Access) and journal title< / li >
< li > I merged a < a href = "https://github.com/ilri/DSpace/pull/438" > pull request< / a > into the < code > 5_x-prod< / code > branch to add status and journal title to the XHTML meta tags< / li >
< / ul >
< / li >
2019-12-01 10:29:49 +01:00
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< h4 > Recent Posts< / h4 >
< ol class = "list-unstyled" >
< li > < a href = "/cgspace-notes/2019-12/" > December, 2019< / a > < / li >
< li > < a href = "/cgspace-notes/2019-11/" > November, 2019< / a > < / li >
< li > < a href = "/cgspace-notes/cgspace-cgcorev2-migration/" > CGSpace CG Core v2 Migration< / a > < / li >
< li > < a href = "/cgspace-notes/2019-10/" > October, 2019< / a > < / li >
< li > < a href = "/cgspace-notes/2019-09/" > September, 2019< / a > < / li >
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< h4 > Links< / h4 >
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< li > < a href = "https://cgspace.cgiar.org" > CGSpace< / a > < / li >
< li > < a href = "https://dspacetest.cgiar.org" > DSpace Test< / a > < / li >
< li > < a href = "https://github.com/ilri/DSpace" > CGSpace @ GitHub< / a > < / li >
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