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Spend some time testing my post_bitstreams.py script to update thumbnails for items on CGSpace
Interestingly I found an item with a JFIF thumbnail and another with a WebP thumbnail&hellip;
Meeting with Valentina, Stefano, and Sara about MODS metadata in CGSpace
They have experience with improving the MODS interface in MELSpace&rsquo;s OAI-PMH for use with AGRIS and were curious if we could do the same in CGSpace
From what I can see we need to upgrade the MODS schema from 3.1 to 3.7 and then just add a bunch of our fields to the crosswalk
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Spend some time testing my post_bitstreams.py script to update thumbnails for items on CGSpace
Interestingly I found an item with a JFIF thumbnail and another with a WebP thumbnail&hellip;
Meeting with Valentina, Stefano, and Sara about MODS metadata in CGSpace
They have experience with improving the MODS interface in MELSpace&rsquo;s OAI-PMH for use with AGRIS and were curious if we could do the same in CGSpace
From what I can see we need to upgrade the MODS schema from 3.1 to 3.7 and then just add a bunch of our fields to the crosswalk
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<h1 class="blog-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
<p class="lead blog-description" dir="auto">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2023-06/">June, 2023</a></h2>
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<time datetime="2023-06-02T10:29:36+03:00">Fri Jun 02, 2023</time>
in
<span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/categories/notes/" rel="category tag">Notes</a>
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</header>
<h2 id="2023-06-02">2023-06-02</h2>
<ul>
<li>Spend some time testing my <code>post_bitstreams.py</code> script to update thumbnails for items on CGSpace
<ul>
<li>Interestingly I found an item with a JFIF thumbnail and another with a WebP thumbnail&hellip;</li>
</ul>
</li>
<li>Meeting with Valentina, Stefano, and Sara about MODS metadata in CGSpace
<ul>
<li>They have experience with improving the MODS interface in MELSpace&rsquo;s OAI-PMH for use with AGRIS and were curious if we could do the same in CGSpace</li>
<li>From what I can see we need to upgrade the MODS schema from 3.1 to 3.7 and then just add a bunch of our fields to the crosswalk</li>
</ul>
</li>
</ul>
Add notes for 2023-06-04
2023-06-04 10:00:30 +02:00
<h2 id="2023-06-04">2023-06-04</h2>
<ul>
<li>Upgrade CGSpace to Ubuntu 22.04
<ul>
<li>The upgrade was mostly normal, but I had to unhold the openjdk package in order for <code>do-release-upgrade</code> to run:</li>
</ul>
</li>
</ul>
<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span># apt-mark hold openjdk-8-jdk-headless:amd64 openjdk-8-jre-headless:amd64
</span></span></code></pre></div><ul>
<li>In <a href="/cgspace-notes/2022-11/">2022-11</a> an upstream Java update broke the DSpace 6 Handle server so we will have to pin this again after the upgrade to Ubuntu 22.04</li>
Add notes for 2023-06-06
2023-06-06 15:54:25 +02:00
<li>After the upgrade I made sure CGSpace was working, then proceeded to upgrade PostgreSQL from 12 to 14, like I did on <a href="/cgspace-notes/2023-03/">DSpace Test in 2023-03</a></li>
Add notes for 2023-06-04
2023-06-04 10:00:30 +02:00
<li>Then I had to downgrade OpenJDK to fix the Handle server using the ones I had previously downloaded for Ubuntu 20.04 because they no longer exist on Launchpad:</li>
</ul>
<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span># dpkg -i openjdk-8-j*8u342-b07*.deb
Add notes for 2023-06-06
2023-06-06 15:54:25 +02:00
</span></span></code></pre></div><ul>
<li>Export CGSpace to fix missing Initiative collection mappings</li>
<li>Start a harvest on AReS</li>
<li>Work on the DSpace 7 migration a bit more
<ul>
<li>I decided to rebase and drop all the submission form edits because they conflict every time upstream changes!</li>
</ul>
</li>
</ul>
<h2 id="2023-06-06">2023-06-06</h2>
<ul>
<li>Fix some incorrect ORCID identifiers for an Alliance author on CGSpace</li>
<li>Export our list of ORCID identifiers, resolve them, and update the records in CGSpace:</li>
</ul>
<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span>$ cat dspace/config/controlled-vocabularies/cg-creator-identifier.xml 2022-09-22-add-orcids.csv| grep -oE <span style="color:#e6db74">&#39;[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}&#39;</span> | sort -u &gt; /tmp/2023-06-06-orcids.txt
</span></span><span style="display:flex;"><span>$ ./ilri/resolve_orcids.py -i /tmp/2023-06-06-orcids.txt -o /tmp/2023-06-06-orcids-names.txt -d
</span></span><span style="display:flex;"><span>$ ./ilri/update_orcids.py -i /tmp/2023-06-06-orcids-names.txt -db dspacetest -u dspace -p <span style="color:#e6db74">&#39;ffff&#39;</span> -m <span style="color:#ae81ff">247</span>
</span></span></code></pre></div><ul>
<li>Start working on updating the MODS schema in CGSpace from 3.1 to 3.8 based on Stefano and Salem&rsquo;s work last year</li>
</ul>
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<h4>Recent Posts</h4>
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2023-06/">June, 2023</a></li>
<li><a href="/cgspace-notes/2023-05/">May, 2023</a></li>
<li><a href="/cgspace-notes/2023-04/">April, 2023</a></li>
<li><a href="/cgspace-notes/2023-03/">March, 2023</a></li>
<li><a href="/cgspace-notes/2023-02/">February, 2023</a></li>
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<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
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