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< h1 class = "blog-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/" rel = "home" > CGSpace Notes< / a > < / h1 >
< p class = "lead blog-description" dir = "auto" > Documenting day-to-day work on the < a href = "https://cgspace.cgiar.org" > CGSpace< / a > repository.< / p >
2018-02-11 17:28:23 +01:00
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2021-04-05 18:36:44 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2021-04/" > April, 2021< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-04-01T09:50:54+03:00" > Thu Apr 01, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/categories/notes/" rel = "category tag" > Notes< / a >
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< h2 id = "2021-04-01" > 2021-04-01< / h2 >
< ul >
< li > I wrote a script to query Sherpa’ s API for our ISSNs: < code > sherpa-issn-lookup.py< / code >
< ul >
< li > I’ m curious to see how the results compare with the results from Crossref yesterday< / li >
< / ul >
< / li >
< li > AReS Explorer was down since this morning, I didn’ t see anything in the systemd journal
< ul >
< li > I simply took everything down with docker-compose and then back up, and then it was OK< / li >
< li > Perhaps one of the containers crashed, I should have looked closer but I was in a hurry< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2021-04/' > Read more →< / a >
< / article >
2021-03-04 21:46:05 +01:00
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< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2021-03/" > March, 2021< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-03-01T10:13:54+02:00" > Mon Mar 01, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/categories/notes/" rel = "category tag" > Notes< / a >
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< h2 id = "2021-03-01" > 2021-03-01< / h2 >
< ul >
< li > Discuss some OpenRXV issues with Abdullah from CodeObia
< ul >
< li > He’ s trying to work on the DSpace 6+ metadata schema autoimport using the DSpace 6+ REST API< / li >
< li > Also, we found some issues building and running OpenRXV currently due to ecosystem shift in the Node.js dependencies< / li >
< / ul >
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< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2021-03/' > Read more →< / a >
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2021-04-01 08:49:08 +02:00
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< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/" > CGSpace CG Core v2 Migration< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-02-21T13:27:35+02:00" > Sun Feb 21, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/categories/notes/" rel = "category tag" > Notes< / a >
< span class = "fas fa-tag" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/tags/migration/" rel = "tag" > Migration< / a >
< / p >
< / header >
< p > Changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2. Implemented on 2021-02-21.< / p >
< p > With reference to < a href = "https://agriculturalsemantics.github.io/cg-core/cgcore.html" > CG Core v2 draft standard< / a > by Marie-Angélique as well as < a href = "http://www.dublincore.org/specifications/dublin-core/dcmi-terms/" > DCMI DCTERMS< / a > .< / p >
< a href = 'https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/' > Read more →< / a >
< / article >
2021-02-01 11:28:54 +01:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2021-02/" > February, 2021< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-02-01T10:13:54+02:00" > Mon Feb 01, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/categories/notes/" rel = "category tag" > Notes< / a >
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< / header >
< h2 id = "2021-02-01" > 2021-02-01< / h2 >
< ul >
2021-02-04 16:28:20 +01:00
< li > Abenet said that CIP found more duplicate records in their export from AReS
< ul >
< li > I re-opened < a href = "https://github.com/ilri/OpenRXV/issues/67" > the issue< / a > on OpenRXV where we had previously noticed this< / li >
< li > The shared link where the duplicates are is here: < a href = "https://cgspace.cgiar.org/explorer/shared/heEOz3YBnXdK69bR2ra6" > https://cgspace.cgiar.org/explorer/shared/heEOz3YBnXdK69bR2ra6< / a > < / li >
< / ul >
< / li >
< li > I had a call with CodeObia to discuss the work on OpenRXV< / li >
2021-02-01 11:28:54 +01:00
< li > Check the results of the AReS harvesting from last night:< / li >
< / ul >
< pre > < code class = "language-console" data-lang = "console" > $ curl -s 'http://localhost:9200/openrxv-items-temp/_count?q=*& pretty'
{
" count" : 100875,
" _shards" : {
" total" : 1,
" successful" : 1,
" skipped" : 0,
" failed" : 0
}
}
< / code > < / pre >
< a href = 'https://alanorth.github.io/cgspace-notes/2021-02/' > Read more →< / a >
< / article >
2021-01-03 09:15:24 +01:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2021-01/" > January, 2021< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-01-03T10:13:54+02:00" > Sun Jan 03, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/categories/notes/" rel = "category tag" > Notes< / a >
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< h2 id = "2021-01-03" > 2021-01-03< / h2 >
< ul >
< li > Peter notified me that some filters on AReS were broken again
< ul >
< li > It’ s the same issue with the field names getting < code > .keyword< / code > appended to the end that I already < a href = "https://github.com/ilri/OpenRXV/issues/66" > filed an issue on OpenRXV about last month< / a > < / li >
< li > I fixed the broken filters (careful to not edit any others, lest they break too!)< / li >
< / ul >
< / li >
2021-01-04 19:09:02 +01:00
< li > Fix an issue with start page number for the DSpace REST API and statistics API in OpenRXV
< ul >
< li > The start page had been “ 1” in the UI, but in the backend they were doing some gymnastics to adjust to the zero-based offset/limit/page of the DSpace REST API and the statistics API< / li >
< li > I adjusted it to default to 0 and added a note to the admin screen< / li >
< li > I realized that this issue was actually causing the first page of 100 statistics to be missing… < / li >
< li > For example, < a href = "https://cgspace.cgiar.org/handle/10568/66839" > this item< / a > has 51 views on CGSpace, but 0 on AReS< / li >
< / ul >
< / li >
2021-01-03 09:15:24 +01:00
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< a href = 'https://alanorth.github.io/cgspace-notes/2021-01/' > Read more →< / a >
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2020-12-01 18:15:48 +01:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2020-12/" > December, 2020< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2020-12-01T11:32:54+02:00" > Tue Dec 01, 2020< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/categories/notes/" rel = "category tag" > Notes< / a >
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< / header >
< h2 id = "2020-12-01" > 2020-12-01< / h2 >
< ul >
< li > Atmire responded about the issue with duplicate data in our Solr statistics
< ul >
< li > They noticed that some records in the statistics-2015 core haven’ t been migrated with the AtomicStatisticsUpdateCLI tool yet and assumed that I haven’ t migrated any of the records yet< / li >
< li > That’ s strange, as I checked all ten cores and 2015 is the only one with some unmigrated documents, as according to the < code > cua_version< / code > field< / li >
< li > I started processing those (about 411,000 records):< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2020-12/' > Read more →< / a >
< / article >
2020-11-17 21:14:56 +01:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/cgspace-dspace6-upgrade/" > CGSpace DSpace 6 Upgrade< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2020-11-15T13:27:35+02:00" > Sun Nov 15, 2020< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/categories/notes/" rel = "category tag" > Notes< / a >
< span class = "fas fa-tag" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/tags/migration/" rel = "tag" > Migration< / a >
< / p >
< / header >
< p > Notes about the DSpace 6 upgrade on CGSpace in 2020-11.< / p >
< a href = 'https://alanorth.github.io/cgspace-notes/cgspace-dspace6-upgrade/' > Read more →< / a >
< / article >
2020-11-02 18:34:10 +01:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2020-11/" > November, 2020< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2020-11-01T13:11:54+02:00" > Sun Nov 01, 2020< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/categories/notes/" rel = "category tag" > Notes< / a >
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< h2 id = "2020-11-01" > 2020-11-01< / h2 >
< ul >
< li > Continue with processing the statistics-2019 Solr core with the AtomicStatisticsUpdateCLI tool on DSpace Test
< ul >
< li > So far we’ ve spent at least fifty hours to process the statistics and statistics-2019 core… wow.< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2020-11/' > Read more →< / a >
< / article >
2020-10-06 15:59:31 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2020-10/" > October, 2020< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2020-10-06T16:55:54+03:00" > Tue Oct 06, 2020< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/categories/notes/" rel = "category tag" > Notes< / a >
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< / header >
< h2 id = "2020-10-06" > 2020-10-06< / h2 >
< ul >
< li > Add tests for the new < code > /items< / code > POST handlers to the DSpace 6.x branch of my < a href = "https://github.com/ilri/dspace-statistics-api/tree/v6_x" > dspace-statistics-api< / a >
< ul >
< li > It took a bit of extra work because I had to learn how to mock the responses for when Solr is not available< / li >
2020-10-06 22:38:45 +02:00
< li > Tag and release version 1.3.0 on GitHub: < a href = "https://github.com/ilri/dspace-statistics-api/releases/tag/v1.3.0" > https://github.com/ilri/dspace-statistics-api/releases/tag/v1.3.0< / a > < / li >
< / ul >
< / li >
< li > Trying to test the changes Atmire sent last week but I had to re-create my local database from a recent CGSpace dump
< ul >
< li > During the FlywayDB migration I got an error:< / li >
2020-10-06 15:59:31 +02:00
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< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2020-10/' > Read more →< / a >
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2020-09-03 12:50:56 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2020-09/" > September, 2020< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2020-09-02T15:35:54+03:00" > Wed Sep 02, 2020< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/cgspace-notes/categories/notes/" rel = "category tag" > Notes< / a >
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< / header >
< h2 id = "2020-09-02" > 2020-09-02< / h2 >
< ul >
< li > Replace Marissa van Epp for Rhys Bucknall in the CCAFS groups on CGSpace because Marissa no longer works at CCAFS< / li >
< li > The AReS Explorer hasn’ t updated its index since 2020-08-22 when I last forced it
< ul >
< li > I restarted it again now and told Moayad that the automatic indexing isn’ t working< / li >
< / ul >
< / li >
< li > Add < code > Alliance of Bioversity International and CIAT< / code > to affiliations on CGSpace< / li >
< li > Abenet told me that the general search text on AReS doesn’ t get reset when you use the “ Reset Filters” button
< ul >
< li > I filed a bug on OpenRXV: < a href = "https://github.com/ilri/OpenRXV/issues/39" > https://github.com/ilri/OpenRXV/issues/39< / a > < / li >
< / ul >
< / li >
< li > I filed an issue on OpenRXV to make some minor edits to the admin UI: < a href = "https://github.com/ilri/OpenRXV/issues/40" > https://github.com/ilri/OpenRXV/issues/40< / a > < / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2020-09/' > Read more →< / a >
< / article >
2018-02-11 17:28:23 +01:00
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< h4 > Recent Posts< / h4 >
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2021-04-05 18:36:44 +02:00
< li > < a href = "/cgspace-notes/2021-04/" > April, 2021< / a > < / li >
2021-03-04 21:46:05 +01:00
< li > < a href = "/cgspace-notes/2021-03/" > March, 2021< / a > < / li >
2021-04-01 08:49:08 +02:00
< li > < a href = "/cgspace-notes/cgspace-cgcorev2-migration/" > CGSpace CG Core v2 Migration< / a > < / li >
2021-02-01 11:28:54 +01:00
< li > < a href = "/cgspace-notes/2021-02/" > February, 2021< / a > < / li >
2021-01-03 09:15:24 +01:00
< li > < a href = "/cgspace-notes/2021-01/" > January, 2021< / a > < / li >
2018-02-11 17:28:23 +01:00
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< / section >
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< h4 > Links< / h4 >
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< li > < a href = "https://cgspace.cgiar.org" > CGSpace< / a > < / li >
< li > < a href = "https://dspacetest.cgiar.org" > DSpace Test< / a > < / li >
< li > < a href = "https://github.com/ilri/DSpace" > CGSpace @ GitHub< / a > < / li >
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