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2019-10-11 10:19:42 +02:00
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< h1 class = "blog-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/" rel = "home" > CGSpace Notes< / a > < / h1 >
< p class = "lead blog-description" dir = "auto" > Documenting day-to-day work on the < a href = "https://cgspace.cgiar.org" > CGSpace< / a > repository.< / p >
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2022-11-01 20:12:24 +01:00
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< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2022-11/" > November, 2022< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2022-11-01T09:11:36+03:00" > Tue Nov 01, 2022< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
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< h2 id = "2022-11-01" > 2022-11-01< / h2 >
< ul >
< li > Last night I re-synced DSpace 7 Test from CGSpace
< ul >
< li > I also updated all my local < code > 7_x-dev< / code > branches on the latest upstreams< / li >
< / ul >
< / li >
< li > I spent some time updating the authorizations in Alliance collections
< ul >
< li > I want to make sure they use groups instead of individuals where possible!< / li >
< / ul >
< / li >
< li > I reverted the Cocoon autosave change because it was more of a nuissance that Peter can’ t upload CSVs from the web interface and is a very low severity security issue< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2022-11/' > Read more →< / a >
< / article >
2022-10-01 18:47:37 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2022-10/" > October, 2022< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2022-10-01T19:45:36+03:00" > Sat Oct 01, 2022< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
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< h2 id = "2022-10-01" > 2022-10-01< / h2 >
< ul >
< li > Start a harvest on AReS last night< / li >
< li > Yesterday I realized how to use < a href = "https://im4java.sourceforge.net/docs/dev-guide.html" > GraphicsMagick with im4java< / a > and I want to re-visit some of my thumbnail tests
< ul >
< li > I’ m also interested in libvips support via jVips, though last time I checked it was only for Java 8< / li >
< li > I filed < a href = "https://github.com/criteo/JVips/issues/141" > an issue to ask about Java 11+ support< / a > < / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2022-10/' > Read more →< / a >
< / article >
2022-09-15 07:37:57 +02:00
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< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2022-09/" > September, 2022< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2022-09-01T09:41:36+03:00" > Thu Sep 01, 2022< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
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< h2 id = "2022-09-01" > 2022-09-01< / h2 >
< ul >
< li > A bit of work on the “ Mapping CG Core– – – ” spreadsheet< / li >
< li > I tested an item submission on DSpace Test with the Cocoon < code > org.apache.cocoon.uploads.autosave=false< / code > change
< ul >
< li > The submission works as expected< / li >
< / ul >
< / li >
< li > Start debugging some region-related issues with csv-metadata-quality
< ul >
< li > I created a new test file < code > test-geography.csv< / code > with some different scenarios< / li >
< li > I also fixed a few bugs and improved the region-matching logic< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2022-09/' > Read more →< / a >
< / article >
2022-08-01 15:36:13 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2022-08/" > August, 2022< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2022-08-01T10:22:36+03:00" > Mon Aug 01, 2022< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
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< h2 id = "2022-08-01" > 2022-08-01< / h2 >
< ul >
< li > Our request to add < a href = "https://github.com/spdx/license-list-XML/issues/1525" > CC-BY-3.0-IGO to SPDX< / a > was approved a few weeks ago< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2022-08/' > Read more →< / a >
< / article >
2022-07-04 08:25:14 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2022-07/" > July, 2022< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2022-07-02T14:07:36+03:00" > Sat Jul 02, 2022< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
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< h2 id = "2022-07-02" > 2022-07-02< / h2 >
< ul >
< li > I learned how to use the Levenshtein functions in PostgreSQL
< ul >
< li > The thing is that there is a limit of 255 characters for these functions in PostgreSQL so you need to truncate the strings before comparing< / li >
< li > Also, the trgm functions I’ ve used before are case insensitive, but Levenshtein is not, so you need to make sure to lower case both strings first< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2022-07/' > Read more →< / a >
< / article >
2022-06-06 08:45:43 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2022-06/" > June, 2022< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2022-06-06T09:01:36+03:00" > Mon Jun 06, 2022< / time > by Alan Orth in
2022-06-23 07:40:53 +02:00
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
2022-06-06 08:45:43 +02:00
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< h2 id = "2022-06-06" > 2022-06-06< / h2 >
< ul >
< li > Look at the Solr statistics on CGSpace
< ul >
< li > I see 167,000 hits from a bunch of Microsoft IPs with reverse DNS “ msnbot-” using the Solr query < code > dns:*msnbot* AND dns:*.msn.com< / code > < / li >
< li > I purged these first so I could see the other “ real” IPs in the Solr facets< / li >
< / ul >
< / li >
< li > I see 47,500 hits from 80.248.237.167 on a data center ISP in Sweden, using a normal user agent< / li >
< li > I see 13,000 hits from 163.237.216.11 on a data center ISP in Australia, using a normal user agent< / li >
< li > I see 7,300 hits from 208.185.238.57 from Britanica, using a normal user agent
< ul >
< li > There seem to be many more of these:< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2022-06/' > Read more →< / a >
< / article >
2022-05-04 10:09:45 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2022-05/" > May, 2022< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2022-05-04T09:13:39+03:00" > Wed May 04, 2022< / time > by Alan Orth in
2022-06-23 07:40:53 +02:00
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
2022-05-04 10:09:45 +02:00
< / p >
< / header >
< h2 id = "2022-05-04" > 2022-05-04< / h2 >
< ul >
< li > I found a few more IPs making requests using the shady Chrome 44 user agent in the last few days so I will add them to the block list too:
< ul >
< li > 18.207.136.176< / li >
< li > 185.189.36.248< / li >
< li > 50.118.223.78< / li >
< li > 52.70.76.123< / li >
< li > 3.236.10.11< / li >
< / ul >
< / li >
< li > Looking at the Solr statistics for 2022-04
< ul >
< li > 52.191.137.59 is Microsoft, but they are using a normal user agent and making tens of thousands of requests< / li >
< li > 64.39.98.62 is owned by Qualys, and all their requests are probing for /etc/passwd etc< / li >
< li > 185.192.69.15 is in the Netherlands and is using a normal user agent, but making excessive automated HTTP requests to paths forbidden in robots.txt< / li >
< li > 157.55.39.159 is owned by Microsoft and identifies as bingbot so I don’ t know why its requests were logged in Solr< / li >
< li > 52.233.67.176 is owned by Microsoft and uses a normal user agent, but making excessive automated HTTP requests< / li >
< li > 157.55.39.144 is owned by Microsoft and uses a normal user agent, but making excessive automated HTTP requests< / li >
< li > 207.46.13.177 is owned by Microsoft and identifies as bingbot so I don’ t know why its requests were logged in Solr< / li >
< li > If I query Solr for < code > time:2022-04* AND dns:*msnbot* AND dns:*.msn.com.< / code > I see a handful of IPs that made 41,000 requests< / li >
< / ul >
< / li >
< li > I purged 93,974 hits from these IPs using my < code > check-spider-ip-hits.sh< / code > script< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2022-05/' > Read more →< / a >
< / article >
2022-03-01 15:48:40 +01:00
< article class = "blog-post" >
< header >
2022-04-27 08:58:45 +02:00
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2022-04/" > April, 2022< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2022-04-01T10:53:39+03:00" > Fri Apr 01, 2022< / time > by Alan Orth in
2022-06-23 07:40:53 +02:00
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
2022-03-01 15:48:40 +01:00
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2022-06-14 07:45:07 +02:00
2022-04-01 I did G1GC tests on DSpace Test (linode26) to compliment the CMS tests I did yesterday The Discovery indexing took this long: real 334m33.625s user 227m51.331s sys 3m43.037s 2022-04-04 Start a full harvest on AReS Help Marianne with submit/approve access on a new collection on CGSpace Go back in Gaia’ s batch reports to find records that she indicated for replacing on CGSpace (ie, those with better new copies, new versions, etc) Looking at the Solr statistics for 2022-03 on CGSpace I see 54.
2022-04-27 08:58:45 +02:00
< a href = 'https://alanorth.github.io/cgspace-notes/2022-04/' > Read more →< / a >
2022-03-01 15:48:40 +01:00
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2022-04-04 18:15:58 +02:00
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< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2022-03/" > March, 2022< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2022-03-01T16:46:54+03:00" > Tue Mar 01, 2022< / time > by Alan Orth in
2022-06-23 07:40:53 +02:00
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
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2022-04-27 08:58:45 +02:00
< h2 id = "2022-03-01" > 2022-03-01< / h2 >
< ul >
< li > Send Gaia the last batch of potential duplicates for items 701 to 980:< / li >
< / ul >
< div class = "highlight" > < pre tabindex = "0" style = "color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;" > < code class = "language-console" data-lang = "console" > < span style = "display:flex;" > < span > $ csvcut -c id,dc.title,dcterms.issued,dcterms.type ~/Downloads/2022-03-01-CGSpace-TAC-ICW-batch4-701-980.csv > /tmp/tac4.csv
< / span > < / span > < span style = "display:flex;" > < span > $ ./ilri/check-duplicates.py -i /tmp/tac4.csv -db dspace -u dspace -p < span style = "color:#e6db74" > ' fuuu' < / span > -o /tmp/2022-03-01-tac-batch4-701-980.csv
< / span > < / span > < span style = "display:flex;" > < span > $ csvcut -c id,filename ~/Downloads/2022-03-01-CGSpace-TAC-ICW-batch4-701-980.csv > /tmp/tac4-filenames.csv
< / span > < / span > < span style = "display:flex;" > < span > $ csvjoin -c id /tmp/2022-03-01-tac-batch4-701-980.csv /tmp/tac4-filenames.csv > /tmp/2022-03-01-tac-batch4-701-980-filenames.csv
< / span > < / span > < / code > < / pre > < / div >
2022-04-04 18:15:58 +02:00
< a href = 'https://alanorth.github.io/cgspace-notes/2022-03/' > Read more →< / a >
< / article >
2022-02-10 18:35:40 +01:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2022-02/" > February, 2022< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2022-02-01T14:06:54+02:00" > Tue Feb 01, 2022< / time > by Alan Orth in
2022-06-23 07:40:53 +02:00
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
2022-02-10 18:35:40 +01:00
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< / header >
< h2 id = "2022-02-01" > 2022-02-01< / h2 >
< ul >
< li > Meeting with Peter and Abenet about CGSpace in the One CGIAR
< ul >
< li > We agreed to buy $5,000 worth of credits from Atmire for future upgrades< / li >
< li > We agreed to move CRPs and non-CGIAR communities off the home page, as well as some other things for the CGIAR System Organization< / li >
< li > We agreed to make a Discovery facet for CGIAR Action Areas above the existing CGIAR Impact Areas one< / li >
< li > We agreed to try to do more alignment of affiliations/funders with ROR< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2022-02/' > Read more →< / a >
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2018-02-11 17:28:23 +01:00
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< h4 > Recent Posts< / h4 >
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2022-11-01 20:12:24 +01:00
< li > < a href = "/cgspace-notes/2022-11/" > November, 2022< / a > < / li >
2022-10-01 18:47:37 +02:00
< li > < a href = "/cgspace-notes/2022-10/" > October, 2022< / a > < / li >
2022-09-15 07:37:57 +02:00
< li > < a href = "/cgspace-notes/2022-09/" > September, 2022< / a > < / li >
2022-08-01 15:36:13 +02:00
< li > < a href = "/cgspace-notes/2022-08/" > August, 2022< / a > < / li >
2022-07-04 08:25:14 +02:00
< li > < a href = "/cgspace-notes/2022-07/" > July, 2022< / a > < / li >
2018-02-11 17:28:23 +01:00
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< h4 > Links< / h4 >
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< li > < a href = "https://cgspace.cgiar.org" > CGSpace< / a > < / li >
< li > < a href = "https://dspacetest.cgiar.org" > DSpace Test< / a > < / li >
< li > < a href = "https://github.com/ilri/DSpace" > CGSpace @ GitHub< / a > < / li >
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Blog template created by < a href = "https://twitter.com/mdo" > @mdo< / a > , ported to Hugo by < a href = 'https://twitter.com/mralanorth' > @mralanorth< / a > .
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