.github: update Python actions

We don't need to use `python setup.py install` anymore. We can use
poetry directly in CI.

See: https://github.com/actions/setup-python/blob/main/docs/advanced-usage.md

.github/workflows/python-app.yml

@@ -16,36 +16,30 @@ jobs:
 
     steps:
     - uses: actions/checkout@v3
-    - name: Set up Python 3.11
+    - name: Install poetry
-      uses: actions/setup-python@v4
+      run: pipx install poetry
+    - uses: actions/setup-python@v4
       with:
         python-version: '3.11'
-        cache: 'pip'
+        cache: 'poetry'
-    - name: Install dependencies
+    - run: poetry install
-      run: |
-        python -m pip install --upgrade pip
-        pip install flake8 pytest
-        if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
-        if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi
     - name: Lint with flake8
       run: |
         # stop the build if there are Python syntax errors or undefined names
-        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+        poetry run flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
         # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
-        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+        poetry run flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
     - name: Test with pytest
-      run: |
+      run: poetry run pytest
-        pytest
     - name: Test CLI
       run: |
-        python setup.py install
         # Basic test
-        csv-metadata-quality -i data/test.csv -o /tmp/test.csv
+        poetry run csv-metadata-quality -i data/test.csv -o /tmp/test.csv
         # Test with unsafe fixes
-        csv-metadata-quality -i data/test.csv -o /tmp/test.csv -u
+        poetry run csv-metadata-quality -i data/test.csv -o /tmp/test.csv -u
         # Test with experimental checks
-        csv-metadata-quality -i data/test.csv -o /tmp/test.csv -e
+        poetry run csv-metadata-quality -i data/test.csv -o /tmp/test.csv -e
         # Test with AGROVOC validation
-        csv-metadata-quality -i data/test.csv -o /tmp/test.csv --agrovoc-fields dcterms.subject
+        poetry run csv-metadata-quality -i data/test.csv -o /tmp/test.csv --agrovoc-fields dcterms.subject
         # Test with AGROVOC validation (and dropping invalid)
-        csv-metadata-quality -i data/test.csv -o /tmp/test.csv --agrovoc-fields dcterms.subject -d
+        poetry run csv-metadata-quality -i data/test.csv -o /tmp/test.csv --agrovoc-fields dcterms.subject -d

poetry.lock

@@ -79,17 +79,6 @@ sqlalchemy = "<2"
 docs = ["Sphinx (>=1.2.2)", "sphinx-rtd-theme (>=0.1.6)"]
 test = ["crate", "geojson", "pytest", "pytest-cov"]
 
-[[package]]
-name = "appdirs"
-version = "1.4.4"
-description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
-optional = false
-python-versions = "*"
-files = [
-    {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"},
-    {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"},
-]
-
 [[package]]
 name = "appnope"
 version = "0.1.3"
@@ -1427,29 +1416,29 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"]
 
 [[package]]
 name = "requests-cache"
-version = "0.9.8"
+version = "1.0.1"
-description = "A transparent persistent cache for the requests library"
+description = "A persistent cache for python requests"
 optional = false
 python-versions = ">=3.7,<4.0"
 files = [
-    {file = "requests_cache-0.9.8-py3-none-any.whl", hash = "sha256:3a16021a4b5014b5b32af9c34f07cb911e99a69074d664dfd4fddb62a2997c21"},
+    {file = "requests_cache-1.0.1-py3-none-any.whl", hash = "sha256:55c5765c26fd98a38c633d6e3931a507b7708cdd07c0afb48773d0718ac15969"},
-    {file = "requests_cache-0.9.8.tar.gz", hash = "sha256:eaed4eb5fd5c392ba5e7cfa000d4ab96b1d32c1a1620f37aa558c43741ac362b"},
+    {file = "requests_cache-1.0.1.tar.gz", hash = "sha256:d42e6c2f11de54e6a134c9a00c5ca2a3c8edde3c3f2bdfd942586fafa8990e14"},
 ]
 
 [package.dependencies]
-appdirs = ">=1.4.4"
 attrs = ">=21.2"
 cattrs = ">=22.2"
+platformdirs = ">=2.5"
 requests = ">=2.22"
 url-normalize = ">=1.4"
 urllib3 = ">=1.25.5"
 
 [package.extras]
-all = ["boto3 (>=1.15)", "botocore (>=1.18)", "itsdangerous (>=2.0)", "pymongo (>=3)", "pyyaml (>=5.4)", "redis (>=3)", "ujson (>=4.0)"]
+all = ["boto3 (>=1.15)", "botocore (>=1.18)", "itsdangerous (>=2.0)", "pymongo (>=3)", "pyyaml (>=5.4)", "redis (>=3)", "ujson (>=5.4)"]
 bson = ["bson (>=0.5)"]
-docs = ["furo (>=2021.9.8)", "linkify-it-py (>=1.0.1,<2.0.0)", "myst-parser (>=0.15.1,<0.16.0)", "sphinx (==4.3.0)", "sphinx-autodoc-typehints (>=1.11,<2.0)", "sphinx-automodapi (>=0.13,<0.15)", "sphinx-copybutton (>=0.3,<0.5)", "sphinx-inline-tabs (>=2022.1.2b11)", "sphinx-notfound-page (>=0.8)", "sphinx-panels (>=0.6,<0.7)", "sphinxcontrib-apidoc (>=0.3,<0.4)"]
+docs = ["furo (>=2022.12.7,<2023.0.0)", "linkify-it-py (>=2.0,<3.0)", "myst-parser (>=1.0,<2.0)", "sphinx (>=5.0.2,<6.0.0)", "sphinx-autodoc-typehints (>=1.19)", "sphinx-automodapi (>=0.14)", "sphinx-copybutton (>=0.5)", "sphinx-design (>=0.2)", "sphinx-notfound-page (>=0.8)", "sphinxcontrib-apidoc (>=0.3)", "sphinxext-opengraph (>=0.6)"]
 dynamodb = ["boto3 (>=1.15)", "botocore (>=1.18)"]
-json = ["ujson (>=4.0)"]
+json = ["ujson (>=5.4)"]
 mongodb = ["pymongo (>=3)"]
 redis = ["redis (>=3)"]
 security = ["itsdangerous (>=2.0)"]
@@ -1697,4 +1686,4 @@ test = ["pytest", "pytest-cov"]
 [metadata]
 lock-version = "2.0"
 python-versions = "^3.9"
-content-hash = "9b1d8847f81f5a935d7a12a43cbf462173ddd6ebe64764b538a5f7ab53cce58f"
+content-hash = "eaaca6180d161500925dc49b864311cc90d1394d05f379e272679d672ba96aab"

pyproject.toml

@@ -15,7 +15,7 @@ python = "^3.9"
 pandas = {version = "^2.0.2", extras = ["feather", "performance"]}
 python-stdnum = "^1.18"
 requests = "^2.28.2"
-requests-cache = "^0.9.8"
+requests-cache = "^1.0.0"
 langid = "^1.1.6"
 colorama = "^0.4.6"
 ftfy = "^6.1.1"

setup.py

@@ -1,38 +0,0 @@
-import setuptools
-
-with open("README.md", "r") as fh:
-    long_description = fh.read()
-
-install_requires = [
-    "pandas",
-    "python-stdnum",
-    "requests",
-    "requests-cache",
-    "pycountry",
-    "langid",
-]
-
-setuptools.setup(
-    name="csv-metadata-quality",
-    version="0.6.1",
-    author="Alan Orth",
-    author_email="aorth@mjanja.ch",
-    description="A simple, but opinionated CSV quality checking and fixing pipeline for CSVs in the DSpace ecosystem.",
-    license="GPLv3",
-    long_description=long_description,
-    long_description_content_type="text/markdown",
-    url="https://github.com/alanorth/csv-metadata-quality",
-    classifiers=[
-        "Programming Language :: Python :: 3.9",
-        "Programming Language :: Python :: 3.10",
-        "Programming Language :: Python :: 3.11",
-        "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
-        "Operating System :: OS Independent",
-    ],
-    packages=["csv_metadata_quality"],
-    entry_points={
-        "console_scripts": ["csv-metadata-quality = csv_metadata_quality.__main__:main"]
-    },
-    include_package_data=True,
-    install_requires=install_requires,
-)