1
0
mirror of https://github.com/ilri/csv-metadata-quality.git synced 2024-06-09 13:25:08 +02:00
Commit Graph

483 Commits

Author SHA1 Message Date
330a7b7b9c
Don't unnecessarily rewrite DataFrames for checks
By using df[column] = df[column].apply(check...) we were re-writing
the DataFrame every time we returned from a check. We don't actuall
y need to return a value at all, as the point of checks is to print
a warning to the screen. In Python a "return" statement without a v
ariable returns None.

I haven't measured the impact of this, but I assume it will mean we
are faster and use less memory.
2021-03-16 16:04:19 +02:00
9a5e3fd6ef
README.md: Add TODO about detecting duplicates 2021-03-16 14:03:26 +02:00
ed084da08c
CHANGELOG.md: Add note about multi-value separators
All checks were successful
continuous-integration/drone/push Build is passing
2021-03-14 21:04:19 +02:00
10612cf891
Remove checks for invalid multi-value separators
Now that I no longer treat the fix for these as "unsafe" I don't a
ctually need to check for them—I can just fix them when I see them.
2021-03-14 21:01:21 +02:00
3656e9f976
Update CI workflows to use DCTERMS instead of DC
All checks were successful
continuous-integration/drone/push Build is passing
2021-03-14 15:52:51 +02:00
c9c277f8df
csv_metadata_quality/app.py: Update help text
All checks were successful
continuous-integration/drone/push Build is passing
Use DCTERMS fields where possible.
2021-03-14 10:52:58 +02:00
fb35afd937
CHANGELOG.md: Add note about requests cache 2021-03-14 09:13:51 +02:00
0e9176f0a6
csv_metadata_quality/check.py: requests cache
Allow overriding the directory for the requests cache. In the case
of csv-metadata-quality-web, which currently runs on Google's App
Engine, we can only write to /tmp.
2021-03-14 09:07:35 +02:00
1008acf35e
Always fix invalid multi-value separators
All checks were successful
continuous-integration/drone/push Build is passing
This is no longer class-ified as "unsafe" as I have yet to see a
case where this was intentional, and it always causes issues when
you import the data in a DSpace repository.
2021-03-13 12:59:45 +02:00
f00a07e2cd
README.md: Reorganize unsafe functionality
All checks were successful
continuous-integration/drone/push Build is passing
2021-03-13 11:56:52 +02:00
46098861ed
poetry.lock: Run poetry update
All checks were successful
continuous-integration/drone/push Build is passing
2021-03-11 22:45:32 +02:00
fa84cfa440
Bump version to 0.4.6-dev 2021-03-11 22:44:36 +02:00
6cc1401f88
pyproject.toml: Minimum Python is technically 3.7.1
All checks were successful
continuous-integration/drone/push Build is passing
See: https://pandas.pydata.org/pandas-docs/stable/whatsnew/v1.2.0.html
2021-03-11 13:41:58 +02:00
ad2cda8a41
README.md: Add note about SPDX license identifiers
All checks were successful
continuous-integration/drone/push Build is passing
2021-03-11 12:21:34 +02:00
dc6920802e
.github/workflows/python-app.yml: Use Python 3.9
I now use this version in my development environment. Eventually I
should add a matrix of versions to use, but I don't know the GitHub
Actions syntax well enough yet.
2021-03-11 12:17:57 +02:00
6ca449d8ed
README.md: Update note about Python 3.8 to 3.8+
Currently the lower bound on Python version support is 3.7 because
of Pandas 1.2.0 requiring it, but I use 3.9 on my development box.
2021-03-11 12:16:07 +02:00
1554cfd5c9
Version 0.4.6 2021-03-11 12:14:54 +02:00
00b8faad6d
CHANGELOG.md: Fix headers 2021-03-11 12:13:22 +02:00
b19d81abdd
.drone.yml: We need some stuff to build pyicu now
All checks were successful
continuous-integration/drone/push Build is passing
2021-03-11 12:07:28 +02:00
a0ea829f5c
csv_metadata_quality/fix.py: Fixes should be green 2021-03-11 11:47:24 +02:00
0089efa914
tests/test_check.py: Use dcterms.subject instead of dc.subject
Trying to move some old DC fields to DCTERMS.
2021-03-11 11:45:25 +02:00
3dbe656f9f
Update requirements
Some checks failed
continuous-integration/drone/push Build is failing
Generated with poetry export:

    $ poetry export --without-hashes -f requirements.txt > requirements.txt
    $ poetry export --without-hashes --dev -f requirements.txt > requirements-dev.txt

I am trying `--without-hashes` to work around an error on pip install
when running in CI:

    ERROR: In --require-hashes mode, all requirements must have
their versions pinned with ==.
2021-03-11 11:11:19 +02:00
7ad821dcad
CHANGELOG.md: Add note about poetry dependencies 2021-03-11 11:10:27 +02:00
cd876c4fb3
poetry.lock: Run poetry update 2021-03-11 11:10:02 +02:00
d88ea56488
csv_metadata_quality/check.py: Move all imports to top of file
PEP8 recommends keeping imports at the top of the file. Also, I had
to re-work the issn/isbn so they didn't conflict with the functions
in check.py (flake8 warned about them being redefined).

Imports sorted with isort.

See: https://www.python.org/dev/peps/pep-0008/#imports
2021-03-11 10:52:20 +02:00
e0e3ca6c58
CHANGELOG.md: Add notes about DCTERMS in data/test.csv 2021-03-11 10:50:52 +02:00
abae8ca4fb
data/test.csv: Move some DC fields to DCTERMS
The original Dublin Core elements set was superceded by DCTERMS in
2008 and we have started using them in our DSpace repository so I
think it's good to update them in our test data. Old DC fields are
still checked and fixed in this tool, though.

It's worth nothing that currently supported DSpace versions (4, 5,
and 6) all have hard-coded a few fields like dc.title internally so
we can't migrate those to their DCTERMS counterparts just yet.
2021-03-11 10:49:05 +02:00
d7d4d4efca
CHANGELOG.md: Add note about SPDX license identifiers 2021-03-11 10:37:27 +02:00
5318953150
tests/test_check.py: Add tests for licenses 2021-03-11 10:36:26 +02:00
3b17914002
data/test.csv: Add invalid SPDX license
Now we are checking dcterms.license against the list of SPDX license
identifiers using https://pypi.org/project/spdx-license-list/.
2021-03-11 10:34:58 +02:00
6e4b0e5c1b
Add validation of SPDX license identifiers
Currently this only checks the dcterms.license field and the result
will only be a warning.
2021-03-11 10:33:16 +02:00
b16fa9121f
pyproject.toml: Add csv-metadata-quality as a script
All checks were successful
continuous-integration/drone/push Build is passing
For some reason I stopped having csv-metadata-quality available in
my poetry environment after install. It seems I need to add it as a
poetry tool script? I had already done this in setup.py years ago,
which works for regular python setup.py installs, but hadn't needed
to do it in poetry for a year or more that I've been using it, until
now.
2021-03-08 09:50:05 +02:00
202bda862a
Bump version to 0.4.5
All checks were successful
continuous-integration/drone/push Build is passing
2021-03-04 21:38:10 +02:00
7479310ac0
setup.py: Bump version to 0.4.4
I missed to increase this when I actually released version 0.4.4 so
I will do it in a separate commit now before I bump the version to
0.4.5.
2021-03-04 21:35:08 +02:00
98a91bc9c2
Update requirements
Generated with poetry export:

    $ poetry export --without-hashes -f requirements.txt > requirements.txt
    $ poetry export --without-hashes --dev -f requirements.txt > requirements-dev.txt

I am trying `--without-hashes` to work around an error on pip install
when running in CI:

    ERROR: In --require-hashes mode, all requirements must have their versions pinned with ==.
2021-03-04 21:33:33 +02:00
fc5bedcc5c
CHANGELOG.md: Add poetry update 2021-03-04 21:32:46 +02:00
44d12d771a
poetry.lock: Run poetry update 2021-03-04 21:32:21 +02:00
4a7000e975
README.md: Add more ideas to do 2021-03-04 21:26:53 +02:00
27b2d81ca8
CHANGELOG.md: Add note about dcterms.issued
All checks were successful
continuous-integration/drone/push Build is passing
2021-02-28 15:14:39 +02:00
91ebd0f606
README.md: Update TODOs
A few of these date things have been addressed.
2021-02-28 15:13:36 +02:00
dd2cfae047
csv_metadata_quality/app.py: Match dcterms.issued for dates
We used to only check fields that had "date" in their name because
we were using DSpace's default dc.date.* fields. Now we are using
dcterms.issued so I will add that one as well.
2021-02-28 15:11:06 +02:00
d76e72532a
Move unreleased changes to v0.4.4
All checks were successful
continuous-integration/drone/push Build is passing
2021-02-21 13:25:22 +02:00
13980d2dde
CHANGELOG.md: Add note about colored output 2021-02-21 13:12:26 +02:00
9aaaa62461
Update requirements
All checks were successful
continuous-integration/drone/push Build is passing
Generated with poetry export:

    $ poetry export --without-hashes -f requirements.txt > requirements.txt
    $ poetry export --without-hashes --dev -f requirements.txt > requirements-dev.txt

I am trying `--without-hashes` to work around an error on pip install
when running in CI:

    ERROR: In --require-hashes mode, all requirements must have their versions pinned with ==.
2021-02-21 13:10:52 +02:00
a7fc5a246c
Colorize output
Some checks failed
continuous-integration/drone/push Build is failing
Messages will be colorized:

- Red for errors
- Yellow for warnings or information
- Green for fixes
2021-02-21 13:01:25 +02:00
7fb8acb866
Add colorama for colored output
Red for errors, yellow for warnings or information, and green for
fixes.
2021-02-21 13:00:31 +02:00
9f5d2c2c4f
poetry.lock: Run poetry update
All checks were successful
continuous-integration/drone/push Build is passing
2021-02-15 15:13:12 +02:00
202abf140c
CHANGELOG.md: Add note about poetry
All checks were successful
continuous-integration/drone/push Build is passing
2021-02-04 21:48:12 +02:00
0cd6d3dfe6
Update requirements
Generated with poetry export:

    $ poetry export --without-hashes -f requirements.txt > requirements.txt
    $ poetry export --without-hashes --dev -f requirements.txt > requirements-dev.txt

I am trying `--without-hashes` to work around an error on pip install
when running in CI:

    ERROR: In --require-hashes mode, all requirements must have their versions pinned with ==.
2021-02-04 21:46:49 +02:00
a458beac55
poetry.lock: Run poetry update 2021-02-04 21:45:30 +02:00