248 lines
8.3 KiB
HTML
248 lines
8.3 KiB
HTML
<!DOCTYPE html>
|
|
<html lang="en" >
|
|
|
|
<head>
|
|
<meta charset="utf-8">
|
|
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
|
|
|
|
|
|
<meta property="og:title" content="January, 2022" />
|
|
<meta property="og:description" content="2022-01-01
|
|
|
|
Start a full harvest on AReS
|
|
" />
|
|
<meta property="og:type" content="article" />
|
|
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2022-01/" />
|
|
<meta property="article:published_time" content="2022-01-01T15:20:54+02:00" />
|
|
<meta property="article:modified_time" content="2022-01-06T15:48:27+02:00" />
|
|
|
|
|
|
|
|
<meta name="twitter:card" content="summary"/>
|
|
<meta name="twitter:title" content="January, 2022"/>
|
|
<meta name="twitter:description" content="2022-01-01
|
|
|
|
Start a full harvest on AReS
|
|
"/>
|
|
<meta name="generator" content="Hugo 0.91.2" />
|
|
|
|
|
|
|
|
<script type="application/ld+json">
|
|
{
|
|
"@context": "http://schema.org",
|
|
"@type": "BlogPosting",
|
|
"headline": "January, 2022",
|
|
"url": "https://alanorth.github.io/cgspace-notes/2022-01/",
|
|
"wordCount": "263",
|
|
"datePublished": "2022-01-01T15:20:54+02:00",
|
|
"dateModified": "2022-01-06T15:48:27+02:00",
|
|
"author": {
|
|
"@type": "Person",
|
|
"name": "Alan Orth"
|
|
},
|
|
"keywords": "Notes"
|
|
}
|
|
</script>
|
|
|
|
|
|
|
|
<link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2022-01/">
|
|
|
|
<title>January, 2022 | CGSpace Notes</title>
|
|
|
|
|
|
<!-- combined, minified CSS -->
|
|
|
|
<link href="https://alanorth.github.io/cgspace-notes/css/style.beb8012edc08ba10be012f079d618dc243812267efe62e11f22fe49618f976a4.css" rel="stylesheet" integrity="sha256-vrgBLtwIuhC+AS8HnWGNwkOBImfv5i4R8i/klhj5dqQ=" crossorigin="anonymous">
|
|
|
|
|
|
<!-- minified Font Awesome for SVG icons -->
|
|
|
|
<script defer src="https://alanorth.github.io/cgspace-notes/js/fontawesome.min.f5072c55a0721857184db93a50561d7dc13975b4de2e19db7f81eb5f3fa57270.js" integrity="sha256-9QcsVaByGFcYTbk6UFYdfcE5dbTeLhnbf4HrXz+lcnA=" crossorigin="anonymous"></script>
|
|
|
|
<!-- RSS 2.0 feed -->
|
|
|
|
|
|
|
|
|
|
</head>
|
|
|
|
<body>
|
|
|
|
|
|
<div class="blog-masthead">
|
|
<div class="container">
|
|
<nav class="nav blog-nav">
|
|
<a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
|
|
</nav>
|
|
</div>
|
|
</div>
|
|
|
|
|
|
|
|
|
|
<header class="blog-header">
|
|
<div class="container">
|
|
<h1 class="blog-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
|
|
<p class="lead blog-description" dir="auto">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
|
|
</div>
|
|
</header>
|
|
|
|
|
|
|
|
|
|
<div class="container">
|
|
<div class="row">
|
|
<div class="col-sm-8 blog-main">
|
|
|
|
|
|
|
|
|
|
<article class="blog-post">
|
|
<header>
|
|
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2022-01/">January, 2022</a></h2>
|
|
<p class="blog-post-meta">
|
|
<time datetime="2022-01-01T15:20:54+02:00">Sat Jan 01, 2022</time>
|
|
in
|
|
<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
|
|
|
|
|
|
</p>
|
|
</header>
|
|
<h2 id="2022-01-01">2022-01-01</h2>
|
|
<ul>
|
|
<li>Start a full harvest on AReS</li>
|
|
</ul>
|
|
<h2 id="2022-01-06">2022-01-06</h2>
|
|
<ul>
|
|
<li>Add ORCID identifier for Chris Jones to CGSpace
|
|
<ul>
|
|
<li>Also tag eighty-eight of his items in CGSpace:</li>
|
|
</ul>
|
|
</li>
|
|
</ul>
|
|
<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4"><code class="language-console" data-lang="console">$ cat 2022-01-06-add-orcids.csv
|
|
dc.contributor.author,cg.creator.identifier
|
|
"Jones, Chris","Chris Jones: 0000-0001-9096-9728"
|
|
"Jones, Christopher S.","Chris Jones: 0000-0001-9096-9728"
|
|
$ ./ilri/add-orcid-identifiers-csv.py -i 2022-01-06-add-orcids.csv -db dspace63 -u dspacetest -p <span style="color:#e6db74">'dom@in34sniper'</span>
|
|
</code></pre></div><h2 id="2022-01-09">2022-01-09</h2>
|
|
<ul>
|
|
<li>Validate and register CGSpace on <a href="https://www.openarchives.org/Register/ValidateSite?log=Z2V7WCT7">OpenArchives</a>
|
|
<ul>
|
|
<li>Last month IWMI colleagues were asking me to look into this, and after checking the OpenArchives mailing list it seems there was a problem on the server side</li>
|
|
<li>Now it has worked and the message is “Successfully updated OAI registration database to status COMPLIANT.”</li>
|
|
<li>I received an email (as the Admin contact on our OAI) that says:</li>
|
|
</ul>
|
|
</li>
|
|
</ul>
|
|
<blockquote>
|
|
<p>Your repository has been registered in the OAI database of conforming repositories.</p>
|
|
</blockquote>
|
|
<ul>
|
|
<li>Now I’m taking a screenshot of the validation page for posterity, because the logs seem to go away after some time</li>
|
|
</ul>
|
|
<p><img src="/cgspace-notes/2022/01/openarchives-registration.png" alt="OpenArchives.org registration"></p>
|
|
<ul>
|
|
<li>I tried to re-build the Docker image for OpenRXV and got an error in the backend:</li>
|
|
</ul>
|
|
<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4"><code class="language-console" data-lang="console">...
|
|
> openrxv-backend@0.0.1 build
|
|
> nest build
|
|
<span style="color:#960050;background-color:#1e0010">
|
|
</span><span style="color:#960050;background-color:#1e0010"></span>node_modules/@elastic/elasticsearch/api/types.d.ts:2454:13 - error TS2456: Type alias 'AggregationsAggregate' circularly references itself.
|
|
<span style="color:#960050;background-color:#1e0010">
|
|
</span><span style="color:#960050;background-color:#1e0010"></span>2454 export type AggregationsAggregate = AggregationsSingleBucketAggregate | AggregationsAutoDateHistogramAggregate | AggregationsFiltersAggregate | AggregationsSignificantTermsAggregate<any> | AggregationsTermsAggregate<any> | AggregationsBucketAggregate | AggregationsCompositeBucketAggregate | AggregationsMultiBucketAggregate<AggregationsBucket> | AggregationsMatrixStatsAggregate | AggregationsKeyedValueAggregate | AggregationsMetricAggregate
|
|
~~~~~~~~~~~~~~~~~~~~~
|
|
node_modules/@elastic/elasticsearch/api/types.d.ts:3209:13 - error TS2456: Type alias 'AggregationsSingleBucketAggregate' circularly references itself.
|
|
<span style="color:#960050;background-color:#1e0010">
|
|
</span><span style="color:#960050;background-color:#1e0010"></span>3209 export type AggregationsSingleBucketAggregate = AggregationsSingleBucketAggregateKeys
|
|
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
|
|
<span style="color:#960050;background-color:#1e0010">
|
|
</span><span style="color:#960050;background-color:#1e0010"></span>Found 2 error(s).
|
|
</code></pre></div><ul>
|
|
<li>Ah, it seems the code on the server was slightly out of date
|
|
<ul>
|
|
<li>I checked out the latest master branch and it built</li>
|
|
</ul>
|
|
</li>
|
|
</ul>
|
|
<h2 id="2022-01-12">2022-01-12</h2>
|
|
<ul>
|
|
<li>Fix some citation formatting issues in Gaia’s <a href="https://dspacetest.cgiar.org/handle/10568/115230">eighteen CAS Green Cover publications on DSpace Test</a></li>
|
|
</ul>
|
|
<!-- raw HTML omitted -->
|
|
|
|
|
|
|
|
|
|
|
|
</article>
|
|
|
|
|
|
|
|
</div> <!-- /.blog-main -->
|
|
|
|
<aside class="col-sm-3 ml-auto blog-sidebar">
|
|
|
|
|
|
|
|
<section class="sidebar-module">
|
|
<h4>Recent Posts</h4>
|
|
<ol class="list-unstyled">
|
|
|
|
|
|
<li><a href="/cgspace-notes/2022-01/">January, 2022</a></li>
|
|
|
|
<li><a href="/cgspace-notes/2021-12/">December, 2021</a></li>
|
|
|
|
<li><a href="/cgspace-notes/2021-11/">November, 2021</a></li>
|
|
|
|
<li><a href="/cgspace-notes/2021-10/">October, 2021</a></li>
|
|
|
|
<li><a href="/cgspace-notes/2021-09/">September, 2021</a></li>
|
|
|
|
</ol>
|
|
</section>
|
|
|
|
|
|
|
|
|
|
<section class="sidebar-module">
|
|
<h4>Links</h4>
|
|
<ol class="list-unstyled">
|
|
|
|
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
|
|
|
|
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
|
|
|
|
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
|
|
|
|
</ol>
|
|
</section>
|
|
|
|
</aside>
|
|
|
|
|
|
</div> <!-- /.row -->
|
|
</div> <!-- /.container -->
|
|
|
|
|
|
|
|
<footer class="blog-footer">
|
|
<p dir="auto">
|
|
|
|
Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
|
|
|
|
</p>
|
|
<p>
|
|
<a href="#">Back to top</a>
|
|
</p>
|
|
</footer>
|
|
|
|
|
|
</body>
|
|
|
|
</html>
|