cgspace-notes/docs/2019-03/index.html

276 lines
9.5 KiB
HTML
Raw Blame History

This file contains ambiguous Unicode characters

This file contains Unicode characters that might be confused with other characters. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
<meta property="og:title" content="March, 2019" />
<meta property="og:description" content="2019-03-01
I checked IITA&rsquo;s 259 Feb 14 records from last month for duplicates using Atmire&rsquo;s Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good
I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;
Looking at the other half of Udana&rsquo;s WLE records from 2018-11
I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)
I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items
Most worryingly, there are encoding errors in the abstracts for eleven items, for example:
68.15% <20> 9.45 instead of 68.15% ± 9.45
2003<EFBFBD>2013 instead of 20032013
I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs
" />
<meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-03/" />
<meta property="article:published_time" content="2019-03-01T12:16:30&#43;01:00"/>
<meta property="article:modified_time" content="2019-03-06T16:45:43&#43;02:00"/>
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="March, 2019"/>
<meta name="twitter:description" content="2019-03-01
I checked IITA&rsquo;s 259 Feb 14 records from last month for duplicates using Atmire&rsquo;s Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good
I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;
Looking at the other half of Udana&rsquo;s WLE records from 2018-11
I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)
I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items
Most worryingly, there are encoding errors in the abstracts for eleven items, for example:
68.15% <20> 9.45 instead of 68.15% ± 9.45
2003<EFBFBD>2013 instead of 20032013
I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs
"/>
<meta name="generator" content="Hugo 0.54.0" />
<script type="application/ld+json">
{
"@context": "http://schema.org",
"@type": "BlogPosting",
"headline": "March, 2019",
"url": "https://alanorth.github.io/cgspace-notes/2019-03/",
"wordCount": "499",
"datePublished": "2019-03-01T12:16:30&#43;01:00",
"dateModified": "2019-03-06T16:45:43&#43;02:00",
"author": {
"@type": "Person",
"name": "Alan Orth"
},
"keywords": "Notes"
}
</script>
<link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2019-03/">
<title>March, 2019 | CGSpace Notes</title>
<!-- combined, minified CSS -->
<link href="https://alanorth.github.io/cgspace-notes/css/style.css" rel="stylesheet" integrity="sha384-G5B34w7DFTumWTswxYzTX7NWfbvQEg1HbFFEg6ItN03uTAAoS2qkPS/fu3LhuuSA" crossorigin="anonymous">
</head>
<body>
<div class="blog-masthead">
<div class="container">
<nav class="nav blog-nav">
<a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
</nav>
</div>
</div>
<header class="blog-header">
<div class="container">
<h1 class="blog-title"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
<p class="lead blog-description">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
</div>
</header>
<div class="container">
<div class="row">
<div class="col-sm-8 blog-main">
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-03-01">2019-03-01</h2>
<ul>
<li>I checked IITA&rsquo;s 259 Feb 14 records from last month for duplicates using Atmire&rsquo;s Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
<li>Looking at the other half of Udana&rsquo;s WLE records from 2018-11
<ul>
<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
<li>2003<EFBFBD>2013 instead of 20032013</li>
</ul></li>
<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
</ul>
<h2 id="2019-03-03">2019-03-03</h2>
<ul>
<li>Trying to finally upload IITA&rsquo;s 259 Feb 14 items to CGSpace so I exported them from DSpace Test:</li>
</ul>
<pre><code>$ mkdir 2019-03-03-IITA-Feb14
$ dspace export -i 10568/108684 -t COLLECTION -m -n 0 -d 2019-03-03-IITA-Feb14
</code></pre>
<ul>
<li>As I was inspecting the archive I noticed that there were some problems with the bitsreams:
<ul>
<li>First, Sisay didn&rsquo;t include the bitstream descriptions</li>
<li>Second, only five items had bitstreams and I remember in the discussion with IITA that there should have been nine!</li>
<li>I had to refer to the original CSV from January to find the file names, then download and add them to the export contents manually!</li>
</ul></li>
<li>After adding the missing bitstreams and descriptions manually I tested them again locally, then imported them to a temporary collection on CGSpace:</li>
</ul>
<pre><code>$ dspace import -a -c 10568/99832 -e aorth@stfu.com -m 2019-03-03-IITA-Feb14.map -s /tmp/2019-03-03-IITA-Feb14
</code></pre>
<ul>
<li>DSpace&rsquo;s export function doesn&rsquo;t include the collections for some reason, so you need to import them somewhere first, then export the collection metadata and re-map the items to proper owning collections based on their types using OpenRefine or something</li>
<li>After re-importing to CGSpace to apply the mappings, I deleted the collection on DSpace Test and ran the <code>dspace cleanup</code> script</li>
<li>Merge the IITA research theme changes from last month to the <code>5_x-prod</code> branch (<a href="https://github.com/ilri/DSpace/pull/413">#413</a>)
<ul>
<li>I will deploy to CGSpace soon and then think about how to batch tag all IITA&rsquo;s existing items with this metadata</li>
</ul></li>
<li>Deploy Tomcat 7.0.93 on CGSpace (linode18) after having tested it on DSpace Test (linode19) for a week</li>
</ul>
<h2 id="2019-03-06">2019-03-06</h2>
<ul>
<li>Abenet was having problems with a CIP user account, I think that the user could not register</li>
<li>I suspect it&rsquo;s related to the email issue that ICT hasn&rsquo;t responded about since last week</li>
<li>As I thought, I still cannot send emails from CGSpace:</li>
</ul>
<pre><code>$ dspace test-email
About to send test email:
- To: blah@stfu.com
- Subject: DSpace test email
- Server: smtp.office365.com
Error sending email:
- Error: javax.mail.AuthenticationFailedException
</code></pre>
<ul>
<li>I will send a follow-up to ICT to ask them to reset the password</li>
</ul>
<!-- vim: set sw=2 ts=2: -->
</article>
</div> <!-- /.blog-main -->
<aside class="col-sm-3 ml-auto blog-sidebar">
<section class="sidebar-module">
<h4>Recent Posts</h4>
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
<li><a href="/cgspace-notes/2018-12/">December, 2018</a></li>
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
</ol>
</section>
<section class="sidebar-module">
<h4>Links</h4>
<ol class="list-unstyled">
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
</ol>
</section>
</aside>
</div> <!-- /.row -->
</div> <!-- /.container -->
<footer class="blog-footer">
<p>
Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
</p>
<p>
<a href="#">Back to top</a>
</p>
</footer>
</body>
</html>