mirror of
https://github.com/alanorth/cgspace-notes.git
synced 2024-11-05 06:43:00 +01:00
332 lines
10 KiB
HTML
332 lines
10 KiB
HTML
<!DOCTYPE html>
|
|
<html lang="en">
|
|
|
|
<head>
|
|
<meta charset="utf-8">
|
|
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
|
|
|
|
<meta property="og:title" content="April, 2017" />
|
|
<meta property="og:description" content="2017-04-02
|
|
|
|
|
|
Merge one change to CCAFS flagships that I had forgotten to remove last month (“MANAGING CLIMATE RISK”): https://github.com/ilri/DSpace/pull/317
|
|
Quick proof-of-concept hack to add dc.rights to the input form, including some inline instructions/hints:
|
|
|
|
|
|
|
|
|
|
|
|
Remove redundant/duplicate text in the DSpace submission license
|
|
Testing the CMYK patch on a collection with 650 items:
|
|
|
|
|
|
$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p "ImageMagick PDF Thumbnail" -v >& /tmp/filter-media-cmyk.txt
|
|
|
|
|
|
" />
|
|
<meta property="og:type" content="article" />
|
|
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2017-04/" />
|
|
|
|
|
|
|
|
<meta property="article:published_time" content="2017-04-02T17:08:52+02:00"/>
|
|
<meta property="article:modified_time" content="2017-04-06T09:53:00+03:00"/>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<meta name="twitter:card" content="summary"/>
|
|
|
|
|
|
|
|
<meta name="twitter:text:title" content="April, 2017"/>
|
|
<meta name="twitter:title" content="April, 2017"/>
|
|
<meta name="twitter:description" content="2017-04-02
|
|
|
|
|
|
Merge one change to CCAFS flagships that I had forgotten to remove last month (“MANAGING CLIMATE RISK”): https://github.com/ilri/DSpace/pull/317
|
|
Quick proof-of-concept hack to add dc.rights to the input form, including some inline instructions/hints:
|
|
|
|
|
|
|
|
|
|
|
|
Remove redundant/duplicate text in the DSpace submission license
|
|
Testing the CMYK patch on a collection with 650 items:
|
|
|
|
|
|
$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p "ImageMagick PDF Thumbnail" -v >& /tmp/filter-media-cmyk.txt
|
|
|
|
|
|
"/>
|
|
|
|
<meta name="generator" content="Hugo 0.19" />
|
|
|
|
|
|
|
|
<script type="application/ld+json">
|
|
{
|
|
"@context": "http://schema.org",
|
|
"@type": "BlogPosting",
|
|
"headline": "April, 2017",
|
|
"url": "https://alanorth.github.io/cgspace-notes/2017-04/",
|
|
"wordCount": "558",
|
|
"datePublished": "2017-04-02T17:08:52+02:00",
|
|
"dateModified": "2017-04-06T09:53:00+03:00",
|
|
"author": {
|
|
"@type": "Person",
|
|
"name": "Alan Orth"
|
|
},
|
|
"keywords": "Notes"
|
|
}
|
|
</script>
|
|
|
|
|
|
|
|
<link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2017-04/">
|
|
|
|
<title>April, 2017 | CGSpace Notes</title>
|
|
|
|
<!-- combined, minified CSS -->
|
|
<link href="https://alanorth.github.io/cgspace-notes/css/style.css" rel="stylesheet" integrity="sha384-KgZMa5t4zn+0nHuId9vV0Oqe9qSvqAhmtw588G8XKQmOFtA+y4ZkRl2JPMhw1dsN" crossorigin="anonymous">
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
</head>
|
|
|
|
<body>
|
|
|
|
<div class="blog-masthead">
|
|
<div class="container">
|
|
<nav class="nav blog-nav">
|
|
<a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
|
|
|
|
|
|
</nav>
|
|
</div>
|
|
</div>
|
|
|
|
<header class="blog-header">
|
|
<div class="container">
|
|
<h1 class="blog-title"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
|
|
<p class="lead blog-description">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
|
|
</div>
|
|
</header>
|
|
|
|
<div class="container">
|
|
<div class="row">
|
|
<div class="col-sm-8 blog-main">
|
|
|
|
|
|
|
|
|
|
<article class="blog-post">
|
|
<header>
|
|
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
|
|
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52+02:00">Sun Apr 02, 2017</time> by Alan Orth in
|
|
|
|
<i class="fa fa-tag" aria-hidden="true"></i> <a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
|
|
|
|
</p>
|
|
</header>
|
|
<h2 id="2017-04-02">2017-04-02</h2>
|
|
|
|
<ul>
|
|
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (“MANAGING CLIMATE RISK”): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
|
|
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
|
|
</ul>
|
|
|
|
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
|
|
|
|
<ul>
|
|
<li>Remove redundant/duplicate text in the DSpace submission license</li>
|
|
<li>Testing the CMYK patch on a collection with 650 items:</li>
|
|
</ul>
|
|
|
|
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p "ImageMagick PDF Thumbnail" -v >& /tmp/filter-media-cmyk.txt
|
|
</code></pre>
|
|
|
|
<p></p>
|
|
|
|
<h2 id="2017-04-03">2017-04-03</h2>
|
|
|
|
<ul>
|
|
<li>Continue testing the CMYK patch on more communities:</li>
|
|
</ul>
|
|
|
|
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/1 -p "ImageMagick PDF Thumbnail" -v >> /tmp/filter-media-cmyk.txt 2>&1
|
|
</code></pre>
|
|
|
|
<ul>
|
|
<li>So far there are almost 500:</li>
|
|
</ul>
|
|
|
|
<pre><code>$ grep -c profile /tmp/filter-media-cmyk.txt
|
|
484
|
|
</code></pre>
|
|
|
|
<ul>
|
|
<li>Looking at the CG Core document again, I’ll send some feedback to Peter and Abenet:
|
|
|
|
<ul>
|
|
<li>We use cg.contributor.crp to indicate the CRP(s) affiliated with the item</li>
|
|
<li>DSpace has dc.date.available, but this field isn’t particularly meaningful other than as an automatic timestamp at the time of item accession (and is identical to dc.date.accessioned)</li>
|
|
<li>dc.relation exists in CGSpace, but isn’t used—rather dc.relation.ispartofseries, which is used ~5,000 times to Series name and number within that series</li>
|
|
</ul></li>
|
|
<li>Also, I’m noticing some weird outliers in <code>cg.coverage.region</code>, need to remember to go correct these later:</li>
|
|
</ul>
|
|
|
|
<pre><code>dspace=# select text_value from metadatavalue where resource_type_id=2 and metadata_field_id=227;
|
|
</code></pre>
|
|
|
|
<h2 id="2017-04-04">2017-04-04</h2>
|
|
|
|
<ul>
|
|
<li>The <code>filter-media</code> script has been running on more large communities and now there are many more CMYK PDFs that have been fixed:</li>
|
|
</ul>
|
|
|
|
<pre><code>$ grep -c profile /tmp/filter-media-cmyk.txt
|
|
1584
|
|
</code></pre>
|
|
|
|
<ul>
|
|
<li>Trying to find a way to get the number of items submitted by a certain user in 2016</li>
|
|
<li>It’s not possible in the DSpace search / module interfaces, but might be able to be derived from <code>dc.description.provenance</code>, as that field contains the name and email of the submitter/approver, ie:</li>
|
|
</ul>
|
|
|
|
<pre><code>Submitted by Francesca Giampieri (fgiampieri) on 2016-01-19T13:56:43Z^M
|
|
No. of bitstreams: 1^M
|
|
ILAC_Brief21_PMCA.pdf: 113462 bytes, checksum: 249fef468f401c066a119f5db687add0 (MD5)
|
|
</code></pre>
|
|
|
|
<ul>
|
|
<li>This SQL query returns fields that were submitted or approved by giampieri in 2016 and contain a “checksum” (ie, there was a bitstream in the submission):</li>
|
|
</ul>
|
|
|
|
<pre><code>dspace=# select * from metadatavalue where resource_type_id=2 and metadata_field_id=28 and text_value ~ '^(Submitted|Approved).*giampieri.*2016-.*checksum.*';
|
|
</code></pre>
|
|
|
|
<ul>
|
|
<li>Then this one does the same, but for fields that don’t contain checksums (ie, there was no bitstream in the submission):</li>
|
|
</ul>
|
|
|
|
<pre><code>dspace=# select * from metadatavalue where resource_type_id=2 and metadata_field_id=28 and text_value ~ '^(Submitted|Approved).*giampieri.*2016-.*' and text_value !~ '^(Submitted|Approved).*giampieri.*2016-.*checksum.*';
|
|
</code></pre>
|
|
|
|
<ul>
|
|
<li>For some reason there seem to be way too many fields, for example there are 498 + 13 here, which is 511 items for just this one user.</li>
|
|
<li>It looks like there can be a scenario where the user submitted AND approved it, so some records might be doubled…</li>
|
|
<li>In that case it might just be better to see how many the user submitted (both <em>with</em> and <em>without</em> bitstreams):</li>
|
|
</ul>
|
|
|
|
<pre><code>dspace=# select * from metadatavalue where resource_type_id=2 and metadata_field_id=28 and text_value ~ '^Submitted.*giampieri.*2016-.*';
|
|
</code></pre>
|
|
|
|
<h2 id="2017-04-05">2017-04-05</h2>
|
|
|
|
<ul>
|
|
<li>After doing a few more large communities it seems this is the final count of CMYK PDFs:</li>
|
|
</ul>
|
|
|
|
<pre><code>$ grep -c profile /tmp/filter-media-cmyk.txt
|
|
2505
|
|
</code></pre>
|
|
|
|
<h2 id="2017-04-06">2017-04-06</h2>
|
|
|
|
<ul>
|
|
<li>After reading the <a href="https://wiki.duraspace.org/display/cmtygp/DCAT+Meeting+April+2017">notes for DCAT April 2017</a> I am testing some new settings for PostgreSQL on DSpace Test:
|
|
|
|
<ul>
|
|
<li><code>db.maxconnections</code> 30→70 (the default PostgreSQL config allows 100 connections, so DSpace’s default of 30 is quite low)</li>
|
|
<li><code>db.maxwait</code> 5000→10000</li>
|
|
<li><code>db.maxidle</code> 8→20 (DSpace default is -1, unlimited, but we had set it to 8 earlier)</li>
|
|
</ul></li>
|
|
<li>I need to look at the Munin graphs after a few days to see if the load has changed</li>
|
|
<li>Run system updates on DSpace Test and reboot the server</li>
|
|
</ul>
|
|
|
|
|
|
|
|
|
|
|
|
</article>
|
|
|
|
|
|
|
|
</div> <!-- /.blog-main -->
|
|
|
|
<aside class="col-sm-3 offset-sm-1 blog-sidebar">
|
|
|
|
|
|
|
|
<section class="sidebar-module">
|
|
<h4>Recent Posts</h4>
|
|
<ol class="list-unstyled">
|
|
|
|
|
|
<li><a href="/cgspace-notes/2017-04/">April, 2017</a></li>
|
|
|
|
<li><a href="/cgspace-notes/2017-03/">March, 2017</a></li>
|
|
|
|
<li><a href="/cgspace-notes/2017-02/">February, 2017</a></li>
|
|
|
|
<li><a href="/cgspace-notes/2017-01/">January, 2017</a></li>
|
|
|
|
<li><a href="/cgspace-notes/2016-12/">December, 2016</a></li>
|
|
|
|
</ol>
|
|
</section>
|
|
|
|
|
|
|
|
|
|
<section class="sidebar-module">
|
|
<h4>Links</h4>
|
|
<ol class="list-unstyled">
|
|
|
|
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
|
|
|
|
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
|
|
|
|
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
|
|
|
|
</ol>
|
|
</section>
|
|
|
|
</aside>
|
|
|
|
|
|
</div> <!-- /.row -->
|
|
</div> <!-- /.container -->
|
|
|
|
<footer class="blog-footer">
|
|
<p>
|
|
|
|
Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
|
|
|
|
</p>
|
|
<p>
|
|
<a href="#">Back to top</a>
|
|
</p>
|
|
</footer>
|
|
|
|
</body>
|
|
|
|
</html>
|