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<h1 class="blog-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
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<p class="lead blog-description" dir="auto">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
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<article class="blog-post">
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2023-07/">July, 2023</a></h2>
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<p class="blog-post-meta"><time datetime="2023-07-01T17:14:36+03:00">Sat Jul 01, 2023</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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2023-07-01 Export CGSpace to check for missing Initiative collection mappings Start harvesting on AReS 2023-07-02 Minor edits to the crossref_doi_lookup.py script while running some checks from 22,000 CGSpace DOIs 2023-07-03 I analyzed the licenses declared by Crossref and found with high confidence that ~400 of ours were incorrect I took the more accurate ones from Crossref and updated the items on CGSpace I took a few hundred ISBNs as well for where we were missing them I also tagged ~4,700 items with missing licenses as “Copyrighted; all rights reserved” based on their Crossref license status being TDM, mostly from Elsevier, Wiley, and Springer Checking a dozen or so manually, I confirmed that if Crossref only has a TDM license then it’s usually copyrighted (could still be open access, but we can’t tell via Crossref) I would be curious to write a script to check the Unpaywall API for open access status… In the past I found that their license status was not very accurate, but the open access status might be more reliable More minor work on the DSpace 7 item views I learned some new Angular template syntax I created a custom component to show Creative Commons licenses on the simple item page I also decided that I don’t like the Impact Area icons as a component because they don’t have any visual meaning
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<a href='https://alanorth.github.io/cgspace-notes/2023-07/'>Read more →</a>
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</article>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2023-06/">June, 2023</a></h2>
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<p class="blog-post-meta"><time datetime="2023-06-02T10:29:36+03:00">Fri Jun 02, 2023</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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<h2 id="2023-06-02">2023-06-02</h2>
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<ul>
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<li>Spend some time testing my <code>post_bitstreams.py</code> script to update thumbnails for items on CGSpace
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<ul>
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<li>Interestingly I found an item with a JFIF thumbnail and another with a WebP thumbnail…</li>
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</ul>
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</li>
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<li>Meeting with Valentina, Stefano, and Sara about MODS metadata in CGSpace
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<ul>
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<li>They have experience with improving the MODS interface in MELSpace’s OAI-PMH for use with AGRIS and were curious if we could do the same in CGSpace</li>
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<li>From what I can see we need to upgrade the MODS schema from 3.1 to 3.7 and then just add a bunch of our fields to the crosswalk</li>
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</ul>
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</li>
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</ul>
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<a href='https://alanorth.github.io/cgspace-notes/2023-06/'>Read more →</a>
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</article>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2023-05/">May, 2023</a></h2>
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<p class="blog-post-meta"><time datetime="2023-05-03T08:53:36+03:00">Wed May 03, 2023</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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<h2 id="2023-05-03">2023-05-03</h2>
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<ul>
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<li>Alliance’s TIP team emailed me to ask about issues authenticating on CGSpace
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<ul>
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<li>It seems their password expired, which is annoying</li>
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</ul>
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</li>
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<li>I continued looking at the CGSpace subjects for the FAO / AGROVOC exercise that I started last week
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<ul>
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<li>There are many of our subjects that would match if they added a “-” like “high yielding varieties” or used singular…</li>
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<li>Also I found at least two spelling mistakes, for example “decison support systems”, which would match if it was spelled correctly</li>
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</ul>
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</li>
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<li>Work on cleaning, proofing, and uploading twenty-seven records for IFPRI to CGSpace</li>
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</ul>
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<a href='https://alanorth.github.io/cgspace-notes/2023-05/'>Read more →</a>
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</article>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2023-04/">April, 2023</a></h2>
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<p class="blog-post-meta"><time datetime="2023-04-02T08:19:36+03:00">Sun Apr 02, 2023</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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<h2 id="2023-04-02">2023-04-02</h2>
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<ul>
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<li>Run all system updates on CGSpace and reboot it</li>
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<li>I exported CGSpace to CSV to check for any missing Initiative collection mappings
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<ul>
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<li>I also did a check for missing country/region mappings with csv-metadata-quality</li>
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</ul>
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</li>
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<li>Start a harvest on AReS</li>
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</ul>
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<a href='https://alanorth.github.io/cgspace-notes/2023-04/'>Read more →</a>
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</article>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2023-03/">March, 2023</a></h2>
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<p class="blog-post-meta"><time datetime="2023-03-01T07:58:36+03:00">Wed Mar 01, 2023</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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<h2 id="2023-03-01">2023-03-01</h2>
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<ul>
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<li>Remove <code>cg.subject.wle</code> and <code>cg.identifier.wletheme</code> from CGSpace input form after confirming with IWMI colleagues that they no longer need them (WLE closed in 2021)</li>
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<li><a href="https://salsa.debian.org/iso-codes-team/iso-codes/-/blob/main/CHANGELOG.md#4130-2023-02-28">iso-codes 4.13.0 was released</a>, which incorporates my changes to the common names for Iran, Laos, and Syria</li>
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<li>I finally got through with porting the input form from DSpace 6 to DSpace 7</li>
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</ul>
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<a href='https://alanorth.github.io/cgspace-notes/2023-03/'>Read more →</a>
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</article>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2023-02/">February, 2023</a></h2>
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<p class="blog-post-meta"><time datetime="2023-02-01T10:57:36+03:00">Wed Feb 01, 2023</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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</p>
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<h2 id="2023-02-01">2023-02-01</h2>
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<ul>
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<li>Export CGSpace to cross check the DOI metadata with Crossref
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<ul>
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<li>I want to try to expand my use of their data to journals, publishers, volumes, issues, etc…</li>
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</ul>
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</li>
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</ul>
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<a href='https://alanorth.github.io/cgspace-notes/2023-02/'>Read more →</a>
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</article>
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<article class="blog-post">
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2023-01/">January, 2023</a></h2>
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<p class="blog-post-meta"><time datetime="2023-01-01T08:44:36+03:00">Sun Jan 01, 2023</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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<h2 id="2023-01-01">2023-01-01</h2>
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<ul>
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<li>Apply some more ORCID identifiers to items on CGSpace using my <code>2022-09-22-add-orcids.csv</code> file
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<ul>
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<li>I want to update all ORCID names and refresh them in the database</li>
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<li>I see we have some new ones that aren’t in our list if I combine with this file:</li>
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</ul>
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</li>
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</ul>
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<a href='https://alanorth.github.io/cgspace-notes/2023-01/'>Read more →</a>
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</article>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2022-12/">December, 2022</a></h2>
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<p class="blog-post-meta"><time datetime="2022-12-01T08:52:36+03:00">Thu Dec 01, 2022</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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<h2 id="2022-12-01">2022-12-01</h2>
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<ul>
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<li>Fix some incorrect regions on CGSpace
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<ul>
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<li>I exported the CCAFS and IITA communities, extracted just the country and region columns, then ran them through csv-metadata-quality to fix the regions</li>
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</ul>
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</li>
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<li>Add a few more authors to my CSV with author names and ORCID identifiers and tag 283 items!</li>
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<li>Replace “East Asia” with “Eastern Asia” region on CGSpace (UN M.49 region)</li>
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</ul>
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<a href='https://alanorth.github.io/cgspace-notes/2022-12/'>Read more →</a>
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</article>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2022-11/">November, 2022</a></h2>
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<p class="blog-post-meta"><time datetime="2022-11-01T09:11:36+03:00">Tue Nov 01, 2022</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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<h2 id="2022-11-01">2022-11-01</h2>
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<ul>
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<li>Last night I re-synced DSpace 7 Test from CGSpace
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<ul>
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<li>I also updated all my local <code>7_x-dev</code> branches on the latest upstreams</li>
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</ul>
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</li>
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<li>I spent some time updating the authorizations in Alliance collections
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<ul>
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<li>I want to make sure they use groups instead of individuals where possible!</li>
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</ul>
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</li>
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<li>I reverted the Cocoon autosave change because it was more of a nuissance that Peter can’t upload CSVs from the web interface and is a very low severity security issue</li>
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</ul>
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<a href='https://alanorth.github.io/cgspace-notes/2022-11/'>Read more →</a>
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</article>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2022-10/">October, 2022</a></h2>
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<p class="blog-post-meta"><time datetime="2022-10-01T19:45:36+03:00">Sat Oct 01, 2022</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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<h2 id="2022-10-01">2022-10-01</h2>
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<ul>
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<li>Start a harvest on AReS last night</li>
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<li>Yesterday I realized how to use <a href="https://im4java.sourceforge.net/docs/dev-guide.html">GraphicsMagick with im4java</a> and I want to re-visit some of my thumbnail tests
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<ul>
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<li>I’m also interested in libvips support via jVips, though last time I checked it was only for Java 8</li>
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<li>I filed <a href="https://github.com/criteo/JVips/issues/141">an issue to ask about Java 11+ support</a></li>
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</ul>
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</li>
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</ul>
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<a href='https://alanorth.github.io/cgspace-notes/2022-10/'>Read more →</a>
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2023-07/">July, 2023</a></li>
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<li><a href="/cgspace-notes/2023-06/">June, 2023</a></li>
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<li><a href="/cgspace-notes/2023-05/">May, 2023</a></li>
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<li><a href="/cgspace-notes/2023-04/">April, 2023</a></li>
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<li><a href="/cgspace-notes/2023-03/">March, 2023</a></li>
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<h4>Links</h4>
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<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
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<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
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<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
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Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
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