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258 lines
8.5 KiB
HTML
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<meta property="og:title" content="March, 2023" />
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<meta property="og:description" content="2023-03-01
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Remove cg.subject.wle and cg.identifier.wletheme from CGSpace input form after confirming with IWMI colleagues that they no longer need them (WLE closed in 2021)
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iso-codes 4.13.0 was released, which incorporates my changes to the common names for Iran, Laos, and Syria
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I finally got through with porting the input form from DSpace 6 to DSpace 7
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" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2023-03/" />
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<meta property="article:published_time" content="2023-03-01T07:58:36+03:00" />
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<meta property="article:modified_time" content="2023-03-07T09:53:31+03:00" />
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<meta name="twitter:card" content="summary"/>
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<meta name="twitter:title" content="March, 2023"/>
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<meta name="twitter:description" content="2023-03-01
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Remove cg.subject.wle and cg.identifier.wletheme from CGSpace input form after confirming with IWMI colleagues that they no longer need them (WLE closed in 2021)
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iso-codes 4.13.0 was released, which incorporates my changes to the common names for Iran, Laos, and Syria
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I finally got through with porting the input form from DSpace 6 to DSpace 7
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"/>
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<meta name="generator" content="Hugo 0.110.0">
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<title>March, 2023 | CGSpace Notes</title>
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<h1 class="blog-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
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<p class="lead blog-description" dir="auto">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
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<article class="blog-post">
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<header>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2023-03/">March, 2023</a></h2>
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<p class="blog-post-meta">
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<time datetime="2023-03-01T07:58:36+03:00">Wed Mar 01, 2023</time>
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in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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<h2 id="2023-03-01">2023-03-01</h2>
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<ul>
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<li>Remove <code>cg.subject.wle</code> and <code>cg.identifier.wletheme</code> from CGSpace input form after confirming with IWMI colleagues that they no longer need them (WLE closed in 2021)</li>
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<li><a href="https://salsa.debian.org/iso-codes-team/iso-codes/-/blob/main/CHANGELOG.md#4130-2023-02-28">iso-codes 4.13.0 was released</a>, which incorporates my changes to the common names for Iran, Laos, and Syria</li>
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<li>I finally got through with porting the input form from DSpace 6 to DSpace 7</li>
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</ul>
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<ul>
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<li>I can’t put my finger on it, but the input form has to be formatted very particularly, for example if your rows have more than two fields in them with out a sufficient Bootstrap grid style, or if you use a <code>twobox</code>, etc, the entire form step appears blank</li>
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</ul>
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<h2 id="2023-03-02">2023-03-02</h2>
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<ul>
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<li>I did some experiments with the new <a href="https://datapythonista.me/blog/pandas-20-and-the-arrow-revolution-part-i">Pandas 2.0.0rc0 Apache Arrow support</a>
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<ul>
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<li>There is a change to the way nulls are handled and it causes my tests for <code>pd.isna(field)</code> to fail</li>
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<li>I think we need consider blanks as null, but I’m not sure</li>
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</ul>
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</li>
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<li>I made some adjustments to the Discovery sidebar facets on DSpace 6 while I was looking at the DSpace 7 configuration
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<ul>
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<li>I downgraded CIFOR subject, Humidtropics subject, Drylands subject, ICARDA subject, and Language from DiscoverySearchFilterFacet to DiscoverySearchFilter in <code>discovery.xml</code> since we are no longer using them in sidebar facets</li>
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</ul>
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</li>
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</ul>
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<h2 id="2023-03-03">2023-03-03</h2>
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<ul>
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<li>Atmire merged one of my old pull requests into COUNTER-Robots:
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<ul>
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<li><a href="https://github.com/atmire/COUNTER-Robots/pull/54">COUNTER_Robots_list.json: Add new bots</a></li>
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</ul>
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</li>
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<li>I will update the local ILRI overrides in our DSpace spider agents file</li>
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</ul>
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<h2 id="2023-03-04">2023-03-04</h2>
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<ul>
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<li>Submit a <a href="https://github.com/flyingcircusio/pycountry/pull/156">pull request on pycountry to use iso-codes 4.13.0</a></li>
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</ul>
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<h2 id="2023-03-05">2023-03-05</h2>
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<ul>
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<li>Start a harvest on AReS</li>
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</ul>
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<h2 id="2023-03-06">2023-03-06</h2>
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<ul>
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<li>Export CGSpace to do Initiative collection mappings
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<ul>
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<li>There were thirty-three that needed updating</li>
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</ul>
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</li>
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<li>Send Abenet and Sam a list of twenty-one CAS publications that had been marked as “multiple documents” that we uploaded as metadata-only items
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<ul>
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<li>Goshu will download the PDFs for each and upload them to the items on CGSpace manually</li>
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</ul>
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</li>
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<li>I spent some time trying to get csv-metadata-quality working with the new Arrow backend for Pandas 2.0.0rc0
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<ul>
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<li>It seems there is a problem recognizing empty strings as na with <code>pd.isna()</code></li>
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<li>If I do <code>pd.isna(field) or field == ""</code> then it works as expected, but that feels hacky</li>
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<li>I’m going to test again on the next release…</li>
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<li>Note that I had been setting both of these global options:</li>
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</ul>
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</li>
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</ul>
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<pre tabindex="0"><code>pd.options.mode.dtype_backend = 'pyarrow'
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pd.options.mode.nullable_dtypes = True
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</code></pre><ul>
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<li>Then reading the CSV like this:</li>
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</ul>
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<pre tabindex="0"><code>df = pd.read_csv(args.input_file, engine='pyarrow', dtype='string[pyarrow]'
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</code></pre><h2 id="2023-03-07">2023-03-07</h2>
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<!-- raw HTML omitted -->
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</article>
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</div> <!-- /.blog-main -->
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<aside class="col-sm-3 ml-auto blog-sidebar">
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<section class="sidebar-module">
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<h4>Recent Posts</h4>
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2023-03/">March, 2023</a></li>
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<li><a href="/cgspace-notes/2023-02/">February, 2023</a></li>
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<li><a href="/cgspace-notes/2023-01/">January, 2023</a></li>
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<li><a href="/cgspace-notes/2022-12/">December, 2022</a></li>
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<li><a href="/cgspace-notes/2022-11/">November, 2022</a></li>
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</ol>
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</section>
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<section class="sidebar-module">
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<h4>Links</h4>
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<ol class="list-unstyled">
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<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
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<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
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<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
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</ol>
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</section>
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</aside>
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</div> <!-- /.row -->
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Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
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