--- title: "April, 2018" date: 2018-04-01T16:13:54+02:00 author: "Alan Orth" tags: ["Notes"] --- ## 2018-04-01 - I tried to test something on DSpace Test but noticed that it's down since god knows when - Catalina logs at least show some memory errors yesterday: ``` Mar 31, 2018 10:26:42 PM org.apache.catalina.core.ContainerBase$ContainerBackgroundProcessor run SEVERE: Unexpected death of background thread ContainerBackgroundProcessor[StandardEngine[Catalina]] java.lang.OutOfMemoryError: Java heap space Exception in thread "ContainerBackgroundProcessor[StandardEngine[Catalina]]" java.lang.OutOfMemoryError: Java heap space ``` - So this is getting super annoying - I ran all system updates on DSpace Test and rebooted it - For some reason Listings and Reports is not giving any results for any queries now... - I posted a message on Yammer to ask if people are using the Duplicate Check step from the Metadata Quality Module - Help Lili Szilagyi with a question about statistics on some CCAFS items ## 2018-04-04 - Peter noticed that there were still some old CRP names on CGSpace, because I hadn't forced the Discovery index to be updated after I fixed the others last week - For completeness I re-ran the CRP corrections on CGSpace: ``` $ ./fix-metadata-values.py -i /tmp/Correct-21-CRPs-2018-03-16.csv -f cg.contributor.crp -t correct -m 230 -db dspace -u dspace -p 'fuuu' Fixed 1 occurences of: AGRICULTURE FOR NUTRITION AND HEALTH ``` - Then started a full Discovery index: ``` $ export JAVA_OPTS='-Dfile.encoding=UTF-8 -Xmx1024m' $ time schedtool -D -e ionice -c2 -n7 nice -n19 dspace index-discovery -b ``` - Elizabeth from CIAT emailed to ask if I could help her by adding ORCID identifiers to all of Joseph Tohme's items - I used my [add-orcid-identifiers-csv.py](https://gist.githubusercontent.com/alanorth/a49d85cd9c5dea89cddbe809813a7050/raw/f67b6e45a9a940732882ae4bb26897a9b245ef31/add-orcid-identifiers-csv.py) script: ``` $ ./add-orcid-identifiers-csv.py -i /tmp/jtohme-2018-04-04.csv -db dspace -u dspace -p 'fuuu' ``` - The CSV format of `jtohme-2018-04-04.csv` was: ```csv dc.contributor.author,cg.creator.id "Tohme, Joseph M.",Joe Tohme: 0000-0003-2765-7101 ```