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<meta name="twitter:description" content="2021-06-01 IWMI notified me that AReS was down with an HTTP 502 error Looking at UptimeRobot I see it has been down for 33 hours, but I never got a notification I don’t see anything in the Elasticsearch container logs, or the systemd journal on the host, but I notice that the angular_nginx container isn’t running I simply started it and AReS was running again: "/> <meta name="generator" content="Hugo 0.83.1" /> <script type="application/ld+json"> { "@context": "http://schema.org", "@type": "BlogPosting", "headline": "June, 2021", "url": "https://alanorth.github.io/cgspace-notes/2021-06/", "wordCount": "415", "datePublished": "2021-06-01T10:51:07+03:00", "dateModified": "2021-06-10T21:41:44+03:00", "author": { "@type": "Person", "name": "Alan Orth" }, "keywords": "Notes" } </script> <link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2021-06/"> <title>June, 2021 | CGSpace Notes</title> <!-- combined, minified CSS --> <link 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href="https://cgspace.cgiar.org">CGSpace</a> repository.</p> </div> </header> <div class="container"> <div class="row"> <div class="col-sm-8 blog-main"> <article class="blog-post"> <header> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2021-06/">June, 2021</a></h2> <p class="blog-post-meta"> <time datetime="2021-06-01T10:51:07+03:00">Tue Jun 01, 2021</time> in <span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a> </p> </header> <h2 id="2021-06-01">2021-06-01</h2> <ul> <li>IWMI notified me that AReS was down with an HTTP 502 error <ul> <li>Looking at UptimeRobot I see it has been down for 33 hours, but I never got a notification</li> <li>I don’t see anything in the Elasticsearch container logs, or the systemd journal on the host, but I notice that the <code>angular_nginx</code> container isn’t running</li> <li>I simply started it and AReS was running again:</li> </ul> </li> </ul> <pre><code class="language-console" data-lang="console">$ docker-compose -f docker/docker-compose.yml start angular_nginx </code></pre><ul> <li>Margarita from CCAFS emailed me to say that workflow alerts haven’t been working lately <ul> <li>I guess this is related to the SMTP issues last week</li> <li>I had fixed the config, but didn’t restart Tomcat so DSpace didn’t load the new variables</li> <li>I ran all system updates on CGSpace (linode18) and DSpace Test (linode26) and rebooted the servers</li> </ul> </li> </ul> <h2 id="2021-06-03">2021-06-03</h2> <ul> <li>Meeting with AMCOW and IWMI to discuss AMCOW getting IWMI’s content into the new AMCOW Knowledge Hub <ul> <li>At first we spent some time talking about DSpace communities/collections and the REST API, but then they said they actually prefer to send queries to sites on the fly and cache them in Redis for some time</li> <li>That’s when I thought they could perhaps use the OpenSearch, but I can’t remember if it’s possible to limit by community, or only collection…</li> <li>Looking now, I see there is a “scope” parameter that can be used for community or collection, for example:</li> </ul> </li> </ul> <pre><code>https://cgspace.cgiar.org/open-search/discover?query=subject:water%20scarcity&scope=10568/16814&order=DESC&rpp=100&sort_by=2&start=1 </code></pre><ul> <li>That will sort by date issued (see: <code>webui.itemlist.sort-option.2</code> in dspace.cfg), give 100 results per page, and start on item 1</li> <li>Otherwise, another alternative would be to use the IWMI CSV that we are already exporting every week</li> <li>Fill out the <em>CGIAR-AGROVOC Task Group: Survey on the current CGIAR use of AGROVOC</em> survey on behalf of CGSpace</li> </ul> <h2 id="2021-06-06">2021-06-06</h2> <ul> <li>The Elasticsearch indexes are messed up so I dumped and re-created them correctly:</li> </ul> <pre><code class="language-console" data-lang="console">curl -XDELETE 'http://localhost:9200/openrxv-items-final' curl -XDELETE 'http://localhost:9200/openrxv-items-temp' curl -XPUT 'http://localhost:9200/openrxv-items-final' curl -XPUT 'http://localhost:9200/openrxv-items-temp' curl -s -X POST 'http://localhost:9200/_aliases' -H 'Content-Type: application/json' -d'{"actions" : [{"add" : { "index" : "openrxv-items-final", "alias" : "openrxv-items"}}]}' elasticdump --input=/home/aorth/openrxv-items_mapping.json --output=http://localhost:9200/openrxv-items-final --type=mapping elasticdump --input=/home/aorth/openrxv-items_data.json --output=http://localhost:9200/openrxv-items-final --type=data --limit=1000 </code></pre><ul> <li>Then I started a harvesting on AReS</li> </ul> <h2 id="2021-06-07">2021-06-07</h2> <ul> <li>The harvesting on AReS completed successfully</li> <li>Provide feedback to FAO on how we use AGROVOC for their “AGROVOC call for use cases”</li> </ul> <h2 id="2021-06-10">2021-06-10</h2> <ul> <li>Skype with Moayad to discuss AReS harvesting improvements <ul> <li>He will work on a plugin that reads the XML sitemap to get all item IDs and checks whether we have them or not</li> </ul> </li> </ul> <h2 id="2021-06-14">2021-06-14</h2> <ul> <li>Dump and re-create indexes on AReS (as above) so I can do a harvest</li> </ul> <!-- raw HTML omitted --> </article> </div> <!-- /.blog-main --> <aside class="col-sm-3 ml-auto blog-sidebar"> <section class="sidebar-module"> <h4>Recent Posts</h4> <ol class="list-unstyled"> <li><a href="/cgspace-notes/2021-06/">June, 2021</a></li> <li><a href="/cgspace-notes/2021-05/">May, 2021</a></li> <li><a href="/cgspace-notes/2021-04/">April, 2021</a></li> <li><a href="/cgspace-notes/2021-03/">March, 2021</a></li> <li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li> </ol> </section> <section class="sidebar-module"> <h4>Links</h4> <ol class="list-unstyled"> <li><a href="https://cgspace.cgiar.org">CGSpace</a></li> <li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li> <li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li> </ol> </section> </aside> </div> <!-- /.row --> </div> <!-- /.container --> <footer class="blog-footer"> <p dir="auto"> Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>. </p> <p> <a href="#">Back to top</a> </p> </footer> </body> </html>