--- title: "December, 2023" date: 2023-12-01T08:48:36+03:00 author: "Alan Orth" categories: ["Notes"] --- ## 2023-12-01 - There is still high load on CGSpace and I don't know why - I don't see a high number of sessions compared to previous days in the last few weeks ```console $ for file in dspace.log.2023-11-[23]*; do echo "$file"; grep -a -oE 'session_id=[A-Z0-9]{32}' "$file" | sort | uniq | wc -l; done dspace.log.2023-11-20 22865 dspace.log.2023-11-21 20296 dspace.log.2023-11-22 19688 dspace.log.2023-11-23 17906 dspace.log.2023-11-24 18453 dspace.log.2023-11-25 17513 dspace.log.2023-11-26 19037 dspace.log.2023-11-27 21103 dspace.log.2023-11-28 23023 dspace.log.2023-11-29 23545 dspace.log.2023-11-30 21298 ``` - Even the number of unique IPs is not very high compared to the last week or so: ```console # awk '{print $1}' /var/log/nginx/{access,library-access,oai,rest}.log.1 | sort | uniq | wc -l 17023 # awk '{print $1}' /var/log/nginx/{access,library-access,oai,rest}.log.2.gz | sort | uniq | wc -l 17294 # awk '{print $1}' /var/log/nginx/{access,library-access,oai,rest}.log.3.gz | sort | uniq | wc -l 22057 # awk '{print $1}' /var/log/nginx/{access,library-access,oai,rest}.log.4.gz | sort | uniq | wc -l 32956 # awk '{print $1}' /var/log/nginx/{access,library-access,oai,rest}.log.5.gz | sort | uniq | wc -l 11415 # awk '{print $1}' /var/log/nginx/{access,library-access,oai,rest}.log.6.gz | sort | uniq | wc -l 15444 # awk '{print $1}' /var/log/nginx/{access,library-access,oai,rest}.log.7.gz | sort | uniq | wc -l 12648 ``` - It doesn't make any sense so I think I'm going to restart the server... - After restarting the server the load went down to normal levels... who knows... - I started trying to see how I'm going to generate the fake statistics for the Alliance bitstream that was replaced - I exported all the statistics for the owningItem now: ```console $ chrt -b 0 ./run.sh -s http://localhost:8081/solr/statistics -a export -o /tmp/stats-export.json -f 'owningItem:b5862bfa-9799-4167-b1cf-76f0f4ea1e18' -k uid ``` - Importing them into DSpace Test didn't show the statistics in the Atmire module, but I see them in Solr... ## 2023-12-02 - Export CGSpace to check for missing Initiative collection mappings - Start a harvest on AReS ## 2023-12-04 - Send a message to Altmetric support because the item IWMI highlighted last month still doesn't show the attention score for the Handle after I tweeted it several times weeks ago - Spent some time writing a Python script to fix the literal MaxMind City JSON objects in our Solr statistics - There are about 1.6 million of these, so I exported them using solr-import-export-json with the query `city:com*` but ended up finding many that have missing bundles, container bitstreams, etc: ``` city:com* AND -bundleName:[* TO *] AND -containerBitstream:[* TO *] AND -file_id:[* TO *] AND -owningItem:[* TO *] AND -version_id:[* TO *] ``` - (Note the negation to find fields that are missing) - I don't know what I want to do with these yet ## 2023-12-05 - I finished the `fix_maxmind_stats.py` script and fixed 1.6 million records and imported them on CGSpace after testing on DSpace 7 Test - Altmetric said there was a glitch regarding the Handle and DOI linking and they successfully re-scraped the item page and linked them - They sent me a list of current production IPs and I notice that some of them are in our nginx bot network list: ```console $ for network in $(csvcut -c network /tmp/ips.csv | sed 1d | sort -u); do grepcidr $network ~/src/git/rmg-ansible-public/roles/dspace/files/nginx/bot-networks.conf; done 108.128.0.0/13 'bot'; 46.137.0.0/16 'bot'; 52.208.0.0/13 'bot'; 52.48.0.0/13 'bot'; 54.194.0.0/15 'bot'; 54.216.0.0/14 'bot'; 54.220.0.0/15 'bot'; 54.228.0.0/15 'bot'; 63.32.242.35/32 'bot'; 63.32.0.0/14 'bot'; 99.80.0.0/15 'bot' ``` - I will remove those for now so that Altmetric doesn't have any unexpected issues harvesting ## 2023-12-08 - Finalized the script to generate Solr statistics for Alliance research Mirjam - The script is `ilri/generate_solr_statistics.py` - I generated ~3,200 statistics based on her records of the download statistics of [that item](https://hdl.handle.net/10568/131997) and imported them on CGSpace - Did some work on the DSpace 7 submission form - Peter asked for lists of affiliations, investors, and publishers to do some cleanups - I generated a list from a CSV export instead of doing it based on a SQL dump... ```console $ csvcut -c 'cg.contributor.affiliation[en_US]' /tmp/initiatives.csv \ | sed -e 1d -e 's/^"//' -e 's/"$//' -e 's/||/\n/g' -e '/^$/d' \ | sort | uniq -c | sort -hr \ | awk 'BEGIN { FS = "^[[:space:]]+[[:digit:]]+[[:space:]]+" } {print $2}'\ | sed -e '1i cg.contributor.affiliation' -e 's/^\(.*\)$/"\1"/' \ > /tmp/2023-12-08-initiatives-affiliations.csv ``` - Export a list of authors as well: ```console localhost/dspace7= ☘ \COPY (SELECT DISTINCT text_value AS "dc.contributor.author", count(*) FROM metadatavalue WHERE dspace_object_id in (SELECT dspace_object_id FROM item) AND metadata_field_id = 3 GROUP BY "dc.contributor.author" ORDER BY count DESC) to /tmp/2023-12-08-authors.csv WITH CSV HEADER; COPY 102435 ``` ## 2023-12-11 - Work on OpenRXV dependencies and podman a bit - Peter noticed that the statistics for this month are very very low on CGSpace - I don't know what is going on, perhaps it is related to me adjusting the nginx config last week? - Ah, it's probably because of the spider patterns I updated on 2023-11 ## 2023-12-16 - Export CGSpace to check for missing Initiative collection mappings - Start a harvest on AReS ## 2023-12-17 - Pull latest master branch for OpenRXV and deploy on the server - I threw away some changes in the tree regarding the Angular base ref, and it broke AReS - So note to self: we need to set the base ref in `frontend/Dockerfile` before building! - Now Salem fixed the country map ## 2023-12-18 - Work a bit on the IFPRI-ISNAR archive from Leigh - More work on the DSpace 7 home page