--- title: "October, 2022" date: 2022-10-01T19:45:36+03:00 author: "Alan Orth" categories: ["Notes"] --- ## 2022-10-01 - Start a harvest on AReS last night - Yesterday I realized how to use [GraphicsMagick with im4java](https://im4java.sourceforge.net/docs/dev-guide.html) and I want to re-visit some of my thumbnail tests - I'm also interested in libvips support via jVips, though last time I checked it was only for Java 8 - I filed [an issue to ask about Java 11+ support](https://github.com/criteo/JVips/issues/141) ## 2022-10-03 - Make two pull requests for DSpace 7.x - [Update PDFBox dependency to version 2.0.27](https://github.com/DSpace/DSpace/pull/8503) - [Update Apache commons-dbcp2 and commons-pool2 dependencies](https://github.com/DSpace/DSpace/pull/8504) - Udana had asked me about their RSS feed and it not showing the latest publications in his email inbox - He is using this feed from FeedBurner: https://feeds.feedburner.com/iwmi-cgspace - I don't have access to the FeedBurner configuration, but I looked at the [raw feed](https://gist.github.com/alanorth/0c518fc571f450f8cc353c42cbdd277c) and see it's just getting all the items in the IWMI community - This OpenSearch query should do the same: `https://cgspace.cgiar.org/open-search/discover?scope=10568/16814&query=*&sort_by=3&order=DESC` - The `sort_by=3` corresponds to `webui.itemlist.sort-option.3 = dateaccessioned:dc.date.accessioned:date` in dspace.cfg - Peter sent me a CSV file a few days ago that he was unable to upload to CGSpace - The stacktrace from the error he was getting was: ```console Java stacktrace: java.lang.ClassCastException: org.apache.cocoon.servlet.multipart.PartInMemory cannot be cast to org.dspace.app.xmlui.cocoon.servlet.multipart.DSpacePartOnDisk at org.dspace.app.xmlui.aspect.administrative.FlowMetadataImportUtils.processUploadCSV(FlowMetadataImportUtils.java:116) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.mozilla.javascript.MemberBox.invoke(MemberBox.java:155) at org.mozilla.javascript.NativeJavaMethod.call(NativeJavaMethod.java:243) at org.mozilla.javascript.Interpreter.interpretLoop(Interpreter.java:3237) at org.mozilla.javascript.Interpreter.interpret(Interpreter.java:2394) at org.mozilla.javascript.InterpretedFunction.call(InterpretedFunction.java:162) at org.mozilla.javascript.ContextFactory.doTopCall(ContextFactory.java:393) at org.mozilla.javascript.ScriptRuntime.doTopCall(ScriptRuntime.java:2834) at org.mozilla.javascript.InterpretedFunction.call(InterpretedFunction.java:160) at org.mozilla.javascript.Context.call(Context.java:538) at org.mozilla.javascript.ScriptableObject.callMethod(ScriptableObject.java:1833) at org.mozilla.javascript.ScriptableObject.callMethod(ScriptableObject.java:1803) at org.apache.cocoon.components.flow.javascript.fom.FOM_JavaScriptInterpreter.handleContinuation(FOM_JavaScriptInterpreter.java:698) at org.apache.cocoon.components.treeprocessor.sitemap.CallFunctionNode.invoke(CallFunctionNode.java:94) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:55) at org.apache.cocoon.components.treeprocessor.sitemap.MatchNode.invoke(MatchNode.java:87) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:55) at org.apache.cocoon.components.treeprocessor.sitemap.MatchNode.invoke(MatchNode.java:87) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.SelectNode.invoke(SelectNode.java:82) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelineNode.invoke(PipelineNode.java:143) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelinesNode.invoke(PipelinesNode.java:81) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process(ConcreteTreeProcessor.java:239) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.buildPipeline(ConcreteTreeProcessor.java:186) at org.apache.cocoon.components.treeprocessor.TreeProcessor.buildPipeline(TreeProcessor.java:260) at org.apache.cocoon.components.treeprocessor.sitemap.MountNode.invoke(MountNode.java:107) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.SelectNode.invoke(SelectNode.java:87) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:55) at org.apache.cocoon.components.treeprocessor.sitemap.MatchNode.invoke(MatchNode.java:87) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelineNode.invoke(PipelineNode.java:143) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelinesNode.invoke(PipelinesNode.java:81) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process(ConcreteTreeProcessor.java:239) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.buildPipeline(ConcreteTreeProcessor.java:186) at org.apache.cocoon.components.treeprocessor.TreeProcessor.buildPipeline(TreeProcessor.java:260) at org.apache.cocoon.components.treeprocessor.sitemap.MountNode.invoke(MountNode.java:107) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:55) at org.apache.cocoon.components.treeprocessor.sitemap.MatchNode.invoke(MatchNode.java:87) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelineNode.invoke(PipelineNode.java:143) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelinesNode.invoke(PipelinesNode.java:81) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process(ConcreteTreeProcessor.java:239) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.buildPipeline(ConcreteTreeProcessor.java:186) at org.apache.cocoon.components.treeprocessor.TreeProcessor.buildPipeline(TreeProcessor.java:260) at org.apache.cocoon.components.source.impl.SitemapSource.init(SitemapSource.java:277) at org.apache.cocoon.components.source.impl.SitemapSource.(SitemapSource.java:148) at org.apache.cocoon.components.source.impl.SitemapSourceFactory.getSource(SitemapSourceFactory.java:62) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:153) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:183) at org.apache.cocoon.generation.FileGenerator.setup(FileGenerator.java:99) at org.dspace.app.xmlui.cocoon.AspectGenerator.setup(AspectGenerator.java:81) at sun.reflect.GeneratedMethodAccessor255.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy190.setup(Unknown Source) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.setupPipeline(AbstractProcessingPipeline.java:343) at org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipeline.setupPipeline(AbstractCachingProcessingPipeline.java:710) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.preparePipeline(AbstractProcessingPipeline.java:466) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.prepareInternal(AbstractProcessingPipeline.java:480) at sun.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy189.prepareInternal(Unknown Source) at org.apache.cocoon.components.source.impl.SitemapSource.init(SitemapSource.java:292) at org.apache.cocoon.components.source.impl.SitemapSource.(SitemapSource.java:148) at org.apache.cocoon.components.source.impl.SitemapSourceFactory.getSource(SitemapSourceFactory.java:62) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:153) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:183) at org.apache.cocoon.generation.FileGenerator.setup(FileGenerator.java:99) at org.dspace.app.xmlui.cocoon.AspectGenerator.setup(AspectGenerator.java:81) at sun.reflect.GeneratedMethodAccessor255.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy190.setup(Unknown Source) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.setupPipeline(AbstractProcessingPipeline.java:343) at org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipeline.setupPipeline(AbstractCachingProcessingPipeline.java:710) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.preparePipeline(AbstractProcessingPipeline.java:466) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.prepareInternal(AbstractProcessingPipeline.java:480) at sun.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy189.prepareInternal(Unknown Source) at org.apache.cocoon.components.source.impl.SitemapSource.init(SitemapSource.java:292) at org.apache.cocoon.components.source.impl.SitemapSource.(SitemapSource.java:148) at org.apache.cocoon.components.source.impl.SitemapSourceFactory.getSource(SitemapSourceFactory.java:62) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:153) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:183) at org.apache.cocoon.generation.FileGenerator.setup(FileGenerator.java:99) at org.dspace.app.xmlui.cocoon.AspectGenerator.setup(AspectGenerator.java:81) at sun.reflect.GeneratedMethodAccessor255.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy190.setup(Unknown Source) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.setupPipeline(AbstractProcessingPipeline.java:343) at org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipeline.setupPipeline(AbstractCachingProcessingPipeline.java:710) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.preparePipeline(AbstractProcessingPipeline.java:466) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.prepareInternal(AbstractProcessingPipeline.java:480) at sun.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy189.prepareInternal(Unknown Source) at org.apache.cocoon.components.source.impl.SitemapSource.init(SitemapSource.java:292) at org.apache.cocoon.components.source.impl.SitemapSource.(SitemapSource.java:148) at org.apache.cocoon.components.source.impl.SitemapSourceFactory.getSource(SitemapSourceFactory.java:62) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:153) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:183) at org.apache.cocoon.generation.FileGenerator.setup(FileGenerator.java:99) at org.dspace.app.xmlui.cocoon.AspectGenerator.setup(AspectGenerator.java:81) at sun.reflect.GeneratedMethodAccessor255.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy190.setup(Unknown Source) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.setupPipeline(AbstractProcessingPipeline.java:343) at org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipeline.setupPipeline(AbstractCachingProcessingPipeline.java:710) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.preparePipeline(AbstractProcessingPipeline.java:466) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.prepareInternal(AbstractProcessingPipeline.java:480) at sun.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy189.prepareInternal(Unknown Source) at org.apache.cocoon.components.source.impl.SitemapSource.init(SitemapSource.java:292) at org.apache.cocoon.components.source.impl.SitemapSource.(SitemapSource.java:148) at org.apache.cocoon.components.source.impl.SitemapSourceFactory.getSource(SitemapSourceFactory.java:62) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:153) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:183) at org.apache.cocoon.generation.FileGenerator.setup(FileGenerator.java:99) at org.dspace.app.xmlui.cocoon.AspectGenerator.setup(AspectGenerator.java:81) at sun.reflect.GeneratedMethodAccessor255.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy190.setup(Unknown Source) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.setupPipeline(AbstractProcessingPipeline.java:343) at org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipeline.setupPipeline(AbstractCachingProcessingPipeline.java:710) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.preparePipeline(AbstractProcessingPipeline.java:466) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.prepareInternal(AbstractProcessingPipeline.java:480) at sun.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy189.prepareInternal(Unknown Source) at org.apache.cocoon.components.source.impl.SitemapSource.init(SitemapSource.java:292) at org.apache.cocoon.components.source.impl.SitemapSource.(SitemapSource.java:148) at org.apache.cocoon.components.source.impl.SitemapSourceFactory.getSource(SitemapSourceFactory.java:62) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:153) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:183) at org.apache.cocoon.generation.FileGenerator.setup(FileGenerator.java:99) at org.dspace.app.xmlui.cocoon.AspectGenerator.setup(AspectGenerator.java:81) at sun.reflect.GeneratedMethodAccessor255.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy190.setup(Unknown Source) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.setupPipeline(AbstractProcessingPipeline.java:343) at org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipeline.setupPipeline(AbstractCachingProcessingPipeline.java:710) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.preparePipeline(AbstractProcessingPipeline.java:466) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.prepareInternal(AbstractProcessingPipeline.java:480) at sun.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy189.prepareInternal(Unknown Source) at org.apache.cocoon.components.source.impl.SitemapSource.init(SitemapSource.java:292) at org.apache.cocoon.components.source.impl.SitemapSource.(SitemapSource.java:148) at org.apache.cocoon.components.source.impl.SitemapSourceFactory.getSource(SitemapSourceFactory.java:62) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:153) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:183) at org.apache.cocoon.generation.FileGenerator.setup(FileGenerator.java:99) at org.dspace.app.xmlui.cocoon.AspectGenerator.setup(AspectGenerator.java:81) at sun.reflect.GeneratedMethodAccessor255.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy190.setup(Unknown Source) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.setupPipeline(AbstractProcessingPipeline.java:343) at org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipeline.setupPipeline(AbstractCachingProcessingPipeline.java:710) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.preparePipeline(AbstractProcessingPipeline.java:466) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.prepareInternal(AbstractProcessingPipeline.java:480) at sun.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy189.prepareInternal(Unknown Source) at org.apache.cocoon.components.source.impl.SitemapSource.init(SitemapSource.java:292) at org.apache.cocoon.components.source.impl.SitemapSource.(SitemapSource.java:148) at org.apache.cocoon.components.source.impl.SitemapSourceFactory.getSource(SitemapSourceFactory.java:62) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:153) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:183) at org.apache.cocoon.generation.FileGenerator.setup(FileGenerator.java:99) at org.dspace.app.xmlui.cocoon.AspectGenerator.setup(AspectGenerator.java:81) at sun.reflect.GeneratedMethodAccessor255.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy190.setup(Unknown Source) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.setupPipeline(AbstractProcessingPipeline.java:343) at org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipeline.setupPipeline(AbstractCachingProcessingPipeline.java:710) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.preparePipeline(AbstractProcessingPipeline.java:466) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.prepareInternal(AbstractProcessingPipeline.java:480) at sun.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy189.prepareInternal(Unknown Source) at org.apache.cocoon.components.source.impl.SitemapSource.init(SitemapSource.java:292) at org.apache.cocoon.components.source.impl.SitemapSource.(SitemapSource.java:148) at org.apache.cocoon.components.source.impl.SitemapSourceFactory.getSource(SitemapSourceFactory.java:62) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:153) at org.apache.cocoon.components.source.CocoonSourceResolver.resolveURI(CocoonSourceResolver.java:183) at org.apache.cocoon.generation.FileGenerator.setup(FileGenerator.java:99) at sun.reflect.GeneratedMethodAccessor255.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy190.setup(Unknown Source) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.setupPipeline(AbstractProcessingPipeline.java:343) at org.apache.cocoon.components.pipeline.impl.AbstractCachingProcessingPipeline.setupPipeline(AbstractCachingProcessingPipeline.java:710) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.preparePipeline(AbstractProcessingPipeline.java:466) at org.apache.cocoon.components.pipeline.AbstractProcessingPipeline.process(AbstractProcessingPipeline.java:411) at sun.reflect.GeneratedMethodAccessor331.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.cocoon.core.container.spring.avalon.PoolableProxyHandler.invoke(PoolableProxyHandler.java:71) at com.sun.proxy.$Proxy189.process(Unknown Source) at org.apache.cocoon.components.treeprocessor.sitemap.SerializeNode.invoke(SerializeNode.java:147) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:55) at org.apache.cocoon.components.treeprocessor.sitemap.MatchNode.invoke(MatchNode.java:87) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelineNode.invoke(PipelineNode.java:143) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelinesNode.invoke(PipelinesNode.java:81) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process(ConcreteTreeProcessor.java:239) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process(ConcreteTreeProcessor.java:171) at org.apache.cocoon.components.treeprocessor.TreeProcessor.process(TreeProcessor.java:247) at org.apache.cocoon.components.treeprocessor.sitemap.MountNode.invoke(MountNode.java:117) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:55) at org.apache.cocoon.components.treeprocessor.sitemap.MatchNode.invoke(MatchNode.java:87) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelineNode.invoke(PipelineNode.java:143) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelinesNode.invoke(PipelinesNode.java:81) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process(ConcreteTreeProcessor.java:239) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process(ConcreteTreeProcessor.java:171) at org.apache.cocoon.components.treeprocessor.TreeProcessor.process(TreeProcessor.java:247) at org.apache.cocoon.components.treeprocessor.sitemap.MountNode.invoke(MountNode.java:117) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelineNode.invoke(PipelineNode.java:143) at org.apache.cocoon.components.treeprocessor.AbstractParentProcessingNode.invokeNodes(AbstractParentProcessingNode.java:78) at org.apache.cocoon.components.treeprocessor.sitemap.PipelinesNode.invoke(PipelinesNode.java:81) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process(ConcreteTreeProcessor.java:239) at org.apache.cocoon.components.treeprocessor.ConcreteTreeProcessor.process(ConcreteTreeProcessor.java:171) at org.apache.cocoon.components.treeprocessor.TreeProcessor.process(TreeProcessor.java:247) at org.apache.cocoon.servlet.RequestProcessor.process(RequestProcessor.java:351) at org.apache.cocoon.servlet.RequestProcessor.service(RequestProcessor.java:169) at org.apache.cocoon.sitemap.SitemapServlet.service(SitemapServlet.java:84) at javax.servlet.http.HttpServlet.service(HttpServlet.java:728) at org.apache.cocoon.servletservice.ServletServiceContext$PathDispatcher.forward(ServletServiceContext.java:468) at org.apache.cocoon.servletservice.ServletServiceContext$PathDispatcher.forward(ServletServiceContext.java:443) at org.apache.cocoon.servletservice.spring.ServletFactoryBean$ServiceInterceptor.invoke(ServletFactoryBean.java:264) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:204) at com.sun.proxy.$Proxy186.service(Unknown Source) at org.dspace.springmvc.CocoonView.render(CocoonView.java:113) at org.springframework.web.servlet.DispatcherServlet.render(DispatcherServlet.java:1216) at org.springframework.web.servlet.DispatcherServlet.processDispatchResult(DispatcherServlet.java:1001) at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:945) at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:867) at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:951) at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:853) at javax.servlet.http.HttpServlet.service(HttpServlet.java:647) at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:827) at javax.servlet.http.HttpServlet.service(HttpServlet.java:728) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.dspace.app.xmlui.cocoon.SetCharacterEncodingFilter.doFilter(SetCharacterEncodingFilter.java:113) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.dspace.app.xmlui.cocoon.DSpaceCocoonServletFilter.doFilter(DSpaceCocoonServletFilter.java:160) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.dspace.app.xmlui.cocoon.servlet.multipart.DSpaceMultipartFilter.doFilter(DSpaceMultipartFilter.java:119) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.dspace.utils.servlet.DSpaceWebappServletFilter.doFilter(DSpaceWebappServletFilter.java:78) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110) at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:492) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:165) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104) at org.apache.catalina.valves.CrawlerSessionManagerValve.invoke(CrawlerSessionManagerValve.java:235) at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:451) at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1201) at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:654) at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:317) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61) at java.lang.Thread.run(Thread.java:750) ``` - So this is a broken side effect from the `org.apache.cocoon.uploads.autosave=false` change I made a few weeks ago - Importing the CSV via the command line works fine ## 2022-10-04 - I stumbled across more low-quality thumbnails on CGSpace - Some have the description "Generated Thumbnail", and others are manually uploaded ".jpg.jpg" ones... - I want to develop some more thumbnail fixer scripts to the cgspace-java-helpers suite: - If an item has an `IM Thumbnail` and a `Generated Thumbnail` in the `THUMBNAIL` bundle, remove the `Generated Thumbnail` - If an item has a PDF bitstream and a JPG bitstream with description /thumbnail/ in the ORIGINAL bundle, remove the /thumbnail/ bitstream in the ORIGINAL bundle and try to remove the /thumbnail/.jpg bitstream in the THUMBNAIL bundle ## 2022-10-05 - I updated the [cgspace-java-helpers](https://github.com/ilri/cgspace-java-helpers) to include a new `FixLowQualityThumbnails` script to detect the low-quality thumbnails I found above - Add missing ORCID identifier for an Alliance author