diff --git a/content/post/2018-01.md b/content/post/2018-01.md index c125dede7..74016b218 100644 --- a/content/post/2018-01.md +++ b/content/post/2018-01.md @@ -918,6 +918,43 @@ $ time schedtool -D -e ionice -c2 -n7 nice -n19 /home/cgspace.cgiar.org/bin/dspa - Peter emailed to ask why [this item](https://cgspace.cgiar.org/handle/10568/88090) doesn't have an Altmetric badge on CGSpace but does have one on the [Altmetric dashboard](https://www.altmetric.com/details/26709041) - Looks like our badge code calls the `handle` endpoint which doesn't exist: +``` https://api.altmetric.com/v1/handle/10568/88090 +``` - I told Peter we should keep an eye out and try again next week + +## 2018-01-20 + +- Run the authority indexing script on CGSpace and of course it died: + +``` +$ time schedtool -D -e ionice -c2 -n7 nice -n19 /home/cgspace.cgiar.org/bin/dspace index-authority +Retrieving all data +Initialize org.dspace.authority.indexer.DSpaceAuthorityIndexer +Exception: null +java.lang.NullPointerException + at org.dspace.authority.AuthorityValueGenerator.generateRaw(AuthorityValueGenerator.java:82) + at org.dspace.authority.AuthorityValueGenerator.generate(AuthorityValueGenerator.java:39) + at org.dspace.authority.indexer.DSpaceAuthorityIndexer.prepareNextValue(DSpaceAuthorityIndexer.java:201) + at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:132) + at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:144) + at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:144) + at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:159) + at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:144) + at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:144) + at org.dspace.authority.indexer.AuthorityIndexClient.main(AuthorityIndexClient.java:61) + at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) + at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) + at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) + at java.lang.reflect.Method.invoke(Method.java:498) + at org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.java:226) + at org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:78) + +real 7m2.241s +user 1m33.198s +sys 0m12.317s +``` + +- I tested the abstract cleanups on Bioversity's Journal Articles collection again that I had started a few days ago +- In the end there were 324 items in the collection that were Limited Access, but only 199 had abstracts diff --git a/public/2018-01/index.html b/public/2018-01/index.html index 779fd0102..70ad25f33 100644 --- a/public/2018-01/index.html +++ b/public/2018-01/index.html @@ -92,7 +92,7 @@ Danny wrote to ask for help renewing the wildcard ilri.org certificate and I adv - + @@ -194,9 +194,9 @@ Danny wrote to ask for help renewing the wildcard ilri.org certificate and I adv "@type": "BlogPosting", "headline": "January, 2018", "url": "https://alanorth.github.io/cgspace-notes/2018-01/", - "wordCount": "5116", + "wordCount": "5226", "datePublished": "2018-01-02T08:35:54-08:00", - "dateModified": "2018-01-19T17:45:27+02:00", + "dateModified": "2018-01-19T20:21:12+02:00", "author": { "@type": "Person", "name": "Alan Orth" @@ -1273,12 +1273,51 @@ $ time schedtool -D -e ionice -c2 -n7 nice -n19 /home/cgspace.cgiar.org/bin/dspa
  • Looks like our badge code calls the handle endpoint which doesn’t exist:
  • -

    https://api.altmetric.com/v1/handle/10568/88090

    +
    https://api.altmetric.com/v1/handle/10568/88090
    +
    +

    2018-01-20

    + + + +
    $ time schedtool -D -e ionice -c2 -n7 nice -n19 /home/cgspace.cgiar.org/bin/dspace index-authority 
    +Retrieving all data 
    +Initialize org.dspace.authority.indexer.DSpaceAuthorityIndexer 
    +Exception: null
    +java.lang.NullPointerException
    +        at org.dspace.authority.AuthorityValueGenerator.generateRaw(AuthorityValueGenerator.java:82)
    +        at org.dspace.authority.AuthorityValueGenerator.generate(AuthorityValueGenerator.java:39)
    +        at org.dspace.authority.indexer.DSpaceAuthorityIndexer.prepareNextValue(DSpaceAuthorityIndexer.java:201)
    +        at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:132)
    +        at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:144)
    +        at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:144)
    +        at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:159)
    +        at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:144)
    +        at org.dspace.authority.indexer.DSpaceAuthorityIndexer.hasMore(DSpaceAuthorityIndexer.java:144)
    +        at org.dspace.authority.indexer.AuthorityIndexClient.main(AuthorityIndexClient.java:61)
    +        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    +        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    +        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    +        at java.lang.reflect.Method.invoke(Method.java:498)
    +        at org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.java:226)
    +        at org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:78)
    + 
    +real    7m2.241s
    +user    1m33.198s
    +sys     0m12.317s
    +
    + + + diff --git a/public/sitemap.xml b/public/sitemap.xml index e6ffabc17..344cd4d23 100644 --- a/public/sitemap.xml +++ b/public/sitemap.xml @@ -4,7 +4,7 @@ https://alanorth.github.io/cgspace-notes/2018-01/ - 2018-01-19T17:45:27+02:00 + 2018-01-19T20:21:12+02:00 @@ -144,7 +144,7 @@ https://alanorth.github.io/cgspace-notes/ - 2018-01-19T17:45:27+02:00 + 2018-01-19T20:21:12+02:00 0 @@ -155,7 +155,7 @@ https://alanorth.github.io/cgspace-notes/tags/notes/ - 2018-01-19T17:45:27+02:00 + 2018-01-19T20:21:12+02:00 0 @@ -167,13 +167,13 @@ https://alanorth.github.io/cgspace-notes/post/ - 2018-01-19T17:45:27+02:00 + 2018-01-19T20:21:12+02:00 0 https://alanorth.github.io/cgspace-notes/tags/ - 2018-01-19T17:45:27+02:00 + 2018-01-19T20:21:12+02:00 0