From f8fa8a04438913a2711ac48df0b169775a2856dc Mon Sep 17 00:00:00 2001 From: Alan Orth Date: Sun, 10 Sep 2017 13:35:51 +0300 Subject: [PATCH] Update notes --- content/post/2017-05.md | 2 +- content/post/2017-09.md | 15 +++++++++++ public/2015-11/index.html | 4 +-- public/2015-12/index.html | 4 +-- public/2016-01/index.html | 4 +-- public/2016-02/index.html | 4 +-- public/2016-03/index.html | 4 +-- public/2016-04/index.html | 4 +-- public/2016-05/index.html | 4 +-- public/2016-06/index.html | 4 +-- public/2016-07/index.html | 4 +-- public/2016-08/index.html | 4 +-- public/2016-09/index.html | 4 +-- public/2016-10/index.html | 4 +-- public/2016-11/index.html | 4 +-- public/2016-12/index.html | 4 +-- public/2017-01/index.html | 4 +-- public/2017-02/index.html | 4 +-- public/2017-03/index.html | 4 +-- public/2017-04/index.html | 4 +-- public/2017-05/index.html | 6 ++--- public/2017-06/index.html | 4 +-- public/2017-07/index.html | 4 +-- public/2017-08/index.html | 4 +-- public/2017-09/index.html | 24 ++++++++++++++--- public/sitemap.xml | 54 +++++++++++++++++++-------------------- 26 files changed, 109 insertions(+), 76 deletions(-) diff --git a/content/post/2017-05.md b/content/post/2017-05.md index 7d5165714..ad6a0e087 100644 --- a/content/post/2017-05.md +++ b/content/post/2017-05.md @@ -86,7 +86,7 @@ $ for item in /home/aorth/10947-1/ITEM@10947-*; do [dspace]/bin/dspace packager - Clean these up in the database using: ``` -dspace=# delete from metadatavalue where resource_type_id=2 and text_value='' +dspace=# delete from metadatavalue where resource_type_id=2 and text_value=''; ``` - I ended up running into issues during data cleaning and decided to wipe out the entire community and re-sync DSpace Test assetstore and database from CGSpace rather than waiting for the cleanup task to clean up diff --git a/content/post/2017-09.md b/content/post/2017-09.md index 05c3d4814..3ea46c4af 100644 --- a/content/post/2017-09.md +++ b/content/post/2017-09.md @@ -14,3 +14,18 @@ tags = ["Notes"] ## 2017-09-07 - Ask Sisay to clean up the WLE approvers a bit, as Marianne's user account is both in the approvers step as well as the group + +## 2017-09-10 + +- Delete 58 blank metadata values from the CGSpace database: + +``` +dspace=# delete from metadatavalue where resource_type_id=2 and text_value=''; +DELETE 58 +``` + +- I also ran it on DSpace Test because we'll be migrating the CGIAR Library soon and it would be good to catch these before we migrate +- Run system updates and restart DSpace Test +- We only have 7.7GB of free space on DSpace Test so I need to copy some data off of it before doing the CGIAR Library migration (requires lots of exporting and creating temp files) +- I still have the original data from the CGIAR Library so I've zipped it up and sent it off to linode18 for now +- sha256sum of `original-cgiar-library-6.6GB.tar.gz` is: bcfabb52f51cbdf164b61b7e9b3a0e498479e4c1ed1d547d32d11f44c0d5eb8a diff --git a/public/2015-11/index.html b/public/2015-11/index.html index f0b4ba751..abef934fe 100644 --- a/public/2015-11/index.html +++ b/public/2015-11/index.html @@ -25,7 +25,7 @@ $ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspac - + @@ -63,7 +63,7 @@ $ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspac "url": "https://alanorth.github.io/cgspace-notes/2015-11/", "wordCount": "798", "datePublished": "2015-11-23T17:00:57+03:00", - "dateModified": "2015-11-23T17:00:57+03:00", + "dateModified": "2016-09-28T17:02:30+03:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2015-12/index.html b/public/2015-12/index.html index 9f8416b1d..58535bc3b 100644 --- a/public/2015-12/index.html +++ b/public/2015-12/index.html @@ -26,7 +26,7 @@ Replace lzop with xz in log compression cron jobs on DSpace Test—it uses less - + @@ -65,7 +65,7 @@ Replace lzop with xz in log compression cron jobs on DSpace Test—it uses less "url": "https://alanorth.github.io/cgspace-notes/2015-12/", "wordCount": "753", "datePublished": "2015-12-02T13:18:00+03:00", - "dateModified": "2015-12-02T13:18:00+03:00", + "dateModified": "2017-01-09T16:18:07+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-01/index.html b/public/2016-01/index.html index 8752a1913..55364f584 100644 --- a/public/2016-01/index.html +++ b/public/2016-01/index.html @@ -21,7 +21,7 @@ Update GitHub wiki for documentation of maintenance tasks. - + @@ -55,7 +55,7 @@ Update GitHub wiki for documentation of maintenance tasks. "url": "https://alanorth.github.io/cgspace-notes/2016-01/", "wordCount": "466", "datePublished": "2016-01-13T13:18:00+03:00", - "dateModified": "2016-01-13T13:18:00+03:00", + "dateModified": "2017-01-09T16:18:07+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-02/index.html b/public/2016-02/index.html index acdee7303..56062a158 100644 --- a/public/2016-02/index.html +++ b/public/2016-02/index.html @@ -28,7 +28,7 @@ Also, lots of things like “COTE D`LVOIRE” and “COTE D IVOIRE&r - + @@ -69,7 +69,7 @@ Also, lots of things like “COTE D`LVOIRE” and “COTE D IVOIRE&r "url": "https://alanorth.github.io/cgspace-notes/2016-02/", "wordCount": "1657", "datePublished": "2016-02-05T13:18:00+03:00", - "dateModified": "2016-02-05T13:18:00+03:00", + "dateModified": "2017-01-09T16:18:07+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-03/index.html b/public/2016-03/index.html index d08263c2d..4fa01090d 100644 --- a/public/2016-03/index.html +++ b/public/2016-03/index.html @@ -21,7 +21,7 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja - + @@ -55,7 +55,7 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja "url": "https://alanorth.github.io/cgspace-notes/2016-03/", "wordCount": "1581", "datePublished": "2016-03-02T16:50:00+03:00", - "dateModified": "2016-03-02T16:50:00+03:00", + "dateModified": "2017-01-09T16:18:07+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-04/index.html b/public/2016-04/index.html index aa9890c59..138469d06 100644 --- a/public/2016-04/index.html +++ b/public/2016-04/index.html @@ -23,7 +23,7 @@ Also, I noticed the checker log has some errors we should pay attention to: - + @@ -59,7 +59,7 @@ Also, I noticed the checker log has some errors we should pay attention to: "url": "https://alanorth.github.io/cgspace-notes/2016-04/", "wordCount": "2006", "datePublished": "2016-04-04T11:06:00+03:00", - "dateModified": "2016-04-04T11:06:00+03:00", + "dateModified": "2016-09-28T17:02:30+03:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-05/index.html b/public/2016-05/index.html index 4691ec8a2..ad82dcad4 100644 --- a/public/2016-05/index.html +++ b/public/2016-05/index.html @@ -25,7 +25,7 @@ There are 3,000 IPs accessing the REST API in a 24-hour period! - + @@ -63,7 +63,7 @@ There are 3,000 IPs accessing the REST API in a 24-hour period! "url": "https://alanorth.github.io/cgspace-notes/2016-05/", "wordCount": "1349", "datePublished": "2016-05-01T23:06:00+03:00", - "dateModified": "2016-05-01T23:06:00+03:00", + "dateModified": "2017-01-09T16:18:07+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-06/index.html b/public/2016-06/index.html index f59c7ebd4..5b8413d0f 100644 --- a/public/2016-06/index.html +++ b/public/2016-06/index.html @@ -24,7 +24,7 @@ Working on second phase of metadata migration, looks like this will work for mov - + @@ -61,7 +61,7 @@ Working on second phase of metadata migration, looks like this will work for mov "url": "https://alanorth.github.io/cgspace-notes/2016-06/", "wordCount": "1549", "datePublished": "2016-06-01T10:53:00+03:00", - "dateModified": "2016-06-01T10:53:00+03:00", + "dateModified": "2017-01-09T16:18:07+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-07/index.html b/public/2016-07/index.html index 9f22f49f3..ed02e2483 100644 --- a/public/2016-07/index.html +++ b/public/2016-07/index.html @@ -32,7 +32,7 @@ In this case the select query was showing 95 results before the update - + @@ -77,7 +77,7 @@ In this case the select query was showing 95 results before the update "url": "https://alanorth.github.io/cgspace-notes/2016-07/", "wordCount": "866", "datePublished": "2016-07-01T10:53:00+03:00", - "dateModified": "2016-07-01T10:53:00+03:00", + "dateModified": "2017-01-09T16:18:07+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-08/index.html b/public/2016-08/index.html index f1501aed6..758c4a173 100644 --- a/public/2016-08/index.html +++ b/public/2016-08/index.html @@ -29,7 +29,7 @@ $ git rebase -i dspace-5.5 - + @@ -71,7 +71,7 @@ $ git rebase -i dspace-5.5 "url": "https://alanorth.github.io/cgspace-notes/2016-08/", "wordCount": "1514", "datePublished": "2016-08-01T15:53:00+03:00", - "dateModified": "2016-08-01T15:53:00+03:00", + "dateModified": "2017-01-09T16:18:07+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-09/index.html b/public/2016-09/index.html index 2cb8d7e34..5e8b24d7c 100644 --- a/public/2016-09/index.html +++ b/public/2016-09/index.html @@ -25,7 +25,7 @@ $ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b "dc=cgiarad,dc=or - + @@ -63,7 +63,7 @@ $ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b "dc=cgiarad,dc=or "url": "https://alanorth.github.io/cgspace-notes/2016-09/", "wordCount": "3298", "datePublished": "2016-09-01T15:53:00+03:00", - "dateModified": "2016-09-01T15:53:00+03:00", + "dateModified": "2017-01-09T16:18:07+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-10/index.html b/public/2016-10/index.html index 52f8155bd..7f31f633f 100644 --- a/public/2016-10/index.html +++ b/public/2016-10/index.html @@ -29,7 +29,7 @@ I exported a random item’s metadata as CSV, deleted all columns except id - + @@ -71,7 +71,7 @@ I exported a random item’s metadata as CSV, deleted all columns except id "url": "https://alanorth.github.io/cgspace-notes/2016-10/", "wordCount": "1828", "datePublished": "2016-10-03T15:53:00+03:00", - "dateModified": "2016-10-03T15:53:00+03:00", + "dateModified": "2017-01-10T16:21:47+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-11/index.html b/public/2016-11/index.html index 19a7dfef5..060c805f5 100644 --- a/public/2016-11/index.html +++ b/public/2016-11/index.html @@ -21,7 +21,7 @@ Add dc.type to the output options for Atmire’s Listings and Reports module - + @@ -55,7 +55,7 @@ Add dc.type to the output options for Atmire’s Listings and Reports module "url": "https://alanorth.github.io/cgspace-notes/2016-11/", "wordCount": "2825", "datePublished": "2016-11-01T09:21:00+03:00", - "dateModified": "2016-11-01T09:21:00+03:00", + "dateModified": "2017-01-10T16:21:47+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2016-12/index.html b/public/2016-12/index.html index ae740147b..57b36d3bf 100644 --- a/public/2016-12/index.html +++ b/public/2016-12/index.html @@ -33,7 +33,7 @@ Another worrying error from dspace.log is: - + @@ -79,7 +79,7 @@ Another worrying error from dspace.log is: "url": "https://alanorth.github.io/cgspace-notes/2016-12/", "wordCount": "4078", "datePublished": "2016-12-02T10:43:00+03:00", - "dateModified": "2016-12-02T10:43:00+03:00", + "dateModified": "2017-01-10T16:21:47+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2017-01/index.html b/public/2017-01/index.html index be60aa640..0996bcefa 100644 --- a/public/2017-01/index.html +++ b/public/2017-01/index.html @@ -21,7 +21,7 @@ I asked on the dspace-tech mailing list because it seems to be broken, and actua - + @@ -55,7 +55,7 @@ I asked on the dspace-tech mailing list because it seems to be broken, and actua "url": "https://alanorth.github.io/cgspace-notes/2017-01/", "wordCount": "1594", "datePublished": "2017-01-02T10:43:00+03:00", - "dateModified": "2017-01-02T10:43:00+03:00", + "dateModified": "2017-01-29T13:18:32+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2017-02/index.html b/public/2017-02/index.html index 5c6e304da..885fde4db 100644 --- a/public/2017-02/index.html +++ b/public/2017-02/index.html @@ -35,7 +35,7 @@ Looks like we’ll be using cg.identifier.ccafsprojectpii as the field name - + @@ -83,7 +83,7 @@ Looks like we’ll be using cg.identifier.ccafsprojectpii as the field name "url": "https://alanorth.github.io/cgspace-notes/2017-02/", "wordCount": "2028", "datePublished": "2017-02-07T07:04:52-08:00", - "dateModified": "2017-02-07T07:04:52-08:00", + "dateModified": "2017-02-28T22:58:29+02:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2017-03/index.html b/public/2017-03/index.html index df4ab9380..f12795090 100644 --- a/public/2017-03/index.html +++ b/public/2017-03/index.html @@ -37,7 +37,7 @@ $ identify ~/Desktop/alc_contrastes_desafios.jpg - + @@ -87,7 +87,7 @@ $ identify ~/Desktop/alc_contrastes_desafios.jpg "url": "https://alanorth.github.io/cgspace-notes/2017-03/", "wordCount": "1538", "datePublished": "2017-03-01T17:08:52+02:00", - "dateModified": "2017-03-01T17:08:52+02:00", + "dateModified": "2017-03-31T05:36:10+03:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2017-04/index.html b/public/2017-04/index.html index cdd0f07f8..c7a95587e 100644 --- a/public/2017-04/index.html +++ b/public/2017-04/index.html @@ -30,7 +30,7 @@ $ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p "ImageMagick PDF Th - + @@ -73,7 +73,7 @@ $ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p "ImageMagick PDF Th "url": "https://alanorth.github.io/cgspace-notes/2017-04/", "wordCount": "2917", "datePublished": "2017-04-02T17:08:52+02:00", - "dateModified": "2017-04-02T17:08:52+02:00", + "dateModified": "2017-04-26T13:35:10+03:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2017-05/index.html b/public/2017-05/index.html index 8bdb3e5a9..1896f9d8e 100644 --- a/public/2017-05/index.html +++ b/public/2017-05/index.html @@ -13,7 +13,7 @@ - + @@ -39,7 +39,7 @@ "url": "https://alanorth.github.io/cgspace-notes/2017-05/", "wordCount": "2412", "datePublished": "2017-05-01T16:21:52+02:00", - "dateModified": "2017-05-01T16:21:52+02:00", + "dateModified": "2017-05-29T13:15:22+03:00", "author": { "@type": "Person", "name": "Alan Orth" @@ -209,7 +209,7 @@ $ for item in /home/aorth/10947-1/ITEM@10947-*; do [dspace]/bin/dspace packager
  • Clean these up in the database using:
  • -
    dspace=# delete from metadatavalue where resource_type_id=2 and text_value=''
    +
    dspace=# delete from metadatavalue where resource_type_id=2 and text_value='';
     
      diff --git a/public/2017-06/index.html b/public/2017-06/index.html index 75613cc61..ac9587f7c 100644 --- a/public/2017-06/index.html +++ b/public/2017-06/index.html @@ -13,7 +13,7 @@ - + @@ -39,7 +39,7 @@ "url": "https://alanorth.github.io/cgspace-notes/2017-06/", "wordCount": "1261", "datePublished": "2017-06-01T10:14:52+03:00", - "dateModified": "2017-06-01T10:14:52+03:00", + "dateModified": "2017-06-30T18:34:51+03:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2017-07/index.html b/public/2017-07/index.html index c9560406a..8bf518514 100644 --- a/public/2017-07/index.html +++ b/public/2017-07/index.html @@ -27,7 +27,7 @@ We can use PostgreSQL’s extended output format (-x) plus sed to format the - + @@ -67,7 +67,7 @@ We can use PostgreSQL’s extended output format (-x) plus sed to format the "url": "https://alanorth.github.io/cgspace-notes/2017-07/", "wordCount": "1151", "datePublished": "2017-07-01T18:03:52+03:00", - "dateModified": "2017-07-01T18:03:52+03:00", + "dateModified": "2017-08-01T08:55:37+03:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2017-08/index.html b/public/2017-08/index.html index 5ee9053a7..ee2a9b3da 100644 --- a/public/2017-08/index.html +++ b/public/2017-08/index.html @@ -37,7 +37,7 @@ Then I cleaned up the author authorities and HTML characters in OpenRefine and s - + @@ -87,7 +87,7 @@ Then I cleaned up the author authorities and HTML characters in OpenRefine and s "url": "https://alanorth.github.io/cgspace-notes/2017-08/", "wordCount": "3542", "datePublished": "2017-08-01T11:51:52+03:00", - "dateModified": "2017-08-01T11:51:52+03:00", + "dateModified": "2017-08-31T22:40:57+07:00", "author": { "@type": "Person", "name": "Alan Orth" diff --git a/public/2017-09/index.html b/public/2017-09/index.html index fdab6786b..deeb88b4a 100644 --- a/public/2017-09/index.html +++ b/public/2017-09/index.html @@ -19,7 +19,7 @@ Linode sent an alert that CGSpace (linode18) was using 261% CPU for the past two - + @@ -49,9 +49,9 @@ Linode sent an alert that CGSpace (linode18) was using 261% CPU for the past two "@type": "BlogPosting", "headline": "September, 2017", "url": "https://alanorth.github.io/cgspace-notes/2017-09/", - "wordCount": "43", + "wordCount": "158", "datePublished": "2017-09-07T16:54:52+07:00", - "dateModified": "2017-09-07T16:54:52+07:00", + "dateModified": "2017-09-07T17:02:57+07:00", "author": { "@type": "Person", "name": "Alan Orth" @@ -128,6 +128,24 @@ Linode sent an alert that CGSpace (linode18) was using 261% CPU for the past two
    • Ask Sisay to clean up the WLE approvers a bit, as Marianne’s user account is both in the approvers step as well as the group
    +

    2017-09-10

    + +
      +
    • Delete 58 blank metadata values from the CGSpace database:
    • +
    + +
    dspace=# delete from metadatavalue where resource_type_id=2 and text_value='';
    +DELETE 58
    +
    + +
      +
    • I also ran it on DSpace Test because we’ll be migrating the CGIAR Library soon and it would be good to catch these before we migrate
    • +
    • Run system updates and restart DSpace Test
    • +
    • We only have 7.7GB of free space on DSpace Test so I need to copy some data off of it before doing the CGIAR Library migration (requires lots of exporting and creating temp files)
    • +
    • I still have the original data from the CGIAR Library so I’ve zipped it up and sent it off to linode18 for now
    • +
    • sha256sum of original-cgiar-library-6.6GB.tar.gz is: bcfabb52f51cbdf164b61b7e9b3a0e498479e4c1ed1d547d32d11f44c0d5eb8a
    • +
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