Update notes for 2018-03-06

content/post/2018-03.md

@@ -26,3 +26,24 @@ $ ./delete-metadata-values.py -i Delete-3-Authors-2018-03-06.csv -db dspace -u d
 
 - This time there were no errors in whitespace but I did have to correct one incorrectly encoded accent character
 - Add new CRP subject "GRAIN LEGUMES AND DRYLAND CEREALS" to `input-forms.xml` ([#358](https://github.com/ilri/DSpace/pull/358))
+- Merge the ORCID integration stuff in to `5_x-prod` for deployment on CGSpace soon ([#359](https://github.com/ilri/DSpace/pull/359))
+- Deploy ORCID changes on CGSpace (linode18), run all system updates, and reboot the server
+- Run all system updates on DSpace Test and reboot server
+- I ran the [orcid-authority-to-item.py](https://gist.github.com/alanorth/24d8081a5dc25e2a4e27e548e7e2389c) script on CGSpace and mapped 2,864 ORCID identifiers from Solr to item metadata
+
+```
+$ ./orcid-authority-to-item.py -db dspace -u dspace -p 'fuuu' -s http://localhost:8081/solr -d
+```
+
+- I ran the DSpace cleanup script on CGSpace and it threw an error (as always):
+
+```
+Error: ERROR: update or delete on table "bitstream" violates foreign key constraint "bundle_primary_bitstream_id_fkey" on table "bundle"
+  Detail: Key (bitstream_id)=(150659) is still referenced from table "bundle".
+```
+
+- The solution is, as always:
+```
+$ psql dspace -c 'update bundle set primary_bitstream_id=NULL where primary_bitstream_id in (150659);'
+UPDATE 1
+```

docs/2018-03/index.html

@@ -20,7 +20,7 @@ Export a CSV of the IITA community metadata for Martin Mueller
 
 <meta property="article:published_time" content="2018-03-02T16:07:54&#43;02:00"/>
 
-<meta property="article:modified_time" content="2018-03-06T12:25:26&#43;02:00"/>
+<meta property="article:modified_time" content="2018-03-06T14:45:51&#43;02:00"/>
 
 
 
@@ -51,9 +51,9 @@ Export a CSV of the IITA community metadata for Martin Mueller
   "@type": "BlogPosting",
   "headline": "March, 2018",
   "url": "https://alanorth.github.io/cgspace-notes/2018-03/",
-  "wordCount": "137",
+  "wordCount": "262",
   "datePublished": "2018-03-02T16:07:54&#43;02:00",
-  "dateModified": "2018-03-06T12:25:26&#43;02:00",
+  "dateModified": "2018-03-06T14:45:51&#43;02:00",
   "author": {
     "@type": "Person",
     "name": "Alan Orth"
@@ -146,6 +146,29 @@ $ ./delete-metadata-values.py -i Delete-3-Authors-2018-03-06.csv -db dspace -u d
 <ul>
 <li>This time there were no errors in whitespace but I did have to correct one incorrectly encoded accent character</li>
 <li>Add new CRP subject &ldquo;GRAIN LEGUMES AND DRYLAND CEREALS&rdquo; to <code>input-forms.xml</code> (<a href="https://github.com/ilri/DSpace/pull/358">#358</a>)</li>
+<li>Merge the ORCID integration stuff in to <code>5_x-prod</code> for deployment on CGSpace soon (<a href="https://github.com/ilri/DSpace/pull/359">#359</a>)</li>
+<li>Deploy ORCID changes on CGSpace (linode18), run all system updates, and reboot the server</li>
+<li>Run all system updates on DSpace Test and reboot server</li>
+<li>I ran the <a href="https://gist.github.com/alanorth/24d8081a5dc25e2a4e27e548e7e2389c">orcid-authority-to-item.py</a> script on CGSpace and mapped 2,864 ORCID identifiers from Solr to item metadata</li>
+</ul>
+
+<pre><code>$ ./orcid-authority-to-item.py -db dspace -u dspace -p 'fuuu' -s http://localhost:8081/solr -d
+</code></pre>
+
+<ul>
+<li>I ran the DSpace cleanup script on CGSpace and it threw an error (as always):</li>
+</ul>
+
+<pre><code>Error: ERROR: update or delete on table &quot;bitstream&quot; violates foreign key constraint &quot;bundle_primary_bitstream_id_fkey&quot; on table &quot;bundle&quot;
+  Detail: Key (bitstream_id)=(150659) is still referenced from table &quot;bundle&quot;.
+</code></pre>
+
+<ul>
+<li>The solution is, as always:
+<code>
+$ psql dspace -c 'update bundle set primary_bitstream_id=NULL where primary_bitstream_id in (150659);'
+UPDATE 1
+</code></li>
 </ul>
 
   

docs/sitemap.xml

@@ -4,7 +4,7 @@
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/2018-03/</loc>
-    <lastmod>2018-03-06T12:25:26+02:00</lastmod>
+    <lastmod>2018-03-06T14:45:51+02:00</lastmod>
   </url>
   
   <url>
@@ -154,7 +154,7 @@
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/</loc>
-    <lastmod>2018-03-06T12:25:26+02:00</lastmod>
+    <lastmod>2018-03-06T14:45:51+02:00</lastmod>
     <priority>0</priority>
   </url>
   
@@ -165,7 +165,7 @@
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
-    <lastmod>2018-03-06T12:25:26+02:00</lastmod>
+    <lastmod>2018-03-06T14:45:51+02:00</lastmod>
     <priority>0</priority>
   </url>
   
@@ -177,13 +177,13 @@
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/post/</loc>
-    <lastmod>2018-03-06T12:25:26+02:00</lastmod>
+    <lastmod>2018-03-06T14:45:51+02:00</lastmod>
     <priority>0</priority>
   </url>
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
-    <lastmod>2018-03-06T12:25:26+02:00</lastmod>
+    <lastmod>2018-03-06T14:45:51+02:00</lastmod>
     <priority>0</priority>
   </url>