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Alan Orth 2019-03-01 12:17:17 +01:00
parent d257a40705
commit bb8206e0e9
Signed by: alanorth
GPG Key ID: 0FB860CC9C45B1B9
75 changed files with 1318 additions and 825 deletions
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4
docs/2015-11/index.html
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@ -279,6 +279,8 @@ db.statementpool = true
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -287,8 +289,6 @@ db.statementpool = true
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2015-12/index.html
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@ -296,6 +296,8 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -304,8 +306,6 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-01/index.html
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@ -211,6 +211,8 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} \; | so
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -219,8 +221,6 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} \; | so
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-02/index.html
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@ -464,6 +464,8 @@ Bitstream: tést señora alimentación.pdf
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -472,8 +474,6 @@ Bitstream: tést señora alimentación.pdf
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-03/index.html
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@ -364,6 +364,8 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -372,8 +374,6 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-04/index.html
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@ -581,6 +581,8 @@ dspace.log.2016-04-27:7271
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -589,8 +591,6 @@ dspace.log.2016-04-27:7271
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-05/index.html
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@ -431,6 +431,8 @@ sys 0m20.540s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -439,8 +441,6 @@ sys 0m20.540s
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-06/index.html
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@ -476,6 +476,8 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -484,8 +486,6 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-07/index.html
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@ -394,6 +394,8 @@ discovery.index.authority.ignore-variants=true
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -402,8 +404,6 @@ discovery.index.authority.ignore-variants=true
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-08/index.html
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@ -467,6 +467,8 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -475,8 +477,6 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-09/index.html
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@ -767,6 +767,8 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -775,8 +777,6 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-10/index.html
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@ -452,6 +452,8 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -460,8 +462,6 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-11/index.html
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@ -669,6 +669,8 @@ org.dspace.discovery.SearchServiceException: Error executing query
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -677,8 +679,6 @@ org.dspace.discovery.SearchServiceException: Error executing query
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-12/index.html
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@ -905,6 +905,8 @@ $ exit
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -913,8 +915,6 @@ $ exit
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-01/index.html
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@ -450,6 +450,8 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -458,8 +460,6 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-02/index.html
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@ -522,6 +522,8 @@ COPY 1968
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -530,8 +532,6 @@ COPY 1968
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-03/index.html
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@ -436,6 +436,8 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -444,8 +446,6 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-04/index.html
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@ -715,6 +715,8 @@ $ gem install compass -v 1.0.3
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -723,8 +725,6 @@ $ gem install compass -v 1.0.3
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-05/index.html
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@ -475,6 +475,8 @@ UPDATE 187
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -483,8 +485,6 @@ UPDATE 187
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-06/index.html
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@ -293,6 +293,8 @@ $ JAVA_OPTS=&quot;-Xmx1024m -Dfile.encoding=UTF-8&quot; [dspace]/bin/dspace impo
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -301,8 +303,6 @@ $ JAVA_OPTS=&quot;-Xmx1024m -Dfile.encoding=UTF-8&quot; [dspace]/bin/dspace impo
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-07/index.html
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@ -322,6 +322,8 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -330,8 +332,6 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-08/index.html
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@ -608,6 +608,8 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -616,8 +618,6 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-09/index.html
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@ -780,6 +780,8 @@ Cert Status: good
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -788,8 +790,6 @@ Cert Status: good
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-10/index.html
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@ -545,6 +545,8 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -553,8 +555,6 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-11/index.html
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@ -1189,6 +1189,8 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -1197,8 +1199,6 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-12/index.html
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@ -954,6 +954,8 @@ DELETE 20
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -962,8 +964,6 @@ DELETE 20
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-01/index.html
View File

@ -1781,6 +1781,8 @@ Catalina:type=Manager,context=/,host=localhost activeSessions 8
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -1789,8 +1791,6 @@ Catalina:type=Manager,context=/,host=localhost activeSessions 8
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-02/index.html
View File

@ -1300,6 +1300,8 @@ UPDATE 3
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -1308,8 +1310,6 @@ UPDATE 3
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-03/index.html
View File

@ -727,6 +727,8 @@ Fixed 5 occurences of: GENEBANKS
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -735,8 +737,6 @@ Fixed 5 occurences of: GENEBANKS
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-04/index.html
View File

@ -724,6 +724,8 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -732,8 +734,6 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-05/index.html
View File

@ -603,6 +603,8 @@ $ psql -h localhost -U postgres dspacetest
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -611,8 +613,6 @@ $ psql -h localhost -U postgres dspacetest
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-06/index.html
View File

@ -583,6 +583,8 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -591,8 +593,6 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-07/index.html
View File

@ -694,6 +694,8 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -702,8 +704,6 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-08/index.html
View File

@ -530,6 +530,8 @@ $ dspace database migrate ignored
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -538,8 +540,6 @@ $ dspace database migrate ignored
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-09/index.html
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@ -908,6 +908,8 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -916,8 +918,6 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-10/index.html
View File

@ -811,6 +811,8 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -819,8 +821,6 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-11/index.html
View File

@ -669,6 +669,8 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -677,8 +679,6 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2018-12/index.html
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@ -734,6 +734,8 @@ UPDATE 1
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -742,8 +744,6 @@ UPDATE 1
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/2019-01/index.html
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@ -1408,6 +1408,8 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -1416,8 +1418,6 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

8
docs/2019-02/index.html
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@ -42,7 +42,7 @@ sys 0m1.979s
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-02/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-02/" />
<meta property="article:published_time" content="2019-02-01T21:37:30&#43;02:00"/> <meta property="article:published_time" content="2019-02-01T21:37:30&#43;02:00"/>
<meta property="article:modified_time" content="2019-02-28T08:20:19-08:00"/> <meta property="article:modified_time" content="2019-02-28T09:27:07-08:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="February, 2019"/> <meta name="twitter:title" content="February, 2019"/>
@ -91,7 +91,7 @@ sys 0m1.979s
"url": "https://alanorth.github.io/cgspace-notes/2019-02/", "url": "https://alanorth.github.io/cgspace-notes/2019-02/",
"wordCount": "7700", "wordCount": "7700",
"datePublished": "2019-02-01T21:37:30&#43;02:00", "datePublished": "2019-02-01T21:37:30&#43;02:00",
"dateModified": "2019-02-28T08:20:19-08:00", "dateModified": "2019-02-28T09:27:07-08:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -1643,6 +1643,8 @@ Please see the DSpace documentation for assistance.
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -1651,8 +1653,6 @@ Please see the DSpace documentation for assistance.
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

184
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@ -0,0 +1,184 @@
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
<meta property="og:title" content="March, 2019" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-03/" />
<meta property="article:published_time" content="2019-03-01T12:16:30&#43;01:00"/>
<meta property="article:modified_time" content="2019-03-01T12:17:01&#43;01:00"/>
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="March, 2019"/>
<meta name="twitter:description" content="2019-03-01
"/>
<meta name="generator" content="Hugo 0.54.0" />
<script type="application/ld+json">
{
"@context": "http://schema.org",
"@type": "BlogPosting",
"headline": "March, 2019",
"url": "https://alanorth.github.io/cgspace-notes/2019-03/",
"wordCount": "1",
"datePublished": "2019-03-01T12:16:30&#43;01:00",
"dateModified": "2019-03-01T12:17:01&#43;01:00",
"author": {
"@type": "Person",
"name": "Alan Orth"
},
"keywords": "Notes"
}
</script>
<link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2019-03/">
<title>March, 2019 | CGSpace Notes</title>
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<link href="https://alanorth.github.io/cgspace-notes/css/style.css" rel="stylesheet" integrity="sha384-G5B34w7DFTumWTswxYzTX7NWfbvQEg1HbFFEg6ItN03uTAAoS2qkPS/fu3LhuuSA" crossorigin="anonymous">
</head>
<body>
<div class="blog-masthead">
<div class="container">
<nav class="nav blog-nav">
<a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
</nav>
</div>
</div>
<header class="blog-header">
<div class="container">
<h1 class="blog-title"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
<p class="lead blog-description">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
</div>
</header>
<div class="container">
<div class="row">
<div class="col-sm-8 blog-main">
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-03-01">2019-03-01</h2>
<ul>
<li></li>
</ul>
<!-- vim: set sw=2 ts=2: -->
</article>
</div> <!-- /.blog-main -->
<aside class="col-sm-3 ml-auto blog-sidebar">
<section class="sidebar-module">
<h4>Recent Posts</h4>
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
<li><a href="/cgspace-notes/2018-12/">December, 2018</a></li>
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
</ol>
</section>
<section class="sidebar-module">
<h4>Links</h4>
<ol class="list-unstyled">
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
</ol>
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<footer class="blog-footer">
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4
docs/404.html
View File

@ -88,6 +88,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -96,8 +98,6 @@
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

55
docs/categories/index.html
View File

@ -90,6 +90,28 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-03-01">2019-03-01</h2>
<ul>
<li></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
@ -394,35 +416,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-05-01">2018-05-01</h2>
<ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
<ul>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li>
</ul></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -447,6 +440,8 @@ sys 2m7.289s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -455,8 +450,6 @@ sys 2m7.289s
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -108,6 +108,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -116,8 +118,6 @@
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

77
docs/categories/page/2/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2018-04-01T16:13:54&#43;02:00"/> <meta property="og:updated_time" content="2018-05-01T16:43:54&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2018-04-01T16:13:54&#43;02:00", "dateModified": "2018-05-01T16:43:54&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-05-01">2018-05-01</h2>
<ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
<ul>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li>
</ul></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
@ -396,46 +425,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-08-01">2017-08-01</h2>
<ul>
<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
<li>This means our Tomcat Crawler Session Valve is working</li>
<li>But many of the bots are browsing dynamic URLs like:
<ul>
<li>/handle/10568/3353/discover</li>
<li>/handle/10568/16510/browse</li>
</ul></li>
<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
<li>It turns out that we&rsquo;re already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/categories/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/categories/" rel="prev" role="button">Previous page</a>
@ -460,6 +449,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -468,8 +459,6 @@ COPY 54701
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

80
docs/categories/page/3/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2017-07-01T18:03:52&#43;03:00"/> <meta property="og:updated_time" content="2017-08-01T11:51:52&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-07-01T18:03:52&#43;03:00", "dateModified": "2017-08-01T11:51:52&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,46 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-08-01">2017-08-01</h2>
<ul>
<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
<li>This means our Tomcat Crawler Session Valve is working</li>
<li>But many of the bots are browsing dynamic URLs like:
<ul>
<li>/handle/10568/3353/discover</li>
<li>/handle/10568/16510/browse</li>
</ul></li>
<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
<li>It turns out that we&rsquo;re already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
@ -352,38 +392,6 @@ DELETE 1
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-10-03">2016-10-03</h2>
<ul>
<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Need to test the following scenarios to see how author order is affected:
<ul>
<li>ORCIDs only</li>
<li>ORCIDs plus normal authors</li>
</ul></li>
<li>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
</ul>
<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/2/" rel="prev" role="button">Previous page</a>
@ -408,6 +416,8 @@ DELETE 1
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -416,8 +426,6 @@ DELETE 1
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

69
docs/categories/page/4/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2016-09-01T15:53:00&#43;03:00"/> <meta property="og:updated_time" content="2016-10-03T15:53:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2016-09-01T15:53:00&#43;03:00", "dateModified": "2016-10-03T15:53:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,38 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-10-03">2016-10-03</h2>
<ul>
<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Need to test the following scenarios to see how author order is affected:
<ul>
<li>ORCIDs only</li>
<li>ORCIDs plus normal authors</li>
</ul></li>
<li>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
</ul>
<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
@ -346,35 +378,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-12-02">2015-12-02</h2>
<ul>
<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
</ul>
<pre><code># cd /home/dspacetest.cgiar.org/log
# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/3/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/3/" rel="prev" role="button">Previous page</a>
@ -399,6 +402,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -407,8 +412,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

37
docs/categories/page/5/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2015-11-23T17:00:57&#43;03:00"/> <meta property="og:updated_time" content="2015-12-02T13:18:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2015-11-23T17:00:57&#43;03:00", "dateModified": "2015-12-02T13:18:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-12-02">2015-12-02</h2>
<ul>
<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
</ul>
<pre><code># cd /home/dspacetest.cgiar.org/log
# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
@ -143,6 +172,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -151,8 +182,6 @@
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
docs/cgiar-library-migration/index.html
View File

@ -326,6 +326,8 @@ dspace=# select setval('handle_seq',86873);
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -334,8 +336,6 @@ dspace=# select setval('handle_seq',86873);
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

59
docs/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2019-02-01T21:37:30&#43;02:00"/> <meta property="og:updated_time" content="2019-03-01T12:16:30&#43;01:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-02-01T21:37:30&#43;02:00", "dateModified": "2019-03-01T12:16:30&#43;01:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,28 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-03-01">2019-03-01</h2>
<ul>
<li></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
@ -396,35 +418,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-05-01">2018-05-01</h2>
<ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
<ul>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li>
</ul></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -449,6 +442,8 @@ sys 2m7.289s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -457,8 +452,6 @@ sys 2m7.289s
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

15
docs/index.xml
View File

@ -6,11 +6,24 @@
<description>Recent content on CGSpace Notes</description> <description>Recent content on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
<lastBuildDate>Fri, 01 Feb 2019 21:37:30 +0200</lastBuildDate> <lastBuildDate>Fri, 01 Mar 2019 12:16:30 +0100</lastBuildDate>
<atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" /> <atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" />
<item>
<title>March, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-03/</link>
<pubDate>Fri, 01 Mar 2019 12:16:30 +0100</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-03/</guid>
<description>&lt;h2 id=&#34;2019-03-01&#34;&gt;2019-03-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item> <item>
<title>February, 2019</title> <title>February, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-02/</link> <link>https://alanorth.github.io/cgspace-notes/2019-02/</link>

77
docs/page/2/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2018-04-01T16:13:54&#43;02:00"/> <meta property="og:updated_time" content="2018-05-01T16:43:54&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2018-04-01T16:13:54&#43;02:00", "dateModified": "2018-05-01T16:43:54&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-05-01">2018-05-01</h2>
<ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
<ul>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li>
</ul></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
@ -396,46 +425,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-08-01">2017-08-01</h2>
<ul>
<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
<li>This means our Tomcat Crawler Session Valve is working</li>
<li>But many of the bots are browsing dynamic URLs like:
<ul>
<li>/handle/10568/3353/discover</li>
<li>/handle/10568/16510/browse</li>
</ul></li>
<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
<li>It turns out that we&rsquo;re already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/" rel="prev" role="button">Previous page</a>
@ -460,6 +449,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -468,8 +459,6 @@ COPY 54701
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

80
docs/page/3/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2017-07-01T18:03:52&#43;03:00"/> <meta property="og:updated_time" content="2017-08-01T11:51:52&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-07-01T18:03:52&#43;03:00", "dateModified": "2017-08-01T11:51:52&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,46 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-08-01">2017-08-01</h2>
<ul>
<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
<li>This means our Tomcat Crawler Session Valve is working</li>
<li>But many of the bots are browsing dynamic URLs like:
<ul>
<li>/handle/10568/3353/discover</li>
<li>/handle/10568/16510/browse</li>
</ul></li>
<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
<li>It turns out that we&rsquo;re already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
@ -352,38 +392,6 @@ DELETE 1
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-10-03">2016-10-03</h2>
<ul>
<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Need to test the following scenarios to see how author order is affected:
<ul>
<li>ORCIDs only</li>
<li>ORCIDs plus normal authors</li>
</ul></li>
<li>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
</ul>
<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/page/2/" rel="prev" role="button">Previous page</a>
@ -408,6 +416,8 @@ DELETE 1
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -416,8 +426,6 @@ DELETE 1
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

69
docs/page/4/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2016-09-01T15:53:00&#43;03:00"/> <meta property="og:updated_time" content="2016-10-03T15:53:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2016-09-01T15:53:00&#43;03:00", "dateModified": "2016-10-03T15:53:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,38 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-10-03">2016-10-03</h2>
<ul>
<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Need to test the following scenarios to see how author order is affected:
<ul>
<li>ORCIDs only</li>
<li>ORCIDs plus normal authors</li>
</ul></li>
<li>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
</ul>
<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
@ -346,35 +378,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-12-02">2015-12-02</h2>
<ul>
<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
</ul>
<pre><code># cd /home/dspacetest.cgiar.org/log
# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/page/3/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/page/3/" rel="prev" role="button">Previous page</a>
@ -399,6 +402,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -407,8 +412,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

37
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2015-11-23T17:00:57&#43;03:00"/> <meta property="og:updated_time" content="2015-12-02T13:18:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2015-11-23T17:00:57&#43;03:00", "dateModified": "2015-12-02T13:18:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-12-02">2015-12-02</h2>
<ul>
<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
</ul>
<pre><code># cd /home/dspacetest.cgiar.org/log
# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
@ -143,6 +172,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -151,8 +182,6 @@
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

59
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2019-02-01T21:37:30&#43;02:00"/> <meta property="og:updated_time" content="2019-03-01T12:16:30&#43;01:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-02-01T21:37:30&#43;02:00", "dateModified": "2019-03-01T12:16:30&#43;01:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,28 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-03-01">2019-03-01</h2>
<ul>
<li></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
@ -396,35 +418,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-05-01">2018-05-01</h2>
<ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
<ul>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li>
</ul></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -449,6 +442,8 @@ sys 2m7.289s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -457,8 +452,6 @@ sys 2m7.289s
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

15
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@ -6,11 +6,24 @@
<description>Recent content in Posts on CGSpace Notes</description> <description>Recent content in Posts on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
<lastBuildDate>Fri, 01 Feb 2019 21:37:30 +0200</lastBuildDate> <lastBuildDate>Fri, 01 Mar 2019 12:16:30 +0100</lastBuildDate>
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<item>
<title>March, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-03/</link>
<pubDate>Fri, 01 Mar 2019 12:16:30 +0100</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-03/</guid>
<description>&lt;h2 id=&#34;2019-03-01&#34;&gt;2019-03-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item> <item>
<title>February, 2019</title> <title>February, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-02/</link> <link>https://alanorth.github.io/cgspace-notes/2019-02/</link>

77
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2018-04-01T16:13:54&#43;02:00"/> <meta property="og:updated_time" content="2018-05-01T16:43:54&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2018-04-01T16:13:54&#43;02:00", "dateModified": "2018-05-01T16:43:54&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-05-01">2018-05-01</h2>
<ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
<ul>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li>
</ul></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
@ -396,46 +425,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-08-01">2017-08-01</h2>
<ul>
<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
<li>This means our Tomcat Crawler Session Valve is working</li>
<li>But many of the bots are browsing dynamic URLs like:
<ul>
<li>/handle/10568/3353/discover</li>
<li>/handle/10568/16510/browse</li>
</ul></li>
<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
<li>It turns out that we&rsquo;re already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/posts/" rel="prev" role="button">Previous page</a>
@ -460,6 +449,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -468,8 +459,6 @@ COPY 54701
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

80
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2017-07-01T18:03:52&#43;03:00"/> <meta property="og:updated_time" content="2017-08-01T11:51:52&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-07-01T18:03:52&#43;03:00", "dateModified": "2017-08-01T11:51:52&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,46 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-08-01">2017-08-01</h2>
<ul>
<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
<li>This means our Tomcat Crawler Session Valve is working</li>
<li>But many of the bots are browsing dynamic URLs like:
<ul>
<li>/handle/10568/3353/discover</li>
<li>/handle/10568/16510/browse</li>
</ul></li>
<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
<li>It turns out that we&rsquo;re already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
@ -352,38 +392,6 @@ DELETE 1
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-10-03">2016-10-03</h2>
<ul>
<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Need to test the following scenarios to see how author order is affected:
<ul>
<li>ORCIDs only</li>
<li>ORCIDs plus normal authors</li>
</ul></li>
<li>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
</ul>
<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/2/" rel="prev" role="button">Previous page</a>
@ -408,6 +416,8 @@ DELETE 1
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -416,8 +426,6 @@ DELETE 1
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

69
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2016-09-01T15:53:00&#43;03:00"/> <meta property="og:updated_time" content="2016-10-03T15:53:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2016-09-01T15:53:00&#43;03:00", "dateModified": "2016-10-03T15:53:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,38 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-10-03">2016-10-03</h2>
<ul>
<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Need to test the following scenarios to see how author order is affected:
<ul>
<li>ORCIDs only</li>
<li>ORCIDs plus normal authors</li>
</ul></li>
<li>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
</ul>
<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
@ -346,35 +378,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-12-02">2015-12-02</h2>
<ul>
<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
</ul>
<pre><code># cd /home/dspacetest.cgiar.org/log
# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/3/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/3/" rel="prev" role="button">Previous page</a>
@ -399,6 +402,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -407,8 +412,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

37
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2015-11-23T17:00:57&#43;03:00"/> <meta property="og:updated_time" content="2015-12-02T13:18:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2015-11-23T17:00:57&#43;03:00", "dateModified": "2015-12-02T13:18:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-12-02">2015-12-02</h2>
<ul>
<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
</ul>
<pre><code># cd /home/dspacetest.cgiar.org/log
# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
@ -143,6 +172,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -151,8 +182,6 @@
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

1
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@ -1,6 +1,7 @@
User-agent: * User-agent: *
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Disallow: /cgspace-notes/2019-02/ Disallow: /cgspace-notes/2019-02/
Disallow: /cgspace-notes/2019-01/ Disallow: /cgspace-notes/2019-01/
Disallow: /cgspace-notes/2018-12/ Disallow: /cgspace-notes/2018-12/

15
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@ -2,9 +2,14 @@
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xmlns:xhtml="http://www.w3.org/1999/xhtml"> xmlns:xhtml="http://www.w3.org/1999/xhtml">
<url>
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<lastmod>2019-03-01T12:17:01+01:00</lastmod>
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<url> <url>
@ -209,7 +214,7 @@
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/</loc> <loc>https://alanorth.github.io/cgspace-notes/</loc>
<lastmod>2019-02-28T08:20:19-08:00</lastmod> <lastmod>2019-03-01T12:17:01+01:00</lastmod>
<priority>0</priority> <priority>0</priority>
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@ -220,7 +225,7 @@
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc> <loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
<lastmod>2019-02-28T08:20:19-08:00</lastmod> <lastmod>2019-03-01T12:17:01+01:00</lastmod>
<priority>0</priority> <priority>0</priority>
</url> </url>
@ -232,13 +237,13 @@
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc> <loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
<lastmod>2019-02-28T08:20:19-08:00</lastmod> <lastmod>2019-03-01T12:17:01+01:00</lastmod>
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<lastmod>2019-02-28T08:20:19-08:00</lastmod> <lastmod>2019-03-01T12:17:01+01:00</lastmod>
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59
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2019-02-01T21:37:30&#43;02:00"/> <meta property="og:updated_time" content="2019-03-01T12:16:30&#43;01:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
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"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,28 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-03-01">2019-03-01</h2>
<ul>
<li></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
@ -396,35 +418,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-05-01">2018-05-01</h2>
<ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
<ul>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li>
</ul></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -449,6 +442,8 @@ sys 2m7.289s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -457,8 +452,6 @@ sys 2m7.289s
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

4
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@ -6,7 +6,7 @@
<description>Recent content in Tags on CGSpace Notes</description> <description>Recent content in Tags on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
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@ -14,7 +14,7 @@
<item> <item>
<title>Notes</title> <title>Notes</title>
<link>https://alanorth.github.io/cgspace-notes/tags/notes/</link> <link>https://alanorth.github.io/cgspace-notes/tags/notes/</link>
<pubDate>Fri, 01 Feb 2019 21:37:30 +0200</pubDate> <pubDate>Fri, 01 Mar 2019 12:16:30 +0100</pubDate>
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<description></description> <description></description>

57
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
<meta property="og:updated_time" content="2019-02-01T21:37:30&#43;02:00"/> <meta property="og:updated_time" content="2019-03-01T12:16:30&#43;01:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -77,6 +77,28 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-03-01">2019-03-01</h2>
<ul>
<li></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
@ -381,35 +403,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-05-01">2018-05-01</h2>
<ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
<ul>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li>
</ul></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -434,6 +427,8 @@ sys 2m7.289s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -442,8 +437,6 @@ sys 2m7.289s
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

15
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@ -6,11 +6,24 @@
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<pubDate>Fri, 01 Mar 2019 12:16:30 +0100</pubDate>
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&lt;ul&gt;
&lt;li&gt;&lt;/li&gt;
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<item> <item>
<title>February, 2019</title> <title>February, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-02/</link> <link>https://alanorth.github.io/cgspace-notes/2019-02/</link>

65
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@ -10,7 +10,7 @@
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<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -77,6 +77,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-05-01">2018-05-01</h2>
<ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
<ul>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li>
</ul></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
@ -403,36 +432,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-07-01T18:03:52&#43;03:00">Sat Jul 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-07-01">2017-07-01</h2>
<ul>
<li>Run system updates and reboot DSpace Test</li>
</ul>
<h2 id="2017-07-04">2017-07-04</h2>
<ul>
<li>Merge changes for WLE Phase II theme rename (<a href="https://github.com/ilri/DSpace/pull/329">#329</a>)</li>
<li>Looking at extracting the metadata registries from ICARDA&rsquo;s MEL DSpace database so we can compare fields with CGSpace</li>
<li>We can use PostgreSQL&rsquo;s extended output format (<code>-x</code>) plus <code>sed</code> to format the output into quasi XML:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-07/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/" rel="prev" role="button">Previous page</a>
@ -457,6 +456,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -465,8 +466,6 @@ COPY 54701
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

64
docs/tags/notes/page/3/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
<meta property="og:updated_time" content="2017-06-01T10:14:52&#43;03:00"/> <meta property="og:updated_time" content="2017-07-01T18:03:52&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -77,6 +77,36 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-07-01T18:03:52&#43;03:00">Sat Jul 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-07-01">2017-07-01</h2>
<ul>
<li>Run system updates and reboot DSpace Test</li>
</ul>
<h2 id="2017-07-04">2017-07-04</h2>
<ul>
<li>Merge changes for WLE Phase II theme rename (<a href="https://github.com/ilri/DSpace/pull/329">#329</a>)</li>
<li>Looking at extracting the metadata registries from ICARDA&rsquo;s MEL DSpace database so we can compare fields with CGSpace</li>
<li>We can use PostgreSQL&rsquo;s extended output format (<code>-x</code>) plus <code>sed</code> to format the output into quasi XML:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-07/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
@ -339,34 +369,6 @@ DELETE 1
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-09-01T15:53:00&#43;03:00">Thu Sep 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-09-01">2016-09-01</h2>
<ul>
<li>Discuss helping CCAFS with some batch tagging of ORCID IDs for their authors</li>
<li>Discuss how the migration of CGIAR&rsquo;s Active Directory to a flat structure will break our LDAP groups in DSpace</li>
<li>We had been using <code>DC=ILRI</code> to determine whether a user was ILRI or not</li>
<li>It looks like we might be able to use OUs now, instead of DCs:</li>
</ul>
<pre><code>$ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b &quot;dc=cgiarad,dc=org&quot; -D &quot;admigration1@cgiarad.org&quot; -W &quot;(sAMAccountName=admigration1)&quot;
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2016-09/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/page/2/" rel="prev" role="button">Previous page</a>
@ -391,6 +393,8 @@ DELETE 1
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -399,8 +403,6 @@ DELETE 1
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

66
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View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
<meta property="og:updated_time" content="2016-08-01T15:53:00&#43;03:00"/> <meta property="og:updated_time" content="2016-09-01T15:53:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -77,6 +77,34 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-09-01T15:53:00&#43;03:00">Thu Sep 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-09-01">2016-09-01</h2>
<ul>
<li>Discuss helping CCAFS with some batch tagging of ORCID IDs for their authors</li>
<li>Discuss how the migration of CGIAR&rsquo;s Active Directory to a flat structure will break our LDAP groups in DSpace</li>
<li>We had been using <code>DC=ILRI</code> to determine whether a user was ILRI or not</li>
<li>It looks like we might be able to use OUs now, instead of DCs:</li>
</ul>
<pre><code>$ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b &quot;dc=cgiarad,dc=org&quot; -D &quot;admigration1@cgiarad.org&quot; -W &quot;(sAMAccountName=admigration1)&quot;
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2016-09/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
@ -332,39 +360,11 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-11-23T17:00:57&#43;03:00">Mon Nov 23, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-11-22">2015-11-22</h2>
<ul>
<li>CGSpace went down</li>
<li>Looks like DSpace exhausted its PostgreSQL connection pool</li>
<li>Last week I had increased the limit from 30 to 60, which seemed to help, but now there are many more idle connections:</li>
</ul>
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
78
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2015-11/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/page/3/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/page/3/" rel="prev" role="button">Previous page</a>
<a class="btn btn-outline-primary disabled" href="#" role="button" aria-disabled="true">Next page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/notes/page/5/" rel="next" role="button">Next page</a>
</nav> </nav>
@ -384,6 +384,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -392,8 +394,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

182
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@ -0,0 +1,182 @@
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<head>
<meta charset="utf-8">
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<div class="container">
<h1 class="blog-title"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
<p class="lead blog-description">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
</div>
</header>
<div class="container">
<div class="row">
<div class="col-sm-8 blog-main">
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-11-23T17:00:57&#43;03:00">Mon Nov 23, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-11-22">2015-11-22</h2>
<ul>
<li>CGSpace went down</li>
<li>Looks like DSpace exhausted its PostgreSQL connection pool</li>
<li>Last week I had increased the limit from 30 to 60, which seemed to help, but now there are many more idle connections:</li>
</ul>
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
78
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2015-11/'>Read more →</a>
</article>
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<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
<li><a href="/cgspace-notes/2018-12/">December, 2018</a></li>
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
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<section class="sidebar-module">
<h4>Links</h4>
<ol class="list-unstyled">
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2018-04-01T16:13:54&#43;02:00"/> <meta property="og:updated_time" content="2018-05-01T16:43:54&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2018-04-01T16:13:54&#43;02:00", "dateModified": "2018-05-01T16:43:54&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-05-01">2018-05-01</h2>
<ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
<ul>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li>
</ul></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
@ -396,46 +425,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-08-01">2017-08-01</h2>
<ul>
<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
<li>This means our Tomcat Crawler Session Valve is working</li>
<li>But many of the bots are browsing dynamic URLs like:
<ul>
<li>/handle/10568/3353/discover</li>
<li>/handle/10568/16510/browse</li>
</ul></li>
<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
<li>It turns out that we&rsquo;re already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/" rel="prev" role="button">Previous page</a>
@ -460,6 +449,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -468,8 +459,6 @@ COPY 54701
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

80
docs/tags/page/3/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2017-07-01T18:03:52&#43;03:00"/> <meta property="og:updated_time" content="2017-08-01T11:51:52&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-07-01T18:03:52&#43;03:00", "dateModified": "2017-08-01T11:51:52&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,46 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-08-01">2017-08-01</h2>
<ul>
<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
<li>This means our Tomcat Crawler Session Valve is working</li>
<li>But many of the bots are browsing dynamic URLs like:
<ul>
<li>/handle/10568/3353/discover</li>
<li>/handle/10568/16510/browse</li>
</ul></li>
<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
<li>It turns out that we&rsquo;re already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
@ -352,38 +392,6 @@ DELETE 1
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-10-03">2016-10-03</h2>
<ul>
<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Need to test the following scenarios to see how author order is affected:
<ul>
<li>ORCIDs only</li>
<li>ORCIDs plus normal authors</li>
</ul></li>
<li>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
</ul>
<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/2/" rel="prev" role="button">Previous page</a>
@ -408,6 +416,8 @@ DELETE 1
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -416,8 +426,6 @@ DELETE 1
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

69
docs/tags/page/4/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2016-09-01T15:53:00&#43;03:00"/> <meta property="og:updated_time" content="2016-10-03T15:53:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2016-09-01T15:53:00&#43;03:00", "dateModified": "2016-10-03T15:53:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,38 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-10-03">2016-10-03</h2>
<ul>
<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Need to test the following scenarios to see how author order is affected:
<ul>
<li>ORCIDs only</li>
<li>ORCIDs plus normal authors</li>
</ul></li>
<li>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
</ul>
<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
@ -346,35 +378,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-12-02">2015-12-02</h2>
<ul>
<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
</ul>
<pre><code># cd /home/dspacetest.cgiar.org/log
# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/3/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/3/" rel="prev" role="button">Previous page</a>
@ -399,6 +402,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -407,8 +412,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>

37
docs/tags/page/5/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2015-11-23T17:00:57&#43;03:00"/> <meta property="og:updated_time" content="2015-12-02T13:18:00&#43;03:00"/>
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -29,7 +29,7 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2015-11-23T17:00:57&#43;03:00", "dateModified": "2015-12-02T13:18:00&#43;03:00",
"keywords": "notes,notes,", "keywords": "notes,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
} }
@ -92,6 +92,35 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-12-02">2015-12-02</h2>
<ul>
<li>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</li>
</ul>
<pre><code># cd /home/dspacetest.cgiar.org/log
# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
</code></pre>
<a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2> <h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
@ -143,6 +172,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/2019-03/">March, 2019</a></li>
<li><a href="/cgspace-notes/2019-02/">February, 2019</a></li> <li><a href="/cgspace-notes/2019-02/">February, 2019</a></li>
<li><a href="/cgspace-notes/2019-01/">January, 2019</a></li> <li><a href="/cgspace-notes/2019-01/">January, 2019</a></li>
@ -151,8 +182,6 @@
<li><a href="/cgspace-notes/2018-11/">November, 2018</a></li> <li><a href="/cgspace-notes/2018-11/">November, 2018</a></li>
<li><a href="/cgspace-notes/2018-10/">October, 2018</a></li>
</ol> </ol>
</section> </section>