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Add notes for 2020-01-14
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@ -1,6 +1,6 @@
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---
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title: "January, 2020"
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date: 2019-01-06T10:48:30+02:00
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date: 2020-01-06T10:48:30+02:00
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author: "Alan Orth"
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categories: ["Notes"]
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---
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@ -53,7 +53,7 @@ $ sed -n '5227p' /tmp/2020-01-08-authors.csv | xxd -c1
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00000007: 72 r
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```
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- According to the blog post linked above the troublesome character is probably the "High Octect Preset" (81), which vim identifies (using `ga` on the character) as:
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- ~~According to the blog post linked above the troublesome character is probably the "High Octect Preset" (81)~~, which vim identifies (using `ga` on the character) as:
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```
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<e> 101, Hex 65, Octal 145 < ́> 769, Hex 0301, Octal 1401
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@ -65,4 +65,32 @@ $ sed -n '5227p' /tmp/2020-01-08-authors.csv | xxd -c1
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- I think the solution is to upload it to Google Docs, or just send it to him and deal with each case manually in the corrections he sends me
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- Re-deploy DSpace Test (linode19) with a fresh snapshot of the CGSpace database and assetstore, and using the `5_x-prod` (no CG Core v2) branch
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## 2020-01-14
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- I checked the yearly Solr statistics sharding cron job that should have run on 2020-01 on CGSpace (linode18) and saw that there was an error
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- I manually ran it on the server as the DSpace user and it said "Moving: 51633080 into core statistics-2019"
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- After a few hours it died with the same error that I had seen in the log from the first run:
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```
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Exception: Read timed out
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java.net.SocketTimeoutException: Read timed out
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```
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- I am not sure how I will fix that shard...
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- I discovered a very interesting tool called [ftfy](https://github.com/LuminosoInsight/python-ftfy) that attempts to fix errors in UTF-8
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- I'm curious to start checking input files with this to see what it highlights
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- I ran it on the authors file from last week and it converted characters like those with Spanish accents from multi-byte sequences (I don't know what it's called?) to digraphs (é→é), which vim identifies as:
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- `<e> 101, Hex 65, Octal 145 < ́> 769, Hex 0301, Octal 1401`
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- `<é> 233, Hex 00e9, Oct 351, Digr e'`
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- Ah hah! We need to be [normalizing characters into their canonical forms](https://withblue.ink/2019/03/11/why-you-need-to-normalize-unicode-strings.html)!
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- In Python 3.8 we can even [check if the string is normalized using the `unicodedata` library](https://docs.python.org/3/library/unicodedata.html):
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```
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In [7]: unicodedata.is_normalized('NFC', 'é')
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Out[7]: False
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In [8]: unicodedata.is_normalized('NFC', 'é')
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Out[8]: True
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```
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<!-- vim: set sw=2 ts=2: -->
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@ -31,7 +31,7 @@ Last week I had increased the limit from 30 to 60, which seemed to help, but now
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$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
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78
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"/>
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<meta name="generator" content="Hugo 0.62.2" />
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@ -234,6 +234,8 @@ db.statementpool = true
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -242,8 +244,6 @@ db.statementpool = true
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -33,7 +33,7 @@ Replace lzop with xz in log compression cron jobs on DSpace Test—it uses less
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-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
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-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
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"/>
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<meta name="generator" content="Hugo 0.62.0" />
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<meta name="generator" content="Hugo 0.62.2" />
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@ -256,6 +256,8 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -264,8 +266,6 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -25,7 +25,7 @@ Move ILRI collection 10568/12503 from 10568/27869 to 10568/27629 using the move_
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I realized it is only necessary to clear the Cocoon cache after moving collections—rather than reindexing—as no metadata has changed, and therefore no search or browse indexes need to be updated.
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Update GitHub wiki for documentation of maintenance tasks.
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"/>
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<meta name="generator" content="Hugo 0.62.0" />
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<meta name="generator" content="Hugo 0.62.2" />
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@ -192,6 +192,8 @@ $ find SimpleArchiveForBio/ -iname “*.pdf” -exec basename {} ; | sor
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -200,8 +202,6 @@ $ find SimpleArchiveForBio/ -iname “*.pdf” -exec basename {} ; | sor
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -35,7 +35,7 @@ I noticed we have a very interesting list of countries on CGSpace:
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Not only are there 49,000 countries, we have some blanks (25)…
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Also, lots of things like “COTE D`LVOIRE” and “COTE D IVOIRE”
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"/>
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<meta name="generator" content="Hugo 0.62.0" />
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<meta name="generator" content="Hugo 0.62.2" />
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@ -370,6 +370,8 @@ Bitstream: tést señora alimentación.pdf
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -378,8 +380,6 @@ Bitstream: tést señora alimentación.pdf
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -25,7 +25,7 @@ Looking at issues with author authorities on CGSpace
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For some reason we still have the index-lucene-update cron job active on CGSpace, but I'm pretty sure we don't need it as of the latest few versions of Atmire's Listings and Reports module
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Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Java JDK 1.7 to match environment on CGSpace server
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"/>
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<meta name="generator" content="Hugo 0.62.0" />
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<meta name="generator" content="Hugo 0.62.2" />
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@ -308,6 +308,8 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -316,8 +318,6 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -29,7 +29,7 @@ After running DSpace for over five years I've never needed to look in any ot
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This will save us a few gigs of backup space we're paying for on S3
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Also, I noticed the checker log has some errors we should pay attention to:
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"/>
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<meta name="generator" content="Hugo 0.62.0" />
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<meta name="generator" content="Hugo 0.62.2" />
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@ -487,6 +487,8 @@ dspace.log.2016-04-27:7271
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -495,8 +497,6 @@ dspace.log.2016-04-27:7271
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -31,7 +31,7 @@ There are 3,000 IPs accessing the REST API in a 24-hour period!
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# awk '{print $1}' /var/log/nginx/rest.log | uniq | wc -l
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3168
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"/>
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<meta name="generator" content="Hugo 0.62.2" />
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@ -363,6 +363,8 @@ sys 0m20.540s
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -371,8 +373,6 @@ sys 0m20.540s
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -31,7 +31,7 @@ This is their publications set: http://ebrary.ifpri.org/oai/oai.php?verb=ListRec
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You can see the others by using the OAI ListSets verb: http://ebrary.ifpri.org/oai/oai.php?verb=ListSets
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Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in dc.identifier.fund to cg.identifier.cpwfproject and then the rest to dc.description.sponsorship
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"/>
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<meta name="generator" content="Hugo 0.62.2" />
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@ -401,6 +401,8 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -409,8 +411,6 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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In this case the select query was showing 95 results before the update
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"/>
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<meta name="generator" content="Hugo 0.62.2" />
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@ -317,6 +317,8 @@ discovery.index.authority.ignore-variants=true
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -325,8 +327,6 @@ discovery.index.authority.ignore-variants=true
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -39,7 +39,7 @@ $ git checkout -b 55new 5_x-prod
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$ git reset --hard ilri/5_x-prod
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$ git rebase -i dspace-5.5
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"/>
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<meta name="generator" content="Hugo 0.62.0" />
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<meta name="generator" content="Hugo 0.62.2" />
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@ -381,6 +381,8 @@ $ JAVA_OPTS="-Dfile.encoding=UTF-8 -Xmx512m" /home/cgspace.cgiar.org/b
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -389,8 +391,6 @@ $ JAVA_OPTS="-Dfile.encoding=UTF-8 -Xmx512m" /home/cgspace.cgiar.org/b
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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$ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b "dc=cgiarad,dc=org" -D "admigration1@cgiarad.org" -W "(sAMAccountName=admigration1)"
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"/>
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<meta name="generator" content="Hugo 0.62.0" />
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<meta name="generator" content="Hugo 0.62.2" />
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@ -598,6 +598,8 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -606,8 +608,6 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -39,7 +39,7 @@ I exported a random item's metadata as CSV, deleted all columns except id an
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0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
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"/>
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<meta name="generator" content="Hugo 0.62.0" />
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<meta name="generator" content="Hugo 0.62.2" />
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@ -364,6 +364,8 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -372,8 +374,6 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -23,7 +23,7 @@ Add dc.type to the output options for Atmire's Listings and Reports module (
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Add dc.type to the output options for Atmire's Listings and Reports module (#286)
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"/>
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<meta name="generator" content="Hugo 0.62.2" />
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@ -540,6 +540,8 @@ org.dspace.discovery.SearchServiceException: Error executing query
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<ol class="list-unstyled">
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<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
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<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
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<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
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@ -548,8 +550,6 @@ org.dspace.discovery.SearchServiceException: Error executing query
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
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</ol>
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</section>
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@ -43,7 +43,7 @@ I see thousands of them in the logs for the last few months, so it's not rel
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I've raised a ticket with Atmire to ask
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Another worrying error from dspace.log is:
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"/>
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<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -776,6 +776,8 @@ $ exit
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -784,8 +786,6 @@ $ exit
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -25,7 +25,7 @@ I checked to see if the Solr sharding task that is supposed to run on January 1s
|
||||
I tested on DSpace Test as well and it doesn't work there either
|
||||
I asked on the dspace-tech mailing list because it seems to be broken, and actually now I'm not sure if we've ever had the sharding task run successfully over all these years
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -361,6 +361,8 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -369,8 +371,6 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -47,7 +47,7 @@ DELETE 1
|
||||
Create issue on GitHub to track the addition of CCAFS Phase II project tags (#301)
|
||||
Looks like we'll be using cg.identifier.ccafsprojectpii as the field name
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -416,6 +416,8 @@ COPY 1968
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -424,8 +426,6 @@ COPY 1968
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -51,7 +51,7 @@ Interestingly, it seems DSpace 4.x's thumbnails were sRGB, but forcing regen
|
||||
$ identify ~/Desktop/alc_contrastes_desafios.jpg
|
||||
/Users/aorth/Desktop/alc_contrastes_desafios.jpg JPEG 464x600 464x600+0+0 8-bit CMYK 168KB 0.000u 0:00.000
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -347,6 +347,8 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -355,8 +357,6 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -37,7 +37,7 @@ Testing the CMYK patch on a collection with 650 items:
|
||||
|
||||
$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p "ImageMagick PDF Thumbnail" -v >& /tmp/filter-media-cmyk.txt
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -577,6 +577,8 @@ $ gem install compass -v 1.0.3
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -585,8 +587,6 @@ $ gem install compass -v 1.0.3
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -15,7 +15,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="May, 2017"/>
|
||||
<meta name="twitter:description" content="2017-05-01 ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items: https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683 2017-05-02 Atmire got back about the Workflow Statistics issue, and apparently it's a bug in the CUA module so they will send us a pull request 2017-05-04 Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire's CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -383,6 +383,8 @@ UPDATE 187
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -391,8 +393,6 @@ UPDATE 187
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -15,7 +15,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="June, 2017"/>
|
||||
<meta name="twitter:description" content="2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we'll create a new sub-community for Phase II and create collections for the research themes there The current “Research Themes” community will be renamed to “WLE Phase I Research Themes” Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -262,6 +262,8 @@ $ JAVA_OPTS="-Xmx1024m -Dfile.encoding=UTF-8" [dspace]/bin/dspace impo
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -270,8 +272,6 @@ $ JAVA_OPTS="-Xmx1024m -Dfile.encoding=UTF-8" [dspace]/bin/dspace impo
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -33,7 +33,7 @@ Merge changes for WLE Phase II theme rename (#329)
|
||||
Looking at extracting the metadata registries from ICARDA's MEL DSpace database so we can compare fields with CGSpace
|
||||
We can use PostgreSQL's extended output format (-x) plus sed to format the output into quasi XML:
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -267,6 +267,8 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -275,8 +277,6 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -57,7 +57,7 @@ This was due to newline characters in the dc.description.abstract column, which
|
||||
I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using g/^$/d
|
||||
Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -509,6 +509,8 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -517,8 +519,6 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -29,7 +29,7 @@ Linode sent an alert that CGSpace (linode18) was using 261% CPU for the past two
|
||||
|
||||
Ask Sisay to clean up the WLE approvers a bit, as Marianne's user account is both in the approvers step as well as the group
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -651,6 +651,8 @@ Cert Status: good
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -659,8 +661,6 @@ Cert Status: good
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -31,7 +31,7 @@ http://hdl.handle.net/10568/78495||http://hdl.handle.net/10568/79336
|
||||
There appears to be a pattern but I'll have to look a bit closer and try to clean them up automatically, either in SQL or in OpenRefine
|
||||
Add Katherine Lutz to the groups for content submission and edit steps of the CGIAR System collections
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -435,6 +435,8 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -443,8 +445,6 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -45,7 +45,7 @@ Generate list of authors on CGSpace for Peter to go through and correct:
|
||||
dspace=# \copy (select distinct text_value, count(*) as count from metadatavalue where metadata_field_id = (select metadata_field_id from metadatafieldregistry where element = 'contributor' and qualifier = 'author') AND resource_type_id = 2 group by text_value order by count desc) to /tmp/authors.csv with csv;
|
||||
COPY 54701
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -936,6 +936,8 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -944,8 +946,6 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -27,7 +27,7 @@ The logs say “Timeout waiting for idle object”
|
||||
PostgreSQL activity says there are 115 connections currently
|
||||
The list of connections to XMLUI and REST API for today:
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -775,6 +775,8 @@ DELETE 20
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -783,8 +785,6 @@ DELETE 20
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -147,7 +147,7 @@ dspace.log.2018-01-02:34
|
||||
|
||||
Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let's Encrypt if it's just a handful of domains
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -1444,6 +1444,8 @@ Catalina:type=Manager,context=/,host=localhost activeSessions 8
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -1452,8 +1454,6 @@ Catalina:type=Manager,context=/,host=localhost activeSessions 8
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -27,7 +27,7 @@ We don't need to distinguish between internal and external works, so that ma
|
||||
Yesterday I figured out how to monitor DSpace sessions using JMX
|
||||
I copied the logic in the jmx_tomcat_dbpools provided by Ubuntu's munin-plugins-java package and used the stuff I discovered about JMX in 2018-01
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -1031,6 +1031,8 @@ UPDATE 3
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -1039,8 +1041,6 @@ UPDATE 3
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -21,7 +21,7 @@ Export a CSV of the IITA community metadata for Martin Mueller
|
||||
|
||||
Export a CSV of the IITA community metadata for Martin Mueller
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -577,6 +577,8 @@ Fixed 5 occurences of: GENEBANKS
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -585,8 +587,6 @@ Fixed 5 occurences of: GENEBANKS
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -23,7 +23,7 @@ Catalina logs at least show some memory errors yesterday:
|
||||
I tried to test something on DSpace Test but noticed that it's down since god knows when
|
||||
Catalina logs at least show some memory errors yesterday:
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -586,6 +586,8 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -594,8 +596,6 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -35,7 +35,7 @@ http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E
|
||||
Then I reduced the JVM heap size from 6144 back to 5120m
|
||||
Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the Ansible infrastructure scripts to support hosts choosing which distribution they want to use
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -515,6 +515,8 @@ $ psql -h localhost -U postgres dspacetest
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -523,8 +525,6 @@ $ psql -h localhost -U postgres dspacetest
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -55,7 +55,7 @@ real 74m42.646s
|
||||
user 8m5.056s
|
||||
sys 2m7.289s
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -506,6 +506,8 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 > map-to-cifor-archive.csv
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -514,8 +516,6 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 > map-to-cifor-archive.csv
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -33,7 +33,7 @@ During the mvn package stage on the 5.8 branch I kept getting issues with java r
|
||||
|
||||
There is insufficient memory for the Java Runtime Environment to continue.
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -561,6 +561,8 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -569,8 +571,6 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -43,7 +43,7 @@ Anyways, perhaps I should increase the JVM heap from 5120m to 6144m like we did
|
||||
The server only has 8GB of RAM so we'll eventually need to upgrade to a larger one because we'll start starving the OS, PostgreSQL, and command line batch processes
|
||||
I ran all system updates on DSpace Test and rebooted it
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -434,6 +434,8 @@ $ dspace database migrate ignored
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -442,8 +444,6 @@ $ dspace database migrate ignored
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -27,7 +27,7 @@ I'll update the DSpace role in our Ansible infrastructure playbooks and run
|
||||
Also, I'll re-run the postgresql tasks because the custom PostgreSQL variables are dynamic according to the system's RAM, and we never re-ran them after migrating to larger Linodes last month
|
||||
I'm testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I'm getting those autowire errors in Tomcat 8.5.30 again:
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -740,6 +740,8 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -748,8 +750,6 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -23,7 +23,7 @@ I created a GitHub issue to track this #389, because I'm super busy in Nairo
|
||||
Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items
|
||||
I created a GitHub issue to track this #389, because I'm super busy in Nairobi right now
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -649,6 +649,8 @@ $ curl -X GET -H "Content-Type: application/json" -H "Accept: app
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -657,8 +659,6 @@ $ curl -X GET -H "Content-Type: application/json" -H "Accept: app
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -33,7 +33,7 @@ Send a note about my dspace-statistics-api to the dspace-tech mailing list
|
||||
Linode has been sending mails a few times a day recently that CGSpace (linode18) has had high CPU usage
|
||||
Today these are the top 10 IPs:
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -545,6 +545,8 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -553,8 +555,6 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -33,7 +33,7 @@ Then I ran all system updates and restarted the server
|
||||
|
||||
I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another Ghostscript vulnerability last week
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -586,6 +586,8 @@ UPDATE 1
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -594,8 +596,6 @@ UPDATE 1
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -47,7 +47,7 @@ I don't see anything interesting in the web server logs around that time tho
|
||||
357 207.46.13.1
|
||||
903 54.70.40.11
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -1256,6 +1256,8 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -1264,8 +1266,6 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -69,7 +69,7 @@ real 0m19.873s
|
||||
user 0m22.203s
|
||||
sys 0m1.979s
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -1336,6 +1336,8 @@ Please see the DSpace documentation for assistance.
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -1344,8 +1346,6 @@ Please see the DSpace documentation for assistance.
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -43,7 +43,7 @@ Most worryingly, there are encoding errors in the abstracts for eleven items, fo
|
||||
|
||||
I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -1200,6 +1200,8 @@ sys 0m2.551s
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -1208,8 +1210,6 @@ sys 0m2.551s
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -61,7 +61,7 @@ $ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u ds
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -1291,6 +1291,8 @@ UPDATE 14
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -1299,8 +1301,6 @@ UPDATE 14
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -45,7 +45,7 @@ DELETE 1
|
||||
|
||||
But after this I tried to delete the item from the XMLUI and it is still present…
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -623,6 +623,8 @@ COPY 64871
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -631,8 +633,6 @@ COPY 64871
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -31,7 +31,7 @@ Run system updates on CGSpace (linode18) and reboot it
|
||||
|
||||
Skype with Marie-Angélique and Abenet about CG Core v2
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -309,6 +309,8 @@ UPDATE 2
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -317,8 +319,6 @@ UPDATE 2
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -35,7 +35,7 @@ CGSpace
|
||||
|
||||
Abenet had another similar issue a few days ago when trying to find the stats for 2018 in the RTB community
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -546,6 +546,8 @@ issn.validate('1020-3362')
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -554,8 +556,6 @@ issn.validate('1020-3362')
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -43,7 +43,7 @@ After rebooting, all statistics cores were loaded… wow, that's lucky.
|
||||
|
||||
Run system updates on DSpace Test (linode19) and reboot it
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -565,6 +565,8 @@ sys 2m27.496s
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -573,8 +575,6 @@ sys 2m27.496s
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -69,7 +69,7 @@ Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning:
|
||||
7249 2a01:7e00::f03c:91ff:fe18:7396
|
||||
9124 45.5.186.2
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -573,6 +573,8 @@ $ csv-metadata-quality -i /tmp/clarisa-institutions.csv -o /tmp/clarisa-institut
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -581,8 +583,6 @@ $ csv-metadata-quality -i /tmp/clarisa-institutions.csv -o /tmp/clarisa-institut
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -15,7 +15,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="October, 2019"/>
|
||||
<meta name="twitter:description" content="2019-10-01 Udana from IWMI asked me for a CSV export of their community on CGSpace I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script's “unneccesary Unicode” fix: $ csvcut -c 'id,dc."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -377,6 +377,8 @@ $ dspace import -a -c 10568/104057 -e fuu@cgiar.org -m 2019-10-15-Bioversity.map
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -385,8 +387,6 @@ $ dspace import -a -c 10568/104057 -e fuu@cgiar.org -m 2019-10-15-Bioversity.map
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -55,7 +55,7 @@ Let's see how many of the REST API requests were for bitstreams (because the
|
||||
# zcat --force /var/log/nginx/rest.log.*.gz | grep -E "[0-9]{1,2}/Oct/2019" | grep -c -E "/rest/bitstreams"
|
||||
106781
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -684,6 +684,8 @@ $ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-i
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -692,8 +694,6 @@ $ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-i
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -43,7 +43,7 @@ Make sure all packages are up to date and the package manager is up to date, the
|
||||
# dpkg -C
|
||||
# reboot
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -396,6 +396,8 @@ UPDATE 1
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -404,8 +406,6 @@ UPDATE 1
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
297
docs/2020-01/index.html
Normal file
297
docs/2020-01/index.html
Normal file
@ -0,0 +1,297 @@
|
||||
<!DOCTYPE html>
|
||||
<html lang="en" >
|
||||
|
||||
<head>
|
||||
<meta charset="utf-8">
|
||||
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
|
||||
|
||||
<meta property="og:title" content="January, 2020" />
|
||||
<meta property="og:description" content="2020-01-06
|
||||
|
||||
Open a ticket with Atmire to request a quote for the upgrade to DSpace 6
|
||||
Last week Altmetric responded about the item that had a lower score than than its DOI
|
||||
|
||||
The score is now linked to the DOI
|
||||
Another item that had the same problem in 2019 has now also linked to the score for its DOI
|
||||
Another item that had the same problem in 2019 has also been fixed
|
||||
|
||||
|
||||
|
||||
2020-01-07
|
||||
|
||||
Peter Ballantyne highlighted one more WLE item that is missing the Altmetric score that its DOI has
|
||||
|
||||
The DOI has a score of 259, but the Handle has no score at all
|
||||
I tweeted the CGSpace repository link
|
||||
|
||||
|
||||
" />
|
||||
<meta property="og:type" content="article" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2020-01/" />
|
||||
<meta property="article:published_time" content="2020-01-06T10:48:30+02:00" />
|
||||
<meta property="article:modified_time" content="2020-01-08T15:33:56+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="January, 2020"/>
|
||||
<meta name="twitter:description" content="2020-01-06
|
||||
|
||||
Open a ticket with Atmire to request a quote for the upgrade to DSpace 6
|
||||
Last week Altmetric responded about the item that had a lower score than than its DOI
|
||||
|
||||
The score is now linked to the DOI
|
||||
Another item that had the same problem in 2019 has now also linked to the score for its DOI
|
||||
Another item that had the same problem in 2019 has also been fixed
|
||||
|
||||
|
||||
|
||||
2020-01-07
|
||||
|
||||
Peter Ballantyne highlighted one more WLE item that is missing the Altmetric score that its DOI has
|
||||
|
||||
The DOI has a score of 259, but the Handle has no score at all
|
||||
I tweeted the CGSpace repository link
|
||||
|
||||
|
||||
"/>
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
<script type="application/ld+json">
|
||||
{
|
||||
"@context": "http://schema.org",
|
||||
"@type": "BlogPosting",
|
||||
"headline": "January, 2020",
|
||||
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2020-01\/",
|
||||
"wordCount": "617",
|
||||
"datePublished": "2020-01-06T10:48:30+02:00",
|
||||
"dateModified": "2020-01-08T15:33:56+02:00",
|
||||
"author": {
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"keywords": "Notes"
|
||||
}
|
||||
</script>
|
||||
|
||||
|
||||
|
||||
<link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2020-01/">
|
||||
|
||||
<title>January, 2020 | CGSpace Notes</title>
|
||||
|
||||
|
||||
<!-- combined, minified CSS -->
|
||||
<link href="https://alanorth.github.io/cgspace-notes/css/style.css" rel="stylesheet" integrity="sha384-G5B34w7DFTumWTswxYzTX7NWfbvQEg1HbFFEg6ItN03uTAAoS2qkPS/fu3LhuuSA" crossorigin="anonymous">
|
||||
|
||||
|
||||
<!-- RSS 2.0 feed -->
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
</head>
|
||||
|
||||
<body>
|
||||
|
||||
|
||||
<div class="blog-masthead">
|
||||
<div class="container">
|
||||
<nav class="nav blog-nav">
|
||||
<a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
|
||||
</nav>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
|
||||
|
||||
<header class="blog-header">
|
||||
<div class="container">
|
||||
<h1 class="blog-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
|
||||
<p class="lead blog-description" dir="auto">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
|
||||
</div>
|
||||
</header>
|
||||
|
||||
|
||||
|
||||
|
||||
<div class="container">
|
||||
<div class="row">
|
||||
<div class="col-sm-8 blog-main">
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2020-01-06T10:48:30+02:00">Mon Jan 06, 2020</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-08">2020-01-08</h2>
|
||||
<ul>
|
||||
<li>Export a list of authors from CGSpace for Peter Ballantyne to look through and correct:</li>
|
||||
</ul>
|
||||
<pre><code>dspace=# \COPY (SELECT DISTINCT text_value as "dc.contributor.author", count(*) FROM metadatavalue WHERE resource_type_id = 2 AND metadata_field_id = 3 GROUP BY text_value ORDER BY count DESC) to /tmp/2020-01-08-authors.csv WITH CSV HEADER;
|
||||
COPY 68790
|
||||
</code></pre><ul>
|
||||
<li>As I always have encoding issues with files Peter sends, I tried to convert it to some Windows encoding, but got an error:</li>
|
||||
</ul>
|
||||
<pre><code>$ iconv -f utf-8 -t windows-1252 /tmp/2020-01-08-authors.csv -o /tmp/2020-01-08-authors-windows.csv
|
||||
iconv: illegal input sequence at position 104779
|
||||
</code></pre><ul>
|
||||
<li>According to <a href="https://www.datafix.com.au/BASHing/2018-09-13.html">this trick</a> the troublesome character is on line 5227:</li>
|
||||
</ul>
|
||||
<pre><code>$ awk 'END {print NR": "$0}' /tmp/2020-01-08-authors-windows.csv
|
||||
5227: "Oue
|
||||
$ sed -n '5227p' /tmp/2020-01-08-authors.csv | xxd -c1
|
||||
00000000: 22 "
|
||||
00000001: 4f O
|
||||
00000002: 75 u
|
||||
00000003: 65 e
|
||||
00000004: cc .
|
||||
00000005: 81 .
|
||||
00000006: 64 d
|
||||
00000007: 72 r
|
||||
</code></pre><ul>
|
||||
<li><del>According to the blog post linked above the troublesome character is probably the “High Octect Preset” (81)</del>, which vim identifies (using <code>ga</code> on the character) as:</li>
|
||||
</ul>
|
||||
<pre><code><e> 101, Hex 65, Octal 145 < ́> 769, Hex 0301, Octal 1401
|
||||
</code></pre><ul>
|
||||
<li>If I understand the situation correctly it sounds like this means that the character is not actually encoded as UTF-8, so it's stored incorrectly in the database…</li>
|
||||
<li>Other encodings like <code>windows-1251</code> and <code>windows-1257</code> also fail on different characters like “ž” and “é” that <em>are</em> legitimate UTF-8 characters</li>
|
||||
<li>Then there is the issue of Russian, Chinese, etc characters, which are simply not representable in any of those encodings</li>
|
||||
<li>I think the solution is to upload it to Google Docs, or just send it to him and deal with each case manually in the corrections he sends me</li>
|
||||
<li>Re-deploy DSpace Test (linode19) with a fresh snapshot of the CGSpace database and assetstore, and using the <code>5_x-prod</code> (no CG Core v2) branch</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-14">2020-01-14</h2>
|
||||
<ul>
|
||||
<li>I checked the yearly Solr statistics sharding cron job that should have run on 2020-01 on CGSpace (linode18) and saw that there was an error
|
||||
<ul>
|
||||
<li>I manually ran it on the server as the DSpace user and it said “Moving: 51633080 into core statistics-2019”</li>
|
||||
<li>After a few hours it died with the same error that I had seen in the log from the first run:</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code>Exception: Read timed out
|
||||
java.net.SocketTimeoutException: Read timed out
|
||||
</code></pre><ul>
|
||||
<li>I am not sure how I will fix that shard…</li>
|
||||
<li>I discovered a very interesting tool called <a href="https://github.com/LuminosoInsight/python-ftfy">ftfy</a> that attempts to fix errors in UTF-8
|
||||
<ul>
|
||||
<li>I'm curious to start checking input files with this to see what it highlights</li>
|
||||
<li>I ran it on the authors file from last week and it converted characters like those with Spanish accents from multi-byte sequences (I don't know what it's called?) to digraphs (é→é), which vim identifies as:</li>
|
||||
<li><code><e> 101, Hex 65, Octal 145 < ́> 769, Hex 0301, Octal 1401</code></li>
|
||||
<li><code><é> 233, Hex 00e9, Oct 351, Digr e'</code></li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>Ah hah! We need to be <a href="https://withblue.ink/2019/03/11/why-you-need-to-normalize-unicode-strings.html">normalizing characters into their canonical forms</a>!
|
||||
<ul>
|
||||
<li>In Python 3.8 we can even <a href="https://docs.python.org/3/library/unicodedata.html">check if the string is normalized using the <code>unicodedata</code> library</a>:</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code>In [7]: unicodedata.is_normalized('NFC', 'é')
|
||||
Out[7]: False
|
||||
|
||||
In [8]: unicodedata.is_normalized('NFC', 'é')
|
||||
Out[8]: True
|
||||
</code></pre><!-- raw HTML omitted -->
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
</div> <!-- /.blog-main -->
|
||||
|
||||
<aside class="col-sm-3 ml-auto blog-sidebar">
|
||||
|
||||
|
||||
|
||||
<section class="sidebar-module">
|
||||
<h4>Recent Posts</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
||||
|
||||
|
||||
<section class="sidebar-module">
|
||||
<h4>Links</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
|
||||
|
||||
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
|
||||
|
||||
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
</aside>
|
||||
|
||||
|
||||
</div> <!-- /.row -->
|
||||
</div> <!-- /.container -->
|
||||
|
||||
|
||||
|
||||
<footer class="blog-footer">
|
||||
<p dir="auto">
|
||||
|
||||
Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
|
||||
|
||||
</p>
|
||||
<p>
|
||||
<a href="#">Back to top</a>
|
||||
</p>
|
||||
</footer>
|
||||
|
||||
|
||||
</body>
|
||||
|
||||
</html>
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="404 Page not found"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -89,6 +89,8 @@
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -97,8 +99,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Categories"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -90,6 +90,43 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2020-01-06T10:48:30+02:00">Mon Jan 06, 2020</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2020-01/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
|
||||
@ -362,47 +399,6 @@ DELETE 1
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43+03:00">Mon Apr 01, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-04-01">2019-04-01</h2>
|
||||
<ul>
|
||||
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
|
||||
<ul>
|
||||
<li>They asked if we had plans to enable RDF support in CGSpace</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today
|
||||
<ul>
|
||||
<li>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
|
||||
4432 200
|
||||
</code></pre><ul>
|
||||
<li>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</li>
|
||||
<li>Apply country and region corrections and deletions on DSpace Test and CGSpace:</li>
|
||||
</ul>
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
|
||||
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
|
||||
@ -427,6 +423,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -435,8 +433,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -6,7 +6,7 @@
|
||||
<description>Recent content in Categories on CGSpace Notes</description>
|
||||
<generator>Hugo -- gohugo.io</generator>
|
||||
<language>en-us</language>
|
||||
<lastBuildDate>Sun, 01 Dec 2019 11:22:30 +0200</lastBuildDate>
|
||||
<lastBuildDate>Mon, 06 Jan 2020 10:48:30 +0200</lastBuildDate>
|
||||
|
||||
<atom:link href="https://alanorth.github.io/cgspace-notes/categories/index.xml" rel="self" type="application/rss+xml" />
|
||||
|
||||
@ -14,7 +14,7 @@
|
||||
<item>
|
||||
<title>Notes</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/categories/notes/</link>
|
||||
<pubDate>Sun, 01 Dec 2019 11:22:30 +0200</pubDate>
|
||||
<pubDate>Mon, 06 Jan 2020 10:48:30 +0200</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/categories/notes/</guid>
|
||||
<description></description>
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -75,6 +75,43 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2020-01-06T10:48:30+02:00">Mon Jan 06, 2020</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2020-01/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
|
||||
@ -347,47 +384,6 @@ DELETE 1
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43+03:00">Mon Apr 01, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-04-01">2019-04-01</h2>
|
||||
<ul>
|
||||
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
|
||||
<ul>
|
||||
<li>They asked if we had plans to enable RDF support in CGSpace</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today
|
||||
<ul>
|
||||
<li>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
|
||||
4432 200
|
||||
</code></pre><ul>
|
||||
<li>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</li>
|
||||
<li>Apply country and region corrections and deletions on DSpace Test and CGSpace:</li>
|
||||
</ul>
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
|
||||
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
|
||||
@ -412,6 +408,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -420,8 +418,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -6,11 +6,39 @@
|
||||
<description>Recent content in Notes on CGSpace Notes</description>
|
||||
<generator>Hugo -- gohugo.io</generator>
|
||||
<language>en-us</language>
|
||||
<lastBuildDate>Sun, 01 Dec 2019 11:22:30 +0200</lastBuildDate>
|
||||
<lastBuildDate>Mon, 06 Jan 2020 10:48:30 +0200</lastBuildDate>
|
||||
|
||||
<atom:link href="https://alanorth.github.io/cgspace-notes/categories/notes/index.xml" rel="self" type="application/rss+xml" />
|
||||
|
||||
|
||||
<item>
|
||||
<title>January, 2020</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2020-01/</link>
|
||||
<pubDate>Mon, 06 Jan 2020 10:48:30 +0200</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2020-01/</guid>
|
||||
<description><h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>December, 2019</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2019-12/</link>
|
||||
@ -292,34 +320,6 @@ sys 0m1.979s
|
||||
</code></pre></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>January, 2020</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2019-01/</link>
|
||||
<pubDate>Sun, 06 Jan 2019 10:48:30 +0200</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2019-01/</guid>
|
||||
<description><h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>January, 2019</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2019-01/</link>
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -75,6 +75,47 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43+03:00">Mon Apr 01, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-04-01">2019-04-01</h2>
|
||||
<ul>
|
||||
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
|
||||
<ul>
|
||||
<li>They asked if we had plans to enable RDF support in CGSpace</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today
|
||||
<ul>
|
||||
<li>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
|
||||
4432 200
|
||||
</code></pre><ul>
|
||||
<li>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</li>
|
||||
<li>Apply country and region corrections and deletions on DSpace Test and CGSpace:</li>
|
||||
</ul>
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
|
||||
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
|
||||
@ -152,43 +193,6 @@ sys 0m1.979s
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-01-06T10:48:30+02:00">Sun Jan 06, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
|
||||
@ -405,6 +409,8 @@ sys 0m1.979s
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -413,8 +419,6 @@ sys 0m1.979s
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -418,6 +418,8 @@ COPY 54701
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -426,8 +428,6 @@ COPY 54701
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Categories"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -90,6 +90,47 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43+03:00">Mon Apr 01, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-04-01">2019-04-01</h2>
|
||||
<ul>
|
||||
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
|
||||
<ul>
|
||||
<li>They asked if we had plans to enable RDF support in CGSpace</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today
|
||||
<ul>
|
||||
<li>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
|
||||
4432 200
|
||||
</code></pre><ul>
|
||||
<li>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</li>
|
||||
<li>Apply country and region corrections and deletions on DSpace Test and CGSpace:</li>
|
||||
</ul>
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
|
||||
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
|
||||
@ -167,43 +208,6 @@ sys 0m1.979s
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-01-06T10:48:30+02:00">Sun Jan 06, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
|
||||
@ -420,6 +424,8 @@ sys 0m1.979s
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -428,8 +434,6 @@ sys 0m1.979s
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Categories"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -433,6 +433,8 @@ COPY 54701
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -441,8 +443,6 @@ COPY 54701
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Categories"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -394,6 +394,8 @@ DELETE 1
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -402,8 +404,6 @@ DELETE 1
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Categories"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -380,6 +380,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -388,8 +390,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Categories"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -189,6 +189,8 @@
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -197,8 +199,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -15,7 +15,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="CGIAR Library Migration"/>
|
||||
<meta name="twitter:description" content="Notes on the migration of the CGIAR Library to CGSpace"/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -274,6 +274,8 @@ dspace=# select setval('handle_seq',86873);
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -282,8 +284,6 @@ dspace=# select setval('handle_seq',86873);
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -15,7 +15,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="CGSpace CG Core v2 Migration"/>
|
||||
<meta name="twitter:description" content="Possible changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -446,6 +446,8 @@
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -454,8 +456,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="CGSpace Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -90,6 +90,43 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2020-01-06T10:48:30+02:00">Mon Jan 06, 2020</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2020-01/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
|
||||
@ -362,47 +399,6 @@ DELETE 1
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43+03:00">Mon Apr 01, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-04-01">2019-04-01</h2>
|
||||
<ul>
|
||||
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
|
||||
<ul>
|
||||
<li>They asked if we had plans to enable RDF support in CGSpace</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today
|
||||
<ul>
|
||||
<li>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
|
||||
4432 200
|
||||
</code></pre><ul>
|
||||
<li>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</li>
|
||||
<li>Apply country and region corrections and deletions on DSpace Test and CGSpace:</li>
|
||||
</ul>
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
|
||||
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
|
||||
@ -427,6 +423,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -435,8 +433,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -6,11 +6,39 @@
|
||||
<description>Recent content on CGSpace Notes</description>
|
||||
<generator>Hugo -- gohugo.io</generator>
|
||||
<language>en-us</language>
|
||||
<lastBuildDate>Sun, 01 Dec 2019 11:22:30 +0200</lastBuildDate>
|
||||
<lastBuildDate>Mon, 06 Jan 2020 10:48:30 +0200</lastBuildDate>
|
||||
|
||||
<atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" />
|
||||
|
||||
|
||||
<item>
|
||||
<title>January, 2020</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2020-01/</link>
|
||||
<pubDate>Mon, 06 Jan 2020 10:48:30 +0200</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2020-01/</guid>
|
||||
<description><h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>December, 2019</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2019-12/</link>
|
||||
@ -292,34 +320,6 @@ sys 0m1.979s
|
||||
</code></pre></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>January, 2020</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2019-01/</link>
|
||||
<pubDate>Sun, 06 Jan 2019 10:48:30 +0200</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2019-01/</guid>
|
||||
<description><h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>January, 2019</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2019-01/</link>
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="CGSpace Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -90,6 +90,47 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43+03:00">Mon Apr 01, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-04-01">2019-04-01</h2>
|
||||
<ul>
|
||||
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
|
||||
<ul>
|
||||
<li>They asked if we had plans to enable RDF support in CGSpace</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today
|
||||
<ul>
|
||||
<li>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
|
||||
4432 200
|
||||
</code></pre><ul>
|
||||
<li>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</li>
|
||||
<li>Apply country and region corrections and deletions on DSpace Test and CGSpace:</li>
|
||||
</ul>
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
|
||||
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
|
||||
@ -167,43 +208,6 @@ sys 0m1.979s
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-01-06T10:48:30+02:00">Sun Jan 06, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
|
||||
@ -420,6 +424,8 @@ sys 0m1.979s
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -428,8 +434,6 @@ sys 0m1.979s
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="CGSpace Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -433,6 +433,8 @@ COPY 54701
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -441,8 +443,6 @@ COPY 54701
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="CGSpace Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -394,6 +394,8 @@ DELETE 1
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -402,8 +404,6 @@ DELETE 1
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="CGSpace Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -380,6 +380,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -388,8 +390,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="CGSpace Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -189,6 +189,8 @@
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -197,8 +199,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -90,6 +90,43 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2020-01-06T10:48:30+02:00">Mon Jan 06, 2020</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2020-01/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
|
||||
@ -362,47 +399,6 @@ DELETE 1
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43+03:00">Mon Apr 01, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-04-01">2019-04-01</h2>
|
||||
<ul>
|
||||
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
|
||||
<ul>
|
||||
<li>They asked if we had plans to enable RDF support in CGSpace</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today
|
||||
<ul>
|
||||
<li>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
|
||||
4432 200
|
||||
</code></pre><ul>
|
||||
<li>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</li>
|
||||
<li>Apply country and region corrections and deletions on DSpace Test and CGSpace:</li>
|
||||
</ul>
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
|
||||
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
|
||||
@ -427,6 +423,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -435,8 +433,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -6,11 +6,39 @@
|
||||
<description>Recent content in Posts on CGSpace Notes</description>
|
||||
<generator>Hugo -- gohugo.io</generator>
|
||||
<language>en-us</language>
|
||||
<lastBuildDate>Sun, 01 Dec 2019 11:22:30 +0200</lastBuildDate>
|
||||
<lastBuildDate>Mon, 06 Jan 2020 10:48:30 +0200</lastBuildDate>
|
||||
|
||||
<atom:link href="https://alanorth.github.io/cgspace-notes/posts/index.xml" rel="self" type="application/rss+xml" />
|
||||
|
||||
|
||||
<item>
|
||||
<title>January, 2020</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2020-01/</link>
|
||||
<pubDate>Mon, 06 Jan 2020 10:48:30 +0200</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2020-01/</guid>
|
||||
<description><h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>December, 2019</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2019-12/</link>
|
||||
@ -292,34 +320,6 @@ sys 0m1.979s
|
||||
</code></pre></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>January, 2020</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2019-01/</link>
|
||||
<pubDate>Sun, 06 Jan 2019 10:48:30 +0200</pubDate>
|
||||
|
||||
<guid>https://alanorth.github.io/cgspace-notes/2019-01/</guid>
|
||||
<description><h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul></description>
|
||||
</item>
|
||||
|
||||
<item>
|
||||
<title>January, 2019</title>
|
||||
<link>https://alanorth.github.io/cgspace-notes/2019-01/</link>
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -90,6 +90,47 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43+03:00">Mon Apr 01, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-04-01">2019-04-01</h2>
|
||||
<ul>
|
||||
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
|
||||
<ul>
|
||||
<li>They asked if we had plans to enable RDF support in CGSpace</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today
|
||||
<ul>
|
||||
<li>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
|
||||
4432 200
|
||||
</code></pre><ul>
|
||||
<li>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</li>
|
||||
<li>Apply country and region corrections and deletions on DSpace Test and CGSpace:</li>
|
||||
</ul>
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
|
||||
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
|
||||
@ -167,43 +208,6 @@ sys 0m1.979s
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-01-06T10:48:30+02:00">Sun Jan 06, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
|
||||
@ -420,6 +424,8 @@ sys 0m1.979s
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -428,8 +434,6 @@ sys 0m1.979s
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -433,6 +433,8 @@ COPY 54701
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -441,8 +443,6 @@ COPY 54701
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -394,6 +394,8 @@ DELETE 1
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -402,8 +404,6 @@ DELETE 1
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -380,6 +380,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -388,8 +390,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -9,12 +9,12 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2019-12-01T11:22:30+02:00" />
|
||||
<meta property="og:updated_time" content="2020-01-06T10:48:30+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -28,7 +28,7 @@
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2019-12-01T11:22:30+02:00",
|
||||
"dateModified": "2020-01-06T10:48:30+02:00",
|
||||
"keywords": "notes,migration,notes,",
|
||||
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
|
||||
}
|
||||
@ -189,6 +189,8 @@
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -197,8 +199,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -3,9 +3,10 @@ User-agent: *
|
||||
|
||||
Disallow: /cgspace-notes/categories/
|
||||
Disallow: /cgspace-notes/
|
||||
Disallow: /cgspace-notes/2019-12/
|
||||
Disallow: /cgspace-notes/2020-01/
|
||||
Disallow: /cgspace-notes/categories/notes/
|
||||
Disallow: /cgspace-notes/posts/
|
||||
Disallow: /cgspace-notes/2019-12/
|
||||
Disallow: /cgspace-notes/2019-11/
|
||||
Disallow: /cgspace-notes/cgspace-cgcorev2-migration/
|
||||
Disallow: /cgspace-notes/tags/migration/
|
||||
@ -20,7 +21,6 @@ Disallow: /cgspace-notes/2019-04/
|
||||
Disallow: /cgspace-notes/2019-03/
|
||||
Disallow: /cgspace-notes/2019-02/
|
||||
Disallow: /cgspace-notes/2019-01/
|
||||
Disallow: /cgspace-notes/2019-01/
|
||||
Disallow: /cgspace-notes/2018-12/
|
||||
Disallow: /cgspace-notes/2018-11/
|
||||
Disallow: /cgspace-notes/2018-10/
|
||||
|
@ -4,12 +4,27 @@
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
|
||||
<lastmod>2020-01-07T12:24:29+02:00</lastmod>
|
||||
<lastmod>2020-01-08T15:33:56+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/</loc>
|
||||
<lastmod>2020-01-07T12:24:29+02:00</lastmod>
|
||||
<lastmod>2020-01-08T15:33:56+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2020-01/</loc>
|
||||
<lastmod>2020-01-08T15:33:56+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
|
||||
<lastmod>2020-01-08T15:33:56+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
|
||||
<lastmod>2020-01-08T15:33:56+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
@ -17,16 +32,6 @@
|
||||
<lastmod>2019-12-30T14:28:15+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
|
||||
<lastmod>2020-01-07T12:24:29+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
|
||||
<lastmod>2020-01-07T12:24:29+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2019-11/</loc>
|
||||
<lastmod>2019-11-28T17:30:45+02:00</lastmod>
|
||||
@ -92,11 +97,6 @@
|
||||
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2019-01/</loc>
|
||||
<lastmod>2020-01-07T12:24:29+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2019-01/</loc>
|
||||
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
|
||||
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Tags"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -90,6 +90,43 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2020-01-06T10:48:30+02:00">Mon Jan 06, 2020</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2020-01/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
|
||||
@ -362,47 +399,6 @@ DELETE 1
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43+03:00">Mon Apr 01, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-04-01">2019-04-01</h2>
|
||||
<ul>
|
||||
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
|
||||
<ul>
|
||||
<li>They asked if we had plans to enable RDF support in CGSpace</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today
|
||||
<ul>
|
||||
<li>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
|
||||
4432 200
|
||||
</code></pre><ul>
|
||||
<li>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</li>
|
||||
<li>Apply country and region corrections and deletions on DSpace Test and CGSpace:</li>
|
||||
</ul>
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
|
||||
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
|
||||
@ -427,6 +423,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -435,8 +433,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Migration"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -129,6 +129,8 @@
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -137,8 +139,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -379,6 +379,8 @@ DELETE 1
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -387,8 +389,6 @@ DELETE 1
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -365,6 +365,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -373,8 +375,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Notes"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -174,6 +174,8 @@
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -182,8 +184,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Tags"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -90,6 +90,47 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43+03:00">Mon Apr 01, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-04-01">2019-04-01</h2>
|
||||
<ul>
|
||||
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
|
||||
<ul>
|
||||
<li>They asked if we had plans to enable RDF support in CGSpace</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today
|
||||
<ul>
|
||||
<li>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
|
||||
4432 200
|
||||
</code></pre><ul>
|
||||
<li>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</li>
|
||||
<li>Apply country and region corrections and deletions on DSpace Test and CGSpace:</li>
|
||||
</ul>
|
||||
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
|
||||
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
|
||||
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
|
||||
@ -167,43 +208,6 @@ sys 0m1.979s
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-01-06T10:48:30+02:00">Sun Jan 06, 2019</time> by Alan Orth in
|
||||
<i class="fa fa-folder" aria-hidden="true"></i> <a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-01-06">2020-01-06</h2>
|
||||
<ul>
|
||||
<li>Open <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=706">a ticket</a> with Atmire to request a quote for the upgrade to DSpace 6</li>
|
||||
<li>Last week Altmetric responded about the <a href="https://hdl.handle.net/10568/97087">item</a> that had a lower score than than its DOI
|
||||
<ul>
|
||||
<li>The score is now linked to the DOI</li>
|
||||
<li>Another <a href="https://handle.hdl.net/10568/91278">item</a> that had the same problem in 2019 has now also linked to the score for its DOI</li>
|
||||
<li>Another <a href="https://hdl.handle.net/10568/81236">item</a> that had the same problem in 2019 has also been fixed</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<h2 id="2020-01-07">2020-01-07</h2>
|
||||
<ul>
|
||||
<li>Peter Ballantyne highlighted one more WLE <a href="https://hdl.handle.net/10568/101286">item</a> that is missing the Altmetric score that its DOI has
|
||||
<ul>
|
||||
<li>The DOI has a score of 259, but the Handle has no score at all</li>
|
||||
<li>I <a href="https://twitter.com/mralanorth/status/1214471427157626881">tweeted</a> the CGSpace repository link</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
|
||||
@ -420,6 +424,8 @@ sys 0m1.979s
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -428,8 +434,6 @@ sys 0m1.979s
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Tags"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -433,6 +433,8 @@ COPY 54701
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -441,8 +443,6 @@ COPY 54701
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Tags"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -394,6 +394,8 @@ DELETE 1
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -402,8 +404,6 @@ DELETE 1
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Tags"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -380,6 +380,8 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -388,8 +390,6 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
@ -14,7 +14,7 @@
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Tags"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.62.0" />
|
||||
<meta name="generator" content="Hugo 0.62.2" />
|
||||
|
||||
|
||||
|
||||
@ -189,6 +189,8 @@
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2020-01/">January, 2020</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-12/">December, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-11/">November, 2019</a></li>
|
||||
@ -197,8 +199,6 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
Loading…
Reference in New Issue
Block a user