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Add notes for 2020-11-10
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@ -75,5 +75,48 @@ dspace=# COMMIT;
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- Run system updates on CGSpace (linode18) and reboot it
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- I had to restart Tomcat once after the machine started up to get all Solr statistics cores to load properly
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- After about ten more hours the rest of the Solr statistics cores finished processing on DSpace Test and I started optimizing them in Solr admin UI
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## 2020-11-10
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- I am noticing that CGSpace doesn't have any statistics showing for years before 2020, but all cores are loaded successfully in Solr Admin UI... strange
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- I restarted Tomcat and I see in Solr Admin UI that the statistics-2015 core failed to load
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- Looking in the DSpace log I see:
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```
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2020-11-10 08:43:59,634 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2015
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2020-11-10 08:43:59,687 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2018
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2020-11-10 08:43:59,707 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2015
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2020-11-10 08:44:00,004 WARN org.dspace.core.ConfigurationManager @ Requested configuration module: atmire-datatables not found
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2020-11-10 08:44:00,005 WARN org.dspace.core.ConfigurationManager @ Requested configuration module: atmire-datatables not found
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2020-11-10 08:44:00,005 WARN org.dspace.core.ConfigurationManager @ Requested configuration module: atmire-datatables not found
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2020-11-10 08:44:00,325 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2015
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```
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- Seems that the core gets probed twice... perhaps a threading issue?
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- The only thing I can think of is the `acceptorThreadCount` parameter in Tomcat's server.xml, which has been set to 2 since 2018-01 (we started sharding the Solr statistics cores in 2019-01 and that's when this problem arose)
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- I will try reducing that to 1
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- Wow, now it's even worse:
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```
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2020-11-10 08:51:03,007 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2018
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2020-11-10 08:51:03,008 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2015
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2020-11-10 08:51:03,137 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2018
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2020-11-10 08:51:03,153 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2015
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2020-11-10 08:51:03,289 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2015
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2020-11-10 08:51:03,289 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2010
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2020-11-10 08:51:03,475 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2010
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2020-11-10 08:51:03,475 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2016
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2020-11-10 08:51:03,730 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2016
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2020-11-10 08:51:03,731 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2017
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2020-11-10 08:51:03,992 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2017
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2020-11-10 08:51:03,992 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2011
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2020-11-10 08:51:04,178 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2011
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2020-11-10 08:51:04,178 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2012
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```
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- Could it be because we have two Tomcat connectors?
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- I restarted Tomcat a few more times before all cores loaded, and still there are no stats before 2020-01... hmmmmm
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- I added a [lowercase formatter to OpenRXV](https://github.com/ilri/OpenRXV/commit/3816b9b3f3d9182d2ba1a899c1017c5895a59dee) so that we can lowercase AGROVOC subjects during harvesting
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<!-- vim: set sw=2 ts=2: -->
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@ -17,7 +17,7 @@ So far we’ve spent at least fifty hours to process the statistics and stat
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<meta property="og:type" content="article" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2020-11/" />
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<meta property="article:published_time" content="2020-11-01T13:11:54+02:00" />
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<meta property="article:modified_time" content="2020-11-08T14:43:00+02:00" />
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<meta property="article:modified_time" content="2020-11-08T15:03:02+02:00" />
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<meta name="twitter:card" content="summary"/>
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<meta name="twitter:title" content="November, 2020"/>
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@ -39,9 +39,9 @@ So far we’ve spent at least fifty hours to process the statistics and stat
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"@type": "BlogPosting",
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"headline": "November, 2020",
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"url": "https://alanorth.github.io/cgspace-notes/2020-11/",
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"wordCount": "423",
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"wordCount": "817",
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"datePublished": "2020-11-01T13:11:54+02:00",
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"dateModified": "2020-11-08T14:43:00+02:00",
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"dateModified": "2020-11-08T15:03:02+02:00",
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"author": {
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"@type": "Person",
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"name": "Alan Orth"
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@ -197,6 +197,54 @@ dspace=# COMMIT;
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<li>I had to restart Tomcat once after the machine started up to get all Solr statistics cores to load properly</li>
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</ul>
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</li>
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<li>After about ten more hours the rest of the Solr statistics cores finished processing on DSpace Test and I started optimizing them in Solr admin UI</li>
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</ul>
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<h2 id="2020-11-10">2020-11-10</h2>
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<ul>
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<li>I am noticing that CGSpace doesn’t have any statistics showing for years before 2020, but all cores are loaded successfully in Solr Admin UI… strange
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<ul>
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<li>I restarted Tomcat and I see in Solr Admin UI that the statistics-2015 core failed to load</li>
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<li>Looking in the DSpace log I see:</li>
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</ul>
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</li>
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</ul>
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<pre><code>2020-11-10 08:43:59,634 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2015
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2020-11-10 08:43:59,687 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2018
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2020-11-10 08:43:59,707 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2015
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2020-11-10 08:44:00,004 WARN org.dspace.core.ConfigurationManager @ Requested configuration module: atmire-datatables not found
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2020-11-10 08:44:00,005 WARN org.dspace.core.ConfigurationManager @ Requested configuration module: atmire-datatables not found
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2020-11-10 08:44:00,005 WARN org.dspace.core.ConfigurationManager @ Requested configuration module: atmire-datatables not found
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2020-11-10 08:44:00,325 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2015
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</code></pre><ul>
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<li>Seems that the core gets probed twice… perhaps a threading issue?
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<ul>
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<li>The only thing I can think of is the <code>acceptorThreadCount</code> parameter in Tomcat’s server.xml, which has been set to 2 since 2018-01 (we started sharding the Solr statistics cores in 2019-01 and that’s when this problem arose)</li>
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<li>I will try reducing that to 1</li>
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<li>Wow, now it’s even worse:</li>
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</ul>
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</li>
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</ul>
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<pre><code>2020-11-10 08:51:03,007 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2018
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2020-11-10 08:51:03,008 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2015
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2020-11-10 08:51:03,137 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2018
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2020-11-10 08:51:03,153 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2015
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2020-11-10 08:51:03,289 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2015
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2020-11-10 08:51:03,289 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2010
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2020-11-10 08:51:03,475 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2010
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2020-11-10 08:51:03,475 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2016
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2020-11-10 08:51:03,730 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2016
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2020-11-10 08:51:03,731 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2017
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2020-11-10 08:51:03,992 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2017
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2020-11-10 08:51:03,992 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2011
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2020-11-10 08:51:04,178 INFO org.dspace.statistics.SolrLogger @ Created core with name: statistics-2011
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2020-11-10 08:51:04,178 INFO org.dspace.statistics.SolrLogger @ Loading core with name: statistics-2012
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</code></pre><ul>
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<li>Could it be because we have two Tomcat connectors?
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<ul>
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<li>I restarted Tomcat a few more times before all cores loaded, and still there are no stats before 2020-01… hmmmmm</li>
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</ul>
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</li>
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<li>I added a <a href="https://github.com/ilri/OpenRXV/commit/3816b9b3f3d9182d2ba1a899c1017c5895a59dee">lowercase formatter to OpenRXV</a> so that we can lowercase AGROVOC subjects during harvesting</li>
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</ul>
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<!-- raw HTML omitted -->
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@ -9,7 +9,7 @@
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:type" content="website" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
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<meta property="og:updated_time" content="2020-11-08T14:43:00+02:00" />
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<meta name="twitter:card" content="summary"/>
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@ -9,7 +9,7 @@
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:type" content="website" />
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@ -9,7 +9,7 @@
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|
||||
@ -9,7 +9,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2020-11-08T14:43:00+02:00" />
|
||||
<meta property="og:updated_time" content="2020-11-08T15:03:02+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
|
||||
@ -9,7 +9,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2020-11-08T14:43:00+02:00" />
|
||||
<meta property="og:updated_time" content="2020-11-08T15:03:02+02:00" />
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
|
||||
@ -4,27 +4,27 @@
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
|
||||
<lastmod>2020-11-08T14:43:00+02:00</lastmod>
|
||||
<lastmod>2020-11-08T15:03:02+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/</loc>
|
||||
<lastmod>2020-11-08T14:43:00+02:00</lastmod>
|
||||
<lastmod>2020-11-08T15:03:02+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
|
||||
<lastmod>2020-11-08T14:43:00+02:00</lastmod>
|
||||
<lastmod>2020-11-08T15:03:02+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2020-11/</loc>
|
||||
<lastmod>2020-11-08T14:43:00+02:00</lastmod>
|
||||
<lastmod>2020-11-08T15:03:02+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
|
||||
<lastmod>2020-11-08T14:43:00+02:00</lastmod>
|
||||
<lastmod>2020-11-08T15:03:02+02:00</lastmod>
|
||||
</url>
|
||||
|
||||
<url>
|
||||
|
||||
Loading…
Reference in New Issue
Block a user