From b3bd4b1d2ba17654ef153db68a41215312abaac9 Mon Sep 17 00:00:00 2001 From: Alan Orth Date: Fri, 16 Sep 2016 11:13:26 +0300 Subject: [PATCH] Add notes for 2016-09-16 --- content/2016-09.md | 40 +++++++++++++++++++++++++++++++++ public/2016-09/index.html | 44 +++++++++++++++++++++++++++++++++++++ public/index.xml | 44 +++++++++++++++++++++++++++++++++++++ public/tags/notes/index.xml | 44 +++++++++++++++++++++++++++++++++++++ 4 files changed, 172 insertions(+) diff --git a/content/2016-09.md b/content/2016-09.md index 8f0cb7e01..477f78773 100644 --- a/content/2016-09.md +++ b/content/2016-09.md @@ -347,3 +347,43 @@ JAVA_OPTS="-Djava.awt.headless=true -Xms3584m -Xmx3584m -XX:MaxPermSize=256m -XX - Looking at Google Webmaster Tools again, it seems the work I did on URL query parameters and blocking via the `X-Robots-Tag` HTTP header in March, 2016 seem to have had a positive effect on Google's index for CGSpace ![Google Webmaster Tools for CGSpace](../images/2016/09/google-webmaster-tools-index.png) + +## 2016-09-16 + +- CGSpace crashed again, and there are TONS of heap space errors but the datestamps aren't on those lines so I'm not sure if they were yesterday: + +``` +dn:CN=Orentlicher\, Natalie (CIAT),OU=Standard,OU=Users,OU=HQ,OU=CIATHUB,dc=cgiarad,dc=org +Thu Sep 15 18:45:25 UTC 2016 | Query:id: 55785 AND type:2 +Thu Sep 15 18:45:26 UTC 2016 | Updating : 100/218 docs. +Thu Sep 15 18:45:26 UTC 2016 | Updating : 200/218 docs. +Thu Sep 15 18:45:27 UTC 2016 | Updating : 218/218 docs. +Commit +Commit done +Exception in thread "http-bio-127.0.0.1-8081-exec-247" java.lang.OutOfMemoryError: Java heap space +Exception in thread "http-bio-127.0.0.1-8081-exec-241" java.lang.OutOfMemoryError: Java heap space +Exception in thread "http-bio-127.0.0.1-8081-exec-243" java.lang.OutOfMemoryError: Java heap space +Exception in thread "http-bio-127.0.0.1-8081-exec-258" java.lang.OutOfMemoryError: Java heap space +Exception in thread "http-bio-127.0.0.1-8081-exec-268" java.lang.OutOfMemoryError: Java heap space +Exception in thread "http-bio-127.0.0.1-8081-exec-263" java.lang.OutOfMemoryError: Java heap space +Exception in thread "http-bio-127.0.0.1-8081-exec-280" java.lang.OutOfMemoryError: Java heap space +Exception in thread "Thread-54216" org.apache.solr.client.solrj.impl.HttpSolrServer$RemoteSolrException: Exception writing document id 7feaa95d-8e1f-4f45-80bb +-e14ef82ee224 to the index; possible analysis error. + at org.apache.solr.client.solrj.impl.HttpSolrServer.executeMethod(HttpSolrServer.java:552) + at org.apache.solr.client.solrj.impl.HttpSolrServer.request(HttpSolrServer.java:210) + at org.apache.solr.client.solrj.impl.HttpSolrServer.request(HttpSolrServer.java:206) + at org.apache.solr.client.solrj.request.AbstractUpdateRequest.process(AbstractUpdateRequest.java:124) + at org.apache.solr.client.solrj.SolrServer.add(SolrServer.java:116) + at org.apache.solr.client.solrj.SolrServer.add(SolrServer.java:102) + at com.atmire.statistics.SolrLogThread.run(SourceFile:25) +``` + +- I bumped the heap space from 4096m to 5120m to see if this is *really* about heap speace or not. +- Looking into some of these errors that I've seen this week but haven't noticed before: + +``` +# zcat -f -- /var/log/tomcat7/catalina.* | grep -c 'Failed to generate the schema for the JAX-B elements' +113 +``` + +- I've sent a message to Atmire about the Solr error to see if it's related to their batch update module diff --git a/public/2016-09/index.html b/public/2016-09/index.html index 5bd4fe502..b2a6cfeac 100644 --- a/public/2016-09/index.html +++ b/public/2016-09/index.html @@ -477,6 +477,50 @@ java.util.Map does not have a no-arg default constructor.

Google Webmaster Tools for CGSpace

+

2016-09-16

+ + + +
dn:CN=Orentlicher\, Natalie (CIAT),OU=Standard,OU=Users,OU=HQ,OU=CIATHUB,dc=cgiarad,dc=org
+Thu Sep 15 18:45:25 UTC 2016 | Query:id: 55785 AND type:2
+Thu Sep 15 18:45:26 UTC 2016 | Updating : 100/218 docs.
+Thu Sep 15 18:45:26 UTC 2016 | Updating : 200/218 docs.
+Thu Sep 15 18:45:27 UTC 2016 | Updating : 218/218 docs.
+Commit
+Commit done
+Exception in thread "http-bio-127.0.0.1-8081-exec-247" java.lang.OutOfMemoryError: Java heap space
+Exception in thread "http-bio-127.0.0.1-8081-exec-241" java.lang.OutOfMemoryError: Java heap space
+Exception in thread "http-bio-127.0.0.1-8081-exec-243" java.lang.OutOfMemoryError: Java heap space
+Exception in thread "http-bio-127.0.0.1-8081-exec-258" java.lang.OutOfMemoryError: Java heap space
+Exception in thread "http-bio-127.0.0.1-8081-exec-268" java.lang.OutOfMemoryError: Java heap space
+Exception in thread "http-bio-127.0.0.1-8081-exec-263" java.lang.OutOfMemoryError: Java heap space
+Exception in thread "http-bio-127.0.0.1-8081-exec-280" java.lang.OutOfMemoryError: Java heap space
+Exception in thread "Thread-54216" org.apache.solr.client.solrj.impl.HttpSolrServer$RemoteSolrException: Exception writing document id 7feaa95d-8e1f-4f45-80bb
+-e14ef82ee224 to the index; possible analysis error.
+        at org.apache.solr.client.solrj.impl.HttpSolrServer.executeMethod(HttpSolrServer.java:552)
+        at org.apache.solr.client.solrj.impl.HttpSolrServer.request(HttpSolrServer.java:210)
+        at org.apache.solr.client.solrj.impl.HttpSolrServer.request(HttpSolrServer.java:206)
+        at org.apache.solr.client.solrj.request.AbstractUpdateRequest.process(AbstractUpdateRequest.java:124)
+        at org.apache.solr.client.solrj.SolrServer.add(SolrServer.java:116)
+        at org.apache.solr.client.solrj.SolrServer.add(SolrServer.java:102)
+        at com.atmire.statistics.SolrLogThread.run(SourceFile:25)
+
+ + + +
# zcat -f -- /var/log/tomcat7/catalina.* | grep -c 'Failed to generate the schema for the JAX-B elements'
+113
+
+ + +