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Update notes for 2018-06-12
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@ -127,3 +127,64 @@ Failed to startup the DSpace Service Manager: failure starting up spring service
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- I was curious to see if I could create a GREL for use with a custom text facet in Open Refine to find cells with two or more consecutive spaces
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- I was curious to see if I could create a GREL for use with a custom text facet in Open Refine to find cells with two or more consecutive spaces
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- I always use the built-in trim and collapse transformations anyways, but this seems to work to find the offending cells: `isNotNull(value.match(/.*?\s{2,}.*?/))`
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- I always use the built-in trim and collapse transformations anyways, but this seems to work to find the offending cells: `isNotNull(value.match(/.*?\s{2,}.*?/))`
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- I wonder if I should start checking for "smart" quotes like ’ (hex 2019)
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- I wonder if I should start checking for "smart" quotes like ’ (hex 2019)
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## 2018-06-12
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- Udana from IWMI asked about the OAI base URL for their community on CGSpace
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- I think it should be this: https://cgspace.cgiar.org/oai/request?verb=ListRecords&metadataPrefix=oai_dc&set=com_10568_16814
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- The style sheet obfuscates the data, but if you look at the source it is all there, including information about pagination of results
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- Regarding Udana's Book Chapters and Reports on DSpace Test last week, Abenet told him to fix some character encoding and CRP issues, then I told him I'd check them after that
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- The latest batch of IITA's 200 records (based on Abenet's version `Mercy1805_AY.xls`) are now in the [IITA_Jan_9_II_Ab](https://dspacetest.cgiar.org/handle/10568/96071) collection
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- So here are some corrections:
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- use of Unicode smart quote (hex 2019) in countries and affiliations, for example "COTE D’IVOIRE" and "Institut d’Economic Rurale, Mali"
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- inconsistencies in `cg.contributor.affiliation`:
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- "Centro Internacional de Agricultura Tropical" and "Centro International de Agricultura Tropical" should use the English name of CIAT (International Center for Tropical Agriculture)
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- "Institut International d'Agriculture Tropicale" should use the English name of IITA (International Institute of Tropical Agriculture)
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- "East and Southern Africa Regional Center" and "Eastern and Southern Africa Regional Centre"
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- "Institut de la Recherche Agronomique, Cameroon" and "Institut de Recherche Agronomique, Cameroon"
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- "Institut des Recherches Agricoles du Bénin" and "Institut National des Recherche Agricoles du Benin" and "National Agricultural Research Institute, Benin"
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- "Institute of Agronomic Research, Cameroon" and "Institute of Agronomy Research, Cameroon"
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- "Rivers State University" and "Rivers State University of Science and Technology"
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- "Universität Hannover" and "University of Hannover"
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- inconsistencies in `cg.subject.iita`:
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- "AMELIORATION DES PLANTES" and "AMÉLIORATION DES PLANTES"
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- "PRODUCTION VEGETALE" and "PRODUCTION VÉGÉTALE"
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- "CONTRÔLE DE MALADIES" and "CONTROLE DES MALADIES"
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- "HANDLING, TRANSPORT, STORAGE AND PROTECTION OF AGRICULTURAL PRODUCT" and "HANDLING, TRANSPORT, STORAGE AND PROTECTION OF AGRICULTURAL PRODUCTS"
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- "RAVAGEURS DE PLANTES" and "RAVAGEURS DES PLANTES"
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- "SANTE DES PLANTES" and "SANTÉ DES PLANTES"
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- "SOCIOECONOMIE" and "SOCIOECONOMY"
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- inconsistencies in `dc.description.sponsorship`:
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- "Belgian Corporation" and "Belgium Corporation"
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- inconsistencies in `dc.subject`:
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- "AFRICAN CASSAVA MOSAIC" and "AFRICAN CASSAVA MOSAIC DISEASE"
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- "ASPERGILLU FLAVUS" and "ASPERGILLUS FLAVUS"
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- "BIOTECHNOLOGIES" and "BIOTECHNOLOGY"
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- "CASSAVA MOSAIC DISEASE" and "CASSAVA MOSAIC DISEASES" and "CASSAVA MOSAIC VIRUS"
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- "CASSAVA PROCESSING" and "CASSAVA PROCESSING TECHNOLOGY"
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- "CROPPING SYSTEM" and "CROPPING SYSTEMS"
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- "DRY SEASON" and "DRY-SEASON"
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- "FERTILIZER" and "FERTILIZERS"
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- "LEGUME" and "LEGUMES"
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- "LEGUMINOSAE" and "LEGUMINOUS"
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- "LEGUMINOUS COVER CROP" and "LEGUMINOUS COVER CROPS"
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- "MATÉRIEL DE PLANTATION" and "MATÉRIELS DE PLANTATION"
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- I noticed that some records do have encoding errors in the `dc.description.abstract` field, but only four of them so probably not from Abenet's handling of the XLS file
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- Based on manually eyeballing the text I used a custom text facet with this GREL to identify the records:
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```
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or(
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value.contains('€'),
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value.contains('6g'),
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value.contains('6m'),
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value.contains('6d'),
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value.contains('6e')
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)
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```
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- So IITA should double check the abstracts for these:
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- https://dspacetest.cgiar.org/10568/96184
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- https://dspacetest.cgiar.org/10568/96141
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- https://dspacetest.cgiar.org/10568/96118
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- https://dspacetest.cgiar.org/10568/96113
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# vim: set sw=2 ts=2:
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@ -41,7 +41,7 @@ sys 2m7.289s
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<meta property="article:published_time" content="2018-06-04T19:49:54-07:00"/>
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<meta property="article:published_time" content="2018-06-04T19:49:54-07:00"/>
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<meta property="article:modified_time" content="2018-06-10T19:32:12+03:00"/>
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<meta property="article:modified_time" content="2018-06-11T15:21:14+03:00"/>
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@ -93,9 +93,9 @@ sys 2m7.289s
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"@type": "BlogPosting",
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"@type": "BlogPosting",
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"headline": "June, 2018",
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"headline": "June, 2018",
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"url": "https://alanorth.github.io/cgspace-notes/2018-06/",
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"url": "https://alanorth.github.io/cgspace-notes/2018-06/",
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"wordCount": "1025",
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"wordCount": "1462",
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"datePublished": "2018-06-04T19:49:54-07:00",
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"datePublished": "2018-06-04T19:49:54-07:00",
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"dateModified": "2018-06-10T19:32:12+03:00",
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"dateModified": "2018-06-11T15:21:14+03:00",
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"author": {
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"author": {
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"@type": "Person",
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"@type": "Person",
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"name": "Alan Orth"
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"name": "Alan Orth"
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@ -312,6 +312,78 @@ Failed to startup the DSpace Service Manager: failure starting up spring service
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<li>I wonder if I should start checking for “smart” quotes like ’ (hex 2019)</li>
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<li>I wonder if I should start checking for “smart” quotes like ’ (hex 2019)</li>
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</ul>
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</ul>
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<h2 id="2018-06-12">2018-06-12</h2>
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<ul>
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<li>Udana from IWMI asked about the OAI base URL for their community on CGSpace</li>
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<li>I think it should be this: <a href="https://cgspace.cgiar.org/oai/request?verb=ListRecords&metadataPrefix=oai_dc&set=com_10568_16814">https://cgspace.cgiar.org/oai/request?verb=ListRecords&metadataPrefix=oai_dc&set=com_10568_16814</a></li>
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<li>The style sheet obfuscates the data, but if you look at the source it is all there, including information about pagination of results</li>
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<li>Regarding Udana’s Book Chapters and Reports on DSpace Test last week, Abenet told him to fix some character encoding and CRP issues, then I told him I’d check them after that</li>
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<li>The latest batch of IITA’s 200 records (based on Abenet’s version <code>Mercy1805_AY.xls</code>) are now in the <a href="https://dspacetest.cgiar.org/handle/10568/96071">IITA_Jan_9_II_Ab</a> collection</li>
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<li>So here are some corrections:
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<ul>
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<li>use of Unicode smart quote (hex 2019) in countries and affiliations, for example “COTE D’IVOIRE” and “Institut d’Economic Rurale, Mali”</li>
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<li>inconsistencies in <code>cg.contributor.affiliation</code>:</li>
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<li>“Centro Internacional de Agricultura Tropical” and “Centro International de Agricultura Tropical” should use the English name of CIAT (International Center for Tropical Agriculture)</li>
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<li>“Institut International d’Agriculture Tropicale” should use the English name of IITA (International Institute of Tropical Agriculture)</li>
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<li>“East and Southern Africa Regional Center” and “Eastern and Southern Africa Regional Centre”</li>
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<li>“Institut de la Recherche Agronomique, Cameroon” and “Institut de Recherche Agronomique, Cameroon”</li>
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<li>“Institut des Recherches Agricoles du Bénin” and “Institut National des Recherche Agricoles du Benin” and “National Agricultural Research Institute, Benin”</li>
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<li>“Institute of Agronomic Research, Cameroon” and “Institute of Agronomy Research, Cameroon”</li>
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<li>“Rivers State University” and “Rivers State University of Science and Technology”</li>
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<li>“Universität Hannover” and “University of Hannover”</li>
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<li>inconsistencies in <code>cg.subject.iita</code>:</li>
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<li>“AMELIORATION DES PLANTES” and “AMÉLIORATION DES PLANTES”</li>
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<li>“PRODUCTION VEGETALE” and “PRODUCTION VÉGÉTALE”</li>
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<li>“CONTRÔLE DE MALADIES” and “CONTROLE DES MALADIES”</li>
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<li>“HANDLING, TRANSPORT, STORAGE AND PROTECTION OF AGRICULTURAL PRODUCT” and “HANDLING, TRANSPORT, STORAGE AND PROTECTION OF AGRICULTURAL PRODUCTS”</li>
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<li>“RAVAGEURS DE PLANTES” and “RAVAGEURS DES PLANTES”</li>
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<li>“SANTE DES PLANTES” and “SANTÉ DES PLANTES”</li>
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<li>“SOCIOECONOMIE” and “SOCIOECONOMY”</li>
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<li>inconsistencies in <code>dc.description.sponsorship</code>:</li>
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<li>“Belgian Corporation” and “Belgium Corporation”</li>
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<li>inconsistencies in <code>dc.subject</code>:</li>
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<li>“AFRICAN CASSAVA MOSAIC” and “AFRICAN CASSAVA MOSAIC DISEASE”</li>
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<li>“ASPERGILLU FLAVUS” and “ASPERGILLUS FLAVUS”</li>
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<li>“BIOTECHNOLOGIES” and “BIOTECHNOLOGY”</li>
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<li>“CASSAVA MOSAIC DISEASE” and “CASSAVA MOSAIC DISEASES” and “CASSAVA MOSAIC VIRUS”</li>
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<li>“CASSAVA PROCESSING” and “CASSAVA PROCESSING TECHNOLOGY”</li>
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<li>“CROPPING SYSTEM” and “CROPPING SYSTEMS”</li>
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<li>“DRY SEASON” and “DRY-SEASON”</li>
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<li>“FERTILIZER” and “FERTILIZERS”</li>
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<li>“LEGUME” and “LEGUMES”</li>
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<li>“LEGUMINOSAE” and “LEGUMINOUS”</li>
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<li>“LEGUMINOUS COVER CROP” and “LEGUMINOUS COVER CROPS”</li>
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<li>“MATÉRIEL DE PLANTATION” and “MATÉRIELS DE PLANTATION”</li>
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<li>I noticed that some records do have encoding errors in the <code>dc.description.abstract</code> field, but only four of them so probably not from Abenet’s handling of the XLS file</li>
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<li>Based on manually eyeballing the text I used a custom text facet with this GREL to identify the records:</li>
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</ul></li>
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</ul>
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<pre><code>or(
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value.contains('€'),
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value.contains('6g'),
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value.contains('6m'),
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value.contains('6d'),
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value.contains('6e')
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)
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</code></pre>
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<ul>
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<li>So IITA should double check the abstracts for these:
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<ul>
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<li><a href="https://dspacetest.cgiar.org/10568/96184">https://dspacetest.cgiar.org/10568/96184</a></li>
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<li><a href="https://dspacetest.cgiar.org/10568/96141">https://dspacetest.cgiar.org/10568/96141</a></li>
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<li><a href="https://dspacetest.cgiar.org/10568/96118">https://dspacetest.cgiar.org/10568/96118</a></li>
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<li><a href="https://dspacetest.cgiar.org/10568/96113">https://dspacetest.cgiar.org/10568/96113</a>
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<br /></li>
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</ul></li>
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</ul>
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<h1 id="vim-set-sw-2-ts-2">vim: set sw=2 ts=2:</h1>
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@ -4,7 +4,7 @@
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<url>
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/2018-06/</loc>
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<loc>https://alanorth.github.io/cgspace-notes/2018-06/</loc>
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<lastmod>2018-06-10T19:32:12+03:00</lastmod>
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<lastmod>2018-06-11T15:21:14+03:00</lastmod>
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</url>
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</url>
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<url>
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<url>
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<url>
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/</loc>
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<loc>https://alanorth.github.io/cgspace-notes/</loc>
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<lastmod>2018-06-10T19:32:12+03:00</lastmod>
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<lastmod>2018-06-11T15:21:14+03:00</lastmod>
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<priority>0</priority>
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<priority>0</priority>
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</url>
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</url>
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<url>
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
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<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
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<lastmod>2018-06-10T19:32:12+03:00</lastmod>
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<lastmod>2018-06-11T15:21:14+03:00</lastmod>
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<priority>0</priority>
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<priority>0</priority>
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</url>
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</url>
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@ -192,13 +192,13 @@
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<url>
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
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<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
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<lastmod>2018-06-10T19:32:12+03:00</lastmod>
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<lastmod>2018-06-11T15:21:14+03:00</lastmod>
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<priority>0</priority>
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<priority>0</priority>
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</url>
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</url>
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<url>
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<url>
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<loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
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<loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
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<lastmod>2018-06-10T19:32:12+03:00</lastmod>
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<lastmod>2018-06-11T15:21:14+03:00</lastmod>
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<priority>0</priority>
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<priority>0</priority>
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</url>
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</url>
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