Add notes

content/posts/2022-06.md

@@ -169,7 +169,7 @@ $ csvjoin --outer -c alpha2 ~/Downloads/clarisa-countries.csv ~/Downloads/UNSD\
 - Then re-export the UN M.49 countries to a clean list because the one I did yesterday somehow has errors:
 
 ```console
-csvcut -d ';' -c 'ISO-alpha2 Code,Country or Area' ~/Downloads/UNSD\ —\ Methodology.csv | sed -e '1s/ISO-alpha2 Code/alpha2/' -e '1s/Country or Area/UN M.49 Name/' > ~/Downloads/un-countries.csv
+$ csvcut -d ';' -c 'ISO-alpha2 Code,Country or Area' ~/Downloads/UNSD\ —\ Methodology.csv | sed -e '1s/ISO-alpha2 Code/alpha2/' -e '1s/Country or Area/UN M.49 Name/' > ~/Downloads/un-countries.csv
 ```
 
 - Check the number of lines in each file:

content/posts/2024-03.md

@@ -113,4 +113,48 @@ $ csvcut -c 'id,dc.title[en_US],dc.identifier.uri[en_US],cg.link.permalink[en_US
 SELECT ds6_item2itemhandle(dspace_object_id) AS handle FROM metadatavalue WHERE dspace_object_id IN (SELECT uuid FROM item WHERE NOT discoverable) AND metadata_field_id=28 AND text_value LIKE 'Submitted by Alliance TIP Submit%';
 ```
 
+## 2024-03-14
+
+- Looking in to reports of rate limiting of Altmetric's bot on CGSpace
+  - I don't see any HTTP 429 responses for their user agents in any of our logs...
+  - I tried myself on an item page and never hit a limit...
+
+```console
+$ for num in {1..60}; do echo -n "Request ${num}: "; curl -s -o /dev/null -w "%{http_code}" https://dspace7test.ilri.org/items/c9b8999d-3001-42ba-a267-14f4bfa90b53 && echo; done
+Request 1: 200
+Request 2: 200
+Request 3: 200
+Request 4: 200
+...
+Request 60: 200
+```
+
+- All responses were HTTP 200...
+- In any case, I whitelisted their production IPs and told them to try again
+- I imported 468 of IFPRI's 2023 records that were confirmed to not be duplicates to CGSpace
+  - I also spent some time merging metadata from 415 of the remaining 432 duplicates with the metadata for the existing items on CGSpace
+  - This was a bit of dirty work using csvkit, xsv, and OpenRefine
+
+## 2024-03-17
+
+- There are 17 records from IFPRI's 2023 batch that are remaining from the 432 that I identified as already being on CGSpace
+  - These are different in that they are duplicates on CGSpace as well, so the csvjoin failed and the metadata got messed up in my migration
+  - I looked closer and whittled this down to 14 actual records, and spent some time working on them
+  - I isolated 12 of these items that existed on CGSpace and added publication ranks, project identifiers, and provenance links
+  - Now there only remain two confusing records about the Inkomati catchment
+
+## 2024-03-18
+
+- Checking to see how many IFPRI records we have migrated so far:
+
+```console
+$ csvgrep -c 'dc.description.provenance[en_US]' -m 'Original URL from IFPRI CONTENTdm' cgspace.csv \
+  | csvcut -c 'id,dc.title[en_US],dc.identifier.uri[en_US],dc.description.provenance[en_US],dcterms.type[en_US]' \
+  | tee /tmp/ifpri-records.csv \
+  | csvstat --count
+898
+```
+
+- I finalized the remaining two on Inkomati catchment and now we are at 900!
+
 <!-- vim: set sw=2 ts=2: -->

docs/2022-06/index.html

@@ -58,7 +58,7 @@ There seem to be many more of these:
   "@type": "BlogPosting",
   "headline": "June, 2022",
   "url": "https://alanorth.github.io/cgspace-notes/2022-06/",
-  "wordCount": "1788",
+  "wordCount": "1789",
   "datePublished": "2022-06-06T09:01:36+03:00",
   "dateModified": "2023-04-27T13:10:13-07:00",
   "author": {
@@ -321,7 +321,7 @@ There seem to be many more of these:
 <li>Spent some more time working on my <code>countries-to-csv.py</code> script to fix some logic errors</li>
 <li>Then re-export the UN M.49 countries to a clean list because the one I did yesterday somehow has errors:</li>
 </ul>
-<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span>csvcut -d &#39;;&#39; -c &#39;ISO-alpha2 Code,Country or Area&#39; ~/Downloads/UNSD\ —\ Methodology.csv | sed -e &#39;1s/ISO-alpha2 Code/alpha2/&#39; -e &#39;1s/Country or Area/UN M.49 Name/&#39; &gt; ~/Downloads/un-countries.csv
+<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span>$ csvcut -d <span style="color:#e6db74">&#39;;&#39;</span> -c <span style="color:#e6db74">&#39;ISO-alpha2 Code,Country or Area&#39;</span> ~/Downloads/UNSD<span style="color:#ae81ff">\ </span>—<span style="color:#ae81ff">\ </span>Methodology.csv | sed -e <span style="color:#e6db74">&#39;1s/ISO-alpha2 Code/alpha2/&#39;</span> -e <span style="color:#e6db74">&#39;1s/Country or Area/UN M.49 Name/&#39;</span> &gt; ~/Downloads/un-countries.csv
 </span></span></code></pre></div><ul>
 <li>Check the number of lines in each file:</li>
 </ul>

docs/2024-03/index.html

@@ -19,7 +19,7 @@ It might be this issue: https://github.com/DSpace/dspace-angular/issues/2808
 <meta property="og:type" content="article" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2024-03/" />
 <meta property="article:published_time" content="2024-03-01T09:55:00+03:00" />
-<meta property="article:modified_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="article:modified_time" content="2024-03-14T09:29:05+03:00" />
 
 
 
@@ -44,9 +44,9 @@ It might be this issue: https://github.com/DSpace/dspace-angular/issues/2808
   "@type": "BlogPosting",
   "headline": "March, 2024",
   "url": "https://alanorth.github.io/cgspace-notes/2024-03/",
-  "wordCount": "627",
+  "wordCount": "923",
   "datePublished": "2024-03-01T09:55:00+03:00",
-  "dateModified": "2024-03-11T21:58:15+03:00",
+  "dateModified": "2024-03-14T09:29:05+03:00",
   "author": {
     "@type": "Person",
     "name": "Alan Orth"
@@ -236,7 +236,56 @@ It might be this issue: https://github.com/DSpace/dspace-angular/issues/2808
 </li>
 </ul>
 <div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-sql" data-lang="sql"><span style="display:flex;"><span><span style="color:#66d9ef">SELECT</span> ds6_item2itemhandle(dspace_object_id) <span style="color:#66d9ef">AS</span> handle <span style="color:#66d9ef">FROM</span> metadatavalue <span style="color:#66d9ef">WHERE</span> dspace_object_id <span style="color:#66d9ef">IN</span> (<span style="color:#66d9ef">SELECT</span> uuid <span style="color:#66d9ef">FROM</span> item <span style="color:#66d9ef">WHERE</span> <span style="color:#66d9ef">NOT</span> discoverable) <span style="color:#66d9ef">AND</span> metadata_field_id<span style="color:#f92672">=</span><span style="color:#ae81ff">28</span> <span style="color:#66d9ef">AND</span> text_value <span style="color:#66d9ef">LIKE</span> <span style="color:#e6db74">&#39;Submitted by Alliance TIP Submit%&#39;</span>;
-</span></span></code></pre></div><!-- raw HTML omitted -->
+</span></span></code></pre></div><h2 id="2024-03-14">2024-03-14</h2>
+<ul>
+<li>Looking in to reports of rate limiting of Altmetric&rsquo;s bot on CGSpace
+<ul>
+<li>I don&rsquo;t see any HTTP 429 responses for their user agents in any of our logs&hellip;</li>
+<li>I tried myself on an item page and never hit a limit&hellip;</li>
+</ul>
+</li>
+</ul>
+<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span>$ <span style="color:#66d9ef">for</span> num in <span style="color:#f92672">{</span>1..60<span style="color:#f92672">}</span>; <span style="color:#66d9ef">do</span> echo -n <span style="color:#e6db74">&#34;Request </span><span style="color:#e6db74">${</span>num<span style="color:#e6db74">}</span><span style="color:#e6db74">: &#34;</span>; curl -s -o /dev/null -w <span style="color:#e6db74">&#34;%{http_code}&#34;</span> https://dspace7test.ilri.org/items/c9b8999d-3001-42ba-a267-14f4bfa90b53 <span style="color:#f92672">&amp;&amp;</span> echo; <span style="color:#66d9ef">done</span>
+</span></span><span style="display:flex;"><span>Request 1: 200
+</span></span><span style="display:flex;"><span>Request 2: 200
+</span></span><span style="display:flex;"><span>Request 3: 200
+</span></span><span style="display:flex;"><span>Request 4: 200
+</span></span><span style="display:flex;"><span>...
+</span></span><span style="display:flex;"><span>Request 60: 200
+</span></span></code></pre></div><ul>
+<li>All responses were HTTP 200&hellip;</li>
+<li>In any case, I whitelisted their production IPs and told them to try again</li>
+<li>I imported 468 of IFPRI&rsquo;s 2023 records that were confirmed to not be duplicates to CGSpace
+<ul>
+<li>I also spent some time merging metadata from 415 of the remaining 432 duplicates with the metadata for the existing items on CGSpace</li>
+<li>This was a bit of dirty work using csvkit, xsv, and OpenRefine</li>
+</ul>
+</li>
+</ul>
+<h2 id="2024-03-17">2024-03-17</h2>
+<ul>
+<li>There are 17 records from IFPRI&rsquo;s 2023 batch that are remaining from the 432 that I identified as already being on CGSpace
+<ul>
+<li>These are different in that they are duplicates on CGSpace as well, so the csvjoin failed and the metadata got messed up in my migration</li>
+<li>I looked closer and whittled this down to 14 actual records, and spent some time working on them</li>
+<li>I isolated 12 of these items that existed on CGSpace and added publication ranks, project identifiers, and provenance links</li>
+<li>Now there only remain two confusing records about the Inkomati catchment</li>
+</ul>
+</li>
+</ul>
+<h2 id="2024-03-18">2024-03-18</h2>
+<ul>
+<li>Checking to see how many IFPRI records we have migrated so far:</li>
+</ul>
+<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span>$ csvgrep -c <span style="color:#e6db74">&#39;dc.description.provenance[en_US]&#39;</span> -m <span style="color:#e6db74">&#39;Original URL from IFPRI CONTENTdm&#39;</span> cgspace.csv <span style="color:#ae81ff">\
+</span></span></span><span style="display:flex;"><span><span style="color:#ae81ff"></span>  | csvcut -c &#39;id,dc.title[en_US],dc.identifier.uri[en_US],dc.description.provenance[en_US],dcterms.type[en_US]&#39; \
+</span></span><span style="display:flex;"><span>  | tee /tmp/ifpri-records.csv \
+</span></span><span style="display:flex;"><span>  | csvstat --count
+</span></span><span style="display:flex;"><span>898
+</span></span></code></pre></div><ul>
+<li>I finalized the remaining two on Inkomati catchment and now we are at 900!</li>
+</ul>
+<!-- raw HTML omitted -->
 
   
 

docs/categories/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/categories/index.xml

@@ -6,7 +6,7 @@
     <description>Recent content in Categories on CGSpace Notes</description>
     <generator>Hugo -- gohugo.io</generator>
     <language>en-us</language>
-    <lastBuildDate>Mon, 11 Mar 2024 21:58:15 +0300</lastBuildDate>
+    <lastBuildDate>Thu, 14 Mar 2024 09:29:05 +0300</lastBuildDate>
     <atom:link href="https://alanorth.github.io/cgspace-notes/categories/index.xml" rel="self" type="application/rss+xml" />
     <item>
       <title>Notes</title>

docs/categories/notes/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/categories/notes/index.xml

@@ -6,7 +6,7 @@
     <description>Recent content in Notes on CGSpace Notes</description>
     <generator>Hugo -- gohugo.io</generator>
     <language>en-us</language>
-    <lastBuildDate>Mon, 11 Mar 2024 21:58:15 +0300</lastBuildDate>
+    <lastBuildDate>Thu, 14 Mar 2024 09:29:05 +0300</lastBuildDate>
     <atom:link href="https://alanorth.github.io/cgspace-notes/categories/notes/index.xml" rel="self" type="application/rss+xml" />
     <item>
       <title>March, 2024</title>

docs/categories/notes/page/2/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/categories/notes/page/3/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/categories/notes/page/4/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/categories/notes/page/5/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/categories/notes/page/6/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/categories/notes/page/7/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/categories/notes/page/8/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/categories/notes/page/9/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/index.xml

@@ -6,7 +6,7 @@
     <description>Recent content on CGSpace Notes</description>
     <generator>Hugo -- gohugo.io</generator>
     <language>en-us</language>
-    <lastBuildDate>Mon, 11 Mar 2024 21:58:15 +0300</lastBuildDate>
+    <lastBuildDate>Thu, 14 Mar 2024 09:29:05 +0300</lastBuildDate>
     <atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" />
     <item>
       <title>March, 2024</title>

docs/page/10/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/page/11/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/page/2/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/page/3/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/page/4/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/page/5/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/page/6/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/page/7/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/page/8/index.html

@@ -10,7 +10,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2024-03-11T21:58:15+03:00" />
+<meta property="og:updated_time" content="2024-03-14T09:29:05+03:00" />
 
 
 

docs/page/9/index.html

@@ -10,7 +10,7 @@
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docs/posts/index.html

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docs/posts/index.xml

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