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@ -15,7 +15,7 @@ ORCIDs only
ORCIDs plus normal authors
I exported a random item's metadata as CSV, deleted all columns except id and collection, and made a new coloum called ORCID:dc.contributor.author with the following random ORCIDs from the ORCID registry:
I exported a random item’s metadata as CSV, deleted all columns except id and collection, and made a new coloum called ORCID:dc.contributor.author with the following random ORCIDs from the ORCID registry:
0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
" />
@ -35,11 +35,11 @@ ORCIDs only
ORCIDs plus normal authors
I exported a random item's metadata as CSV, deleted all columns except id and collection, and made a new coloum called ORCID:dc.contributor.author with the following random ORCIDs from the ORCID registry:
I exported a random item’s metadata as CSV, deleted all columns except id and collection, and made a new coloum called ORCID:dc.contributor.author with the following random ORCIDs from the ORCID registry:
0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
"/>
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@ -69,7 +69,7 @@ I exported a random item&#39;s metadata as CSV, deleted all columns except id an
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@ -117,7 +117,7 @@ I exported a random item&#39;s metadata as CSV, deleted all columns except id an
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
<span class="fas fa-tag" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
@ -130,17 +130,17 @@ I exported a random item&#39;s metadata as CSV, deleted all columns except id an
<li>ORCIDs plus normal authors</li>
</ul>
</li>
<li>I exported a random item's metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
<li>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
</ul>
<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre><ul>
<li>Hmm, with the <code>dc.contributor.author</code> column removed, DSpace doesn't detect any changes</li>
<li>Hmm, with the <code>dc.contributor.author</code> column removed, DSpace doesn&rsquo;t detect any changes</li>
<li>With a blank <code>dc.contributor.author</code> column, DSpace wants to remove all non-ORCID authors and add the new ORCID authors</li>
<li>I added the <a href="https://github.com/ilri/DSpace/issues/234">disclaimer text</a> to the About page, then added a footer link to the disclaimer's ID, but there is a Bootstrap issue that causes the page content to disappear when using in-page anchors: <a href="https://github.com/twbs/bootstrap/issues/1768">https://github.com/twbs/bootstrap/issues/1768</a></li>
<li>I added the <a href="https://github.com/ilri/DSpace/issues/234">disclaimer text</a> to the About page, then added a footer link to the disclaimer&rsquo;s ID, but there is a Bootstrap issue that causes the page content to disappear when using in-page anchors: <a href="https://github.com/twbs/bootstrap/issues/1768">https://github.com/twbs/bootstrap/issues/1768</a></li>
</ul>
<p><img src="/cgspace-notes/2016/10/bootstrap-issue.png" alt="Bootstrap issue with in-page anchors"></p>
<ul>
<li>Looks like we'll just have to add the text to the About page (without a link) or add a separate page</li>
<li>Looks like we&rsquo;ll just have to add the text to the About page (without a link) or add a separate page</li>
</ul>
<h2 id="2016-10-04">2016-10-04</h2>
<ul>
@ -165,12 +165,12 @@ $ ./delete-metadata-values.py -i authors-delete-3.csv -f dc.contributor.author -
</code></pre><h2 id="2016-10-05">2016-10-05</h2>
<ul>
<li>Work on more infrastructure cleanups for Ansible DSpace role</li>
<li>Clean up Let's Encrypt plumbing and submit pull request for rmg-ansible-public (<a href="https://github.com/ilri/rmg-ansible-public/pull/60">#60</a>)</li>
<li>Clean up Let&rsquo;s Encrypt plumbing and submit pull request for rmg-ansible-public (<a href="https://github.com/ilri/rmg-ansible-public/pull/60">#60</a>)</li>
</ul>
<h2 id="2016-10-06">2016-10-06</h2>
<ul>
<li>Nice! DSpace Test (linode02) is now having <code>java.lang.OutOfMemoryError: Java heap space</code> errors&hellip;</li>
<li>Heap space is 2048m, and we have 5GB of RAM being used for OS cache (Solr!) so let's just bump the memory to 3072m</li>
<li>Heap space is 2048m, and we have 5GB of RAM being used for OS cache (Solr!) so let&rsquo;s just bump the memory to 3072m</li>
<li>Magdalena from CCAFS asked why the colors in the thumbnails for these <a href="https://cgspace.cgiar.org/handle/10568/71249">two</a> <a href="https://cgspace.cgiar.org/handle/10568/71259">items</a> look different, even though they are the same in the PDF itself</li>
</ul>
<p><img src="/cgspace-notes/2016/10/cmyk-vs-srgb.jpg" alt="CMYK vs sRGB colors"></p>
@ -192,12 +192,12 @@ DELETE 11
<pre><code>root@linode01:~# ls -lh /var/log/tomcat7/localhost_access_log.2015* | wc -l
47
</code></pre><ul>
<li>Delete 2GB <code>cron-filter-media.log</code> file, as it is just a log from a cron job and it doesn't get rotated like normal log files (almost a year now maybe)</li>
<li>Delete 2GB <code>cron-filter-media.log</code> file, as it is just a log from a cron job and it doesn&rsquo;t get rotated like normal log files (almost a year now maybe)</li>
</ul>
<h2 id="2016-10-14">2016-10-14</h2>
<ul>
<li>Run all system updates on DSpace Test and reboot server</li>
<li>Looking into some issues with Discovery filters in Atmire's content and usage analysis module after adjusting the filter class</li>
<li>Looking into some issues with Discovery filters in Atmire&rsquo;s content and usage analysis module after adjusting the filter class</li>
<li>Looks like changing the filters from <code>configuration.DiscoverySearchFilterFacet</code> to <code>configuration.DiscoverySearchFilter</code> breaks them in Atmire CUA module</li>
</ul>
<h2 id="2016-10-17">2016-10-17</h2>
@ -216,7 +216,7 @@ DELETE 11
$ git rebase -i dspace-5.5
</code></pre><ul>
<li>Have to fix about ten merge conflicts, mostly in the SCSS for the CGIAR theme</li>
<li>Skip 1e34751b8cf17021f45d4cf2b9a5800c93fb4cb2 in lieu of upstream's 55e623d1c2b8b7b1fa45db6728e172e06bfa8598 (fixes X-Forwarded-For header) because I had made the same fix myself and it's better to use the upstream one</li>
<li>Skip 1e34751b8cf17021f45d4cf2b9a5800c93fb4cb2 in lieu of upstream&rsquo;s 55e623d1c2b8b7b1fa45db6728e172e06bfa8598 (fixes X-Forwarded-For header) because I had made the same fix myself and it&rsquo;s better to use the upstream one</li>
<li>I notice this rebase gets rid of GitHub merge commits&hellip; which actually might be fine because merges are fucking annoying to deal with when remote people merge without pulling and rebasing their branch first</li>
<li>Finished up applying the 5.5 sitemap changes to all themes</li>
<li>Merge the <code>discovery.xml</code> cleanups (<a href="https://github.com/ilri/DSpace/pull/278">#278</a>)</li>
@ -319,7 +319,7 @@ UPDATE 10
dspace=# update metadatavalue set authority='e936f5c5-343d-4c46-aa91-7a1fff6277ed', confidence=600 where metadata_field_id=3 and resource_type_id=2 and text_value like 'Knight-Jones%';
UPDATE 36
</code></pre><ul>
<li>I updated the authority index but nothing seemed to change, so I'll wait and do it again after I update Discovery below</li>
<li>I updated the authority index but nothing seemed to change, so I&rsquo;ll wait and do it again after I update Discovery below</li>
<li>Skype chat with Tsega about the <a href="https://github.com/ilri/ckm-cgspace-contentdm-bridge">IFPRI contentdm bridge</a></li>
<li>We tested harvesting OAI in an example collection to see how it works</li>
<li>Talk to Carlos Quiros about CG Core metadata in CGSpace</li>
@ -332,7 +332,7 @@ UPDATE 36
<pre><code>$ ./fix-metadata-values.py -i countries-fix-18.csv -f dc.coverage.country -t 'correct' -m 228 -d dspace -u dspace -p fuuu
$ ./delete-metadata-values.py -i countries-delete-2.csv -f dc.coverage.country -m 228 -d dspace -u dspace -p fuuu
</code></pre><ul>
<li>Run a shit ton of author fixes from Peter Ballantyne that we've been cleaning up for two months:</li>
<li>Run a shit ton of author fixes from Peter Ballantyne that we&rsquo;ve been cleaning up for two months:</li>
</ul>
<pre><code>$ ./fix-metadata-values.py -i /tmp/authors-fix-pb2.csv -f dc.contributor.author -t correct -m 3 -u dspace -d dspace -p fuuu
</code></pre><ul>