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Add notes for 2018-08-15
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@ -48,4 +48,15 @@ tags: ["Notes"]
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- I just tried to enable the stats again on DSpace Test now that we're on DSpace 5.8 with updated Atmire modules, but every user I search for shows "No data available"
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- I just tried to enable the stats again on DSpace Test now that we're on DSpace 5.8 with updated Atmire modules, but every user I search for shows "No data available"
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- As a test I submitted a new item and I was able to see it in the workflow statistics "data" tab, but not in the graph
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- As a test I submitted a new item and I was able to see it in the workflow statistics "data" tab, but not in the graph
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## 2018-08-15
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- Run through Peter's list of author affiliations from earlier this month
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- I did some quick sanity checks and small cleanups in Open Refine, checking for spaces, weird accents, and encoding errors
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- Finally I ran the [`fix-metadata-value.py`](https://gist.github.com/alanorth/df92cbfb54d762ba21b28f7cd83b6897) script:
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```
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$ ./fix-metadata-values.py -i 2018-08-15-Correct-1083-Affiliations.csv -db dspace -u dspace -p 'fuuu' -f cg.contributor.affiliation -t correct -m 211
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$ ./delete-metadata-values.py -i 2018-08-15-Remove-11-Affiliations.csv -db dspace -u dspace -p 'fuuu' -f cg.contributor.affiliation -m 211
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```
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<!-- vim: set sw=2 ts=2: -->
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<!-- vim: set sw=2 ts=2: -->
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@ -53,7 +53,7 @@ $ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspac
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@ -55,7 +55,7 @@ Replace lzop with xz in log compression cron jobs on DSpace Test—it uses less
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@ -45,7 +45,7 @@ Update GitHub wiki for documentation of maintenance tasks.
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@ -59,7 +59,7 @@ Also, lots of things like “COTE D`LVOIRE” and “COTE D IVOIRE&r
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@ -45,7 +45,7 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
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@ -49,7 +49,7 @@ Also, I noticed the checker log has some errors we should pay attention to:
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@ -53,7 +53,7 @@ There are 3,000 IPs accessing the REST API in a 24-hour period!
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@ -51,7 +51,7 @@ Working on second phase of metadata migration, looks like this will work for mov
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@ -67,7 +67,7 @@ In this case the select query was showing 95 results before the update
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@ -61,7 +61,7 @@ $ git rebase -i dspace-5.5
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@ -53,7 +53,7 @@ $ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b "dc=cgiarad,dc=or
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@ -61,7 +61,7 @@ I exported a random item’s metadata as CSV, deleted all columns except id
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@ -45,7 +45,7 @@ Add dc.type to the output options for Atmire’s Listings and Reports module
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@ -69,7 +69,7 @@ Another worrying error from dspace.log is:
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@ -73,7 +73,7 @@ Looks like we’ll be using cg.identifier.ccafsprojectpii as the field name
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@ -77,7 +77,7 @@ $ identify ~/Desktop/alc_contrastes_desafios.jpg
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@ -63,7 +63,7 @@ $ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p "ImageMagick PDF Th
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@ -29,7 +29,7 @@
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<meta name="twitter:card" content="summary"/>
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<meta name="twitter:title" content="May, 2017"/>
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<meta name="twitter:title" content="May, 2017"/>
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<meta name="twitter:description" content="2017-05-01 ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items: https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683 2017-05-02 Atmire got back about the Workflow Statistics issue, and apparently it’s a bug in the CUA module so they will send us a pull request 2017-05-04 Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire’s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace."/>
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<meta name="twitter:description" content="2017-05-01 ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items: https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683 2017-05-02 Atmire got back about the Workflow Statistics issue, and apparently it’s a bug in the CUA module so they will send us a pull request 2017-05-04 Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire’s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace."/>
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<meta name="twitter:card" content="summary"/>
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<meta name="twitter:title" content="June, 2017"/>
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<meta name="twitter:description" content="2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we’ll create a new sub-community for Phase II and create collections for the research themes there The current “Research Themes” community will be renamed to “WLE Phase I Research Themes” Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg."/>
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<meta name="twitter:description" content="2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we’ll create a new sub-community for Phase II and create collections for the research themes there The current “Research Themes” community will be renamed to “WLE Phase I Research Themes” Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg."/>
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"@type": "BlogPosting",
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"headline": "August, 2018",
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"headline": "August, 2018",
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"url": "https://alanorth.github.io/cgspace-notes/2018-08/",
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"url": "https://alanorth.github.io/cgspace-notes/2018-08/",
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"wordCount": "459",
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"wordCount": "527",
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"datePublished": "2018-08-01T11:52:54+03:00",
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"datePublished": "2018-08-01T11:52:54+03:00",
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"dateModified": "2018-08-01T17:24:49+03:00",
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"dateModified": "2018-08-02T14:29:59+03:00",
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"author": {
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"author": {
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"@type": "Person",
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"name": "Alan Orth"
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"name": "Alan Orth"
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<li>As a test I submitted a new item and I was able to see it in the workflow statistics “data” tab, but not in the graph</li>
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<li>As a test I submitted a new item and I was able to see it in the workflow statistics “data” tab, but not in the graph</li>
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<h2 id="2018-08-15">2018-08-15</h2>
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<li>Run through Peter’s list of author affiliations from earlier this month</li>
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<li>Finally I ran the <a href="https://gist.github.com/alanorth/df92cbfb54d762ba21b28f7cd83b6897"><code>fix-metadata-value.py</code></a> script:</li>
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<pre><code>$ ./fix-metadata-values.py -i 2018-08-15-Correct-1083-Affiliations.csv -db dspace -u dspace -p 'fuuu' -f cg.contributor.affiliation -t correct -m 211
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</code></pre>
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|||||||
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||||||
<url>
|
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|
||||||
<loc>https://alanorth.github.io/cgspace-notes/2018-08/</loc>
|
<loc>https://alanorth.github.io/cgspace-notes/2018-08/</loc>
|
||||||
<lastmod>2018-08-01T17:24:49+03:00</lastmod>
|
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||||||
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|||||||
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||||||
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||||||
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|
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|
||||||
<lastmod>2018-08-01T17:24:49+03:00</lastmod>
|
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|
||||||
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||||||
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|||||||
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||||||
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||||||
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|
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|
||||||
<lastmod>2018-08-01T17:24:49+03:00</lastmod>
|
<lastmod>2018-08-02T14:29:59+03:00</lastmod>
|
||||||
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||||||
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|||||||
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||||||
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||||||
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|
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|
||||||
<lastmod>2018-08-01T17:24:49+03:00</lastmod>
|
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|
||||||
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||||||
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||||||
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|
||||||
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|
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|
||||||
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|
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|
||||||
<lastmod>2018-08-01T17:24:49+03:00</lastmod>
|
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|
||||||
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||||||
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|
Loading…
Reference in New Issue
Block a user