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<meta property="og:title" content=" February, 2016 &middot; CGSpace Notes" />
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February, 2016 &middot; CGSpace Notes
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<section class="header-text">
<h1><a href="/cgspace-notes/">CGSpace Notes</a></h1>
<h1><a href="https://alanorth.github.io/cgspace-notes/">CGSpace Notes</a></h1>
<div class="sns-links hidden-print">
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&nbsp;Home
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@ -71,7 +71,7 @@
</div>
<div class="pull-right">
<span class="post-tag small"><a href="/cgspace-notes//tags/notes">#notes</a></span>
<span class="post-tag small"><a href="https://alanorth.github.io/cgspace-notes//tags/notes">#notes</a></span>
</div>
</div>
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<section>
<h2 id="2016-02-05:124a59adbaa8ef13e1518d003fc03981">2016-02-05</h2>
<h2 id="2016-02-05">2016-02-05</h2>
<ul>
<li>Looking at some DAGRIS data for Abenet Yabowork</li>
@ -94,7 +94,7 @@
<li>Also, lots of things like &ldquo;COTE D`LVOIRE&rdquo; and &ldquo;COTE D IVOIRE&rdquo;</li>
</ul>
<h2 id="2016-02-06:124a59adbaa8ef13e1518d003fc03981">2016-02-06</h2>
<h2 id="2016-02-06">2016-02-06</h2>
<ul>
<li>Found a way to get items with null/empty metadata values from SQL</li>
@ -135,7 +135,7 @@ DELETE 25
<li>Process the empty countries on CGSpace</li>
</ul>
<h2 id="2016-02-07:124a59adbaa8ef13e1518d003fc03981">2016-02-07</h2>
<h2 id="2016-02-07">2016-02-07</h2>
<ul>
<li>Working on cleaning up Abenet&rsquo;s DAGRIS data with OpenRefine</li>
@ -189,7 +189,7 @@ $ /opt/brew/Cellar/tomcat/8.0.30/bin/catalina start
<pre><code>$ ~/dspace/bin/dspace index-discovery -b
</code></pre>
<h2 id="2016-02-08:124a59adbaa8ef13e1518d003fc03981">2016-02-08</h2>
<h2 id="2016-02-08">2016-02-08</h2>
<ul>
<li>Finish cleaning up and importing ~400 DAGRIS items into CGSpace</li>
@ -199,7 +199,7 @@ $ /opt/brew/Cellar/tomcat/8.0.30/bin/catalina start
<p><img src="../images/2016/02/submit-button-ilri.png" alt="ILRI submission buttons" />
<img src="../images/2016/02/submit-button-drylands.png" alt="Drylands submission buttons" /></p>
<h2 id="2016-02-09:124a59adbaa8ef13e1518d003fc03981">2016-02-09</h2>
<h2 id="2016-02-09">2016-02-09</h2>
<ul>
<li>Re-sync DSpace Test with CGSpace</li>
@ -250,7 +250,7 @@ Swap: 255 57 198
<li>So I&rsquo;ll bump up the Tomcat heap to 2048 (CGSpace production server is using 3GB)</li>
</ul>
<h2 id="2016-02-11:124a59adbaa8ef13e1518d003fc03981">2016-02-11</h2>
<h2 id="2016-02-11">2016-02-11</h2>
<ul>
<li>Massaging some CIAT data in OpenRefine</li>
@ -274,7 +274,7 @@ Processing 64195.pdf
&gt; Creating thumbnail for 64195.pdf
</code></pre>
<h2 id="2016-02-12:124a59adbaa8ef13e1518d003fc03981">2016-02-12</h2>
<h2 id="2016-02-12">2016-02-12</h2>
<ul>
<li>Looking at CIAT&rsquo;s records again, there are some problems with a dozen or so files (out of 1200)</li>
@ -285,7 +285,7 @@ Processing 64195.pdf
<li>Also, I&rsquo;m not sure if we import these items, will be remove the <code>dc.identifier.url</code> field from the records?</li>
</ul>
<h2 id="2016-02-12-1:124a59adbaa8ef13e1518d003fc03981">2016-02-12</h2>
<h2 id="2016-02-12-1">2016-02-12</h2>
<ul>
<li>Looking at CIAT&rsquo;s records again, there are some files linking to PDFs on Slide Share, Embrapa, UEA UK, and Condesan, so I&rsquo;m not sure if we can use those</li>
@ -310,7 +310,7 @@ CIAT_COLOMBIA_000169_Técnicas_para_el_aislamiento_y_cultivo_de_protoplastos_de_
<li>They will be deployed on CGSpace the next time I re-deploy</li>
</ul>
<h2 id="2016-02-16:124a59adbaa8ef13e1518d003fc03981">2016-02-16</h2>
<h2 id="2016-02-16">2016-02-16</h2>
<ul>
<li>Turns out OpenRefine has an unescape function!</li>
@ -329,7 +329,7 @@ CIAT_COLOMBIA_000169_Técnicas_para_el_aislamiento_y_cultivo_de_protoplastos_de_
<li>This also works for records that have multiple URLs (separated by &ldquo;||&rdquo;)</li>
</ul>
<h2 id="2016-02-17:124a59adbaa8ef13e1518d003fc03981">2016-02-17</h2>
<h2 id="2016-02-17">2016-02-17</h2>
<ul>
<li>Re-deploy CGSpace, run all system updates, and reboot</li>
@ -338,7 +338,7 @@ CIAT_COLOMBIA_000169_Técnicas_para_el_aislamiento_y_cultivo_de_protoplastos_de_
<li>Need to re-process the filename column to replace multiple underscores with one: <code>value.replace(/_{2,}/, &quot;_&quot;)</code></li>
</ul>
<h2 id="2016-02-20:124a59adbaa8ef13e1518d003fc03981">2016-02-20</h2>
<h2 id="2016-02-20">2016-02-20</h2>
<ul>
<li>Turns out the &ldquo;bug&rdquo; in SAFBuilder isn&rsquo;t a bug, it&rsquo;s a feature that allows you to encode extra information like the destintion bundle in the filename</li>
@ -353,7 +353,7 @@ CIAT_COLOMBIA_000169_Técnicas_para_el_aislamiento_y_cultivo_de_protoplastos_de_
<li>Useful custom text facet for URLs ending with &ldquo;.pdf&rdquo;: <code>value.endsWith(&quot;.pdf&quot;)</code></li>
</ul>
<h2 id="2016-02-22:124a59adbaa8ef13e1518d003fc03981">2016-02-22</h2>
<h2 id="2016-02-22">2016-02-22</h2>
<ul>
<li>To change Spanish accents to ASCII in OpenRefine:</li>
@ -378,7 +378,7 @@ Bitstream: tést señora alimentación.pdf
<li>Running the SAFBuilder on Mac OS X works if you&rsquo;re going to import the resulting bundle on Mac OS X, but if your DSpace is running on Linux you need to run the SAFBuilder there where the filesystem&rsquo;s encoding matches</li>
</ul>
<h2 id="2016-02-29:124a59adbaa8ef13e1518d003fc03981">2016-02-29</h2>
<h2 id="2016-02-29">2016-02-29</h2>
<ul>
<li>Got notified by some CIFOR colleagues that the Google Scholar team had contacted them about CGSpace&rsquo;s incorrect ordering of authors in Google Scholar metadata</li>
@ -420,10 +420,10 @@ Bitstream: tést señora alimentación.pdf
</section>
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